Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc14f21
         (460 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.     23   3.9  
AJ304412-1|CAC39105.1|  196|Anopheles gambiae dynamin protein.         23   3.9  
AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.    23   3.9  
AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450 pr...    23   5.1  
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    23   5.1  
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    23   5.1  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    22   9.0  

>AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.
          Length = 603

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 124 SPRPVREEEAHAQTSVKNVRTE 59
           +PR + E E H   SV+N+  E
Sbjct: 515 TPRQIAENELHQYLSVENIDLE 536


>AJ304412-1|CAC39105.1|  196|Anopheles gambiae dynamin protein.
          Length = 196

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 11/51 (21%), Positives = 23/51 (45%)
 Frame = -2

Query: 375 TRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFG 223
           T+ F+   LLA      D     + +  + + RE++ +MY    + + + G
Sbjct: 132 TKDFINGELLAHLYATGDQASMMEESADEAQKREEMLRMYHACKEALRIIG 182


>AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.
          Length = 115

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 12/40 (30%), Positives = 16/40 (40%)
 Frame = +3

Query: 51  LLHSVLTFFTLVCAWASSSRTGRGELTCAWVRTSWPDRVC 170
           LL SV+ +      W    +   G L C  V T   +R C
Sbjct: 18  LLESVVPYAAAEKVWVDRDKVYCGHLDCTRVATFKGERFC 57


>AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -2

Query: 306 KPTVSKTEIREKLAKMYKVTPDVVFVFGFK 217
           KPT+    I EKL K  K   D V ++ F+
Sbjct: 49  KPTIHFAYIIEKLYKRLKSKGDYVGIYFFR 78


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 174 YDTLDLAKKFEPKHRLAR 121
           Y TL+L K+F   H L R
Sbjct: 229 YQTLELEKEFHTNHYLTR 246


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 174 YDTLDLAKKFEPKHRLAR 121
           Y TL+L K+F   H L R
Sbjct: 246 YQTLELEKEFHTNHYLTR 263


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 10  LEAAPTLDFLVPRTFFILFLRSLRWFA 90
           LE  P + FLV    +++F+  ++W A
Sbjct: 567 LEFLPQIIFLVLLFAYMVFMMFMKