Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14g03
(261 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY075533-1|AAL68340.2| 68|Drosophila melanogaster RH06643p pro... 102 6e-23
AE014297-1040|AAF54450.1| 56|Drosophila melanogaster CG8495-PA... 102 6e-23
BT001305-1|AAN71060.1| 43|Drosophila melanogaster AT13329p pro... 62 1e-10
AE014297-1041|AAN13446.1| 55|Drosophila melanogaster CG8495-PC... 62 1e-10
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 28 1.6
AE013599-629|AAF59106.1| 284|Drosophila melanogaster CG14755-PA... 27 3.6
AY060673-1|AAL28221.3| 446|Drosophila melanogaster GH10523p pro... 27 4.8
AE014297-1276|AAF54621.2| 446|Drosophila melanogaster CG31388-P... 27 4.8
BT025854-1|ABF85754.1| 1031|Drosophila melanogaster IP15264p pro... 26 6.3
AY094796-1|AAM11149.1| 396|Drosophila melanogaster LD22815p pro... 26 6.3
AF145617-1|AAD38592.1| 594|Drosophila melanogaster BcDNA.GH0352... 26 6.3
AE014296-337|AAF47553.2| 881|Drosophila melanogaster CG2086-PB,... 26 6.3
AE014296-336|AAF47552.1| 594|Drosophila melanogaster CG2086-PA,... 26 6.3
AE013599-2215|AAF58045.2| 396|Drosophila melanogaster CG8446-PA... 26 6.3
BT003320-1|AAO25080.1| 798|Drosophila melanogaster AT11823p pro... 26 8.3
AY069327-1|AAL39472.2| 552|Drosophila melanogaster LD04591p pro... 26 8.3
AE014297-4076|AAF56673.2| 980|Drosophila melanogaster CG6051-PA... 26 8.3
>AY075533-1|AAL68340.2| 68|Drosophila melanogaster RH06643p
protein.
Length = 68
Score = 102 bits (245), Expect = 6e-23
Identities = 41/47 (87%), Positives = 44/47 (93%)
Frame = -1
Query: 165 MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYA 25
MG A +WYSHPR+YGQGSR CR+CSNRHGLIRKYGLNICRQCFREYA
Sbjct: 13 MGFATLWYSHPRKYGQGSRCCRACSNRHGLIRKYGLNICRQCFREYA 59
>AE014297-1040|AAF54450.1| 56|Drosophila melanogaster CG8495-PA,
isoform A protein.
Length = 56
Score = 102 bits (245), Expect = 6e-23
Identities = 41/47 (87%), Positives = 44/47 (93%)
Frame = -1
Query: 165 MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYA 25
MG A +WYSHPR+YGQGSR CR+CSNRHGLIRKYGLNICRQCFREYA
Sbjct: 1 MGFATLWYSHPRKYGQGSRCCRACSNRHGLIRKYGLNICRQCFREYA 47
>BT001305-1|AAN71060.1| 43|Drosophila melanogaster AT13329p
protein.
Length = 43
Score = 62.1 bits (144), Expect = 1e-10
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = -1
Query: 102 RSCSNRHGLIRKYGLNICRQCFREYA 25
R+CSNRHGLIRKYGLNICRQCFREYA
Sbjct: 9 RACSNRHGLIRKYGLNICRQCFREYA 34
>AE014297-1041|AAN13446.1| 55|Drosophila melanogaster CG8495-PC,
isoform C protein.
Length = 55
Score = 62.1 bits (144), Expect = 1e-10
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = -1
Query: 102 RSCSNRHGLIRKYGLNICRQCFREYA 25
R+CSNRHGLIRKYGLNICRQCFREYA
Sbjct: 21 RACSNRHGLIRKYGLNICRQCFREYA 46
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 54 CSNRTCGLSHACWSRIGMTEIL 119
C+N+ CGL+ AC +R G E L
Sbjct: 1437 CANKPCGLNAACLNRAGGFECL 1458
>AE013599-629|AAF59106.1| 284|Drosophila melanogaster CG14755-PA
protein.
Length = 284
Score = 27.1 bits (57), Expect = 3.6
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 130 ARVRIPNICVAHFKKLNCFSLTSNKLDT 213
+R + N+C+ HF+ NC NK ++
Sbjct: 254 SRTALLNLCITHFRLSNCSDSGQNKSES 281
>AY060673-1|AAL28221.3| 446|Drosophila melanogaster GH10523p
protein.
