Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc14g12
         (787 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U84750-1|AAB88068.1|  101|Drosophila melanogaster cuticle protei...    30   4.1  
AY113609-1|AAM29614.1|  105|Drosophila melanogaster RH61147p pro...    30   4.1  
AE014296-1086|AAF50685.2|  105|Drosophila melanogaster CG10297-P...    30   4.1  

>U84750-1|AAB88068.1|  101|Drosophila melanogaster cuticle protein
           ACP65A protein.
          Length = 101

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -2

Query: 741 INNAGKVTESIGRHNHDPPTCWMTPDGKSYSLPPLPDKN 625
           +NNAG   ESI          W+ PDG++Y++  + D+N
Sbjct: 55  VNNAGTDNESISIRGS---VTWVAPDGQTYTINFVADEN 90


>AY113609-1|AAM29614.1|  105|Drosophila melanogaster RH61147p
           protein.
          Length = 105

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -2

Query: 741 INNAGKVTESIGRHNHDPPTCWMTPDGKSYSLPPLPDKN 625
           +NNAG   ESI          W+ PDG++Y++  + D+N
Sbjct: 59  VNNAGTDNESISIRGS---VTWVAPDGQTYTINFVADEN 94


>AE014296-1086|AAF50685.2|  105|Drosophila melanogaster CG10297-PA
           protein.
          Length = 105

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -2

Query: 741 INNAGKVTESIGRHNHDPPTCWMTPDGKSYSLPPLPDKN 625
           +NNAG   ESI          W+ PDG++Y++  + D+N
Sbjct: 59  VNNAGTDNESISIRGS---VTWVAPDGQTYTINFVADEN 94


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,160,426
Number of Sequences: 53049
Number of extensions: 700494
Number of successful extensions: 965
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 965
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)