Length = 446
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1
Query: 135 PRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFR 34
P+ Y S CR+ H L R +G ICR F+
Sbjct: 377 PKSYVTPSE-CRTHQKYHNLTRDHGCEICRISFK 409
>AE014297-1276|AAF54621.2| 446|Drosophila melanogaster CG31388-PA
protein.
Length = 446
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1
Query: 135 PRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFR 34
P+ Y S CR+ H L R +G ICR F+
Sbjct: 377 PKSYVTPSE-CRTHQKYHNLTRDHGCEICRISFK 409
>BT025854-1|ABF85754.1| 1031|Drosophila melanogaster IP15264p
protein.
Length = 1031
Score = 26.2 bits (55), Expect = 6.3
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +3
Query: 9 ESYVMEHTL*STVCICSNRTCGLSHACWSRIGMT 110
E + EH + + C +N C +H C R G T
Sbjct: 743 EGFYGEHCMNTCACPSANFQCHAAHGCVCRSGYT 776
>AY094796-1|AAM11149.1| 396|Drosophila melanogaster LD22815p
protein.
Length = 396
Score = 26.2 bits (55), Expect = 6.3
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -1
Query: 117 GSRSCRSCSNRHGLIRKYGLNI-CRQCFREYA 25
G+ +C S R RKY LNI R FRE+A
Sbjct: 138 GNLNCTFFSPRERYDRKYNLNIVTRALFREWA 169
>AF145617-1|AAD38592.1| 594|Drosophila melanogaster BcDNA.GH03529
protein.
Length = 594
Score = 26.2 bits (55), Expect = 6.3
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +3
Query: 9 ESYVMEHTL*STVCICSNRTCGLSHACWSRIGMT 110
E + EH + + C +N C +H C R G T
Sbjct: 295 EGFYGEHCMNTCACPSANFQCHAAHGCVCRSGYT 328
>AE014296-337|AAF47553.2| 881|Drosophila melanogaster CG2086-PB,
isoform B protein.
Length = 881
Score = 26.2 bits (55), Expect = 6.3
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +3
Query: 9 ESYVMEHTL*STVCICSNRTCGLSHACWSRIGMT 110
E + EH + + C +N C +H C R G T
Sbjct: 582 EGFYGEHCMNTCACPSANFQCHAAHGCVCRSGYT 615
>AE014296-336|AAF47552.1| 594|Drosophila melanogaster CG2086-PA,
isoform A protein.
Length = 594
Score = 26.2 bits (55), Expect = 6.3
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +3
Query: 9 ESYVMEHTL*STVCICSNRTCGLSHACWSRIGMT 110
E + EH + + C +N C +H C R G T
Sbjct: 295 EGFYGEHCMNTCACPSANFQCHAAHGCVCRSGYT 328
>AE013599-2215|AAF58045.2| 396|Drosophila melanogaster CG8446-PA
protein.
Length = 396
Score = 26.2 bits (55), Expect = 6.3
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -1
Query: 117 GSRSCRSCSNRHGLIRKYGLNI-CRQCFREYA 25
G+ +C S R RKY LNI R FRE+A
Sbjct: 138 GNLNCTFFSPRERYDRKYNLNIVTRALFREWA 169
>BT003320-1|AAO25080.1| 798|Drosophila melanogaster AT11823p
protein.
Length = 798
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 4/31 (12%)
Frame = -1
Query: 117 GSRSCRSCSNRHGLIRKYGL----NICRQCF 37
G C CSN + KYGL +CR C+
Sbjct: 744 GGVFCGVCSNASAPLPKYGLTKAVRVCRDCY 774
>AY069327-1|AAL39472.2| 552|Drosophila melanogaster LD04591p
protein.
Length = 552
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 4/31 (12%)
Frame = -1
Query: 117 GSRSCRSCSNRHGLIRKYGL----NICRQCF 37
G C CSN + KYGL +CR C+
Sbjct: 498 GGVFCGVCSNASAPLPKYGLTKAVRVCRDCY 528
>AE014297-4076|AAF56673.2| 980|Drosophila melanogaster CG6051-PA
protein.
Length = 980
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 4/31 (12%)
Frame = -1
Query: 117 GSRSCRSCSNRHGLIRKYGL----NICRQCF 37
G C CSN + KYGL +CR C+
Sbjct: 926 GGVFCGVCSNASAPLPKYGLTKAVRVCRDCY 956
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,089,598
Number of Sequences: 53049
Number of extensions: 233898
Number of successful extensions: 703
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of database: 24,988,368
effective HSP length: 65
effective length of database: 21,540,183
effective search space used: 452343843
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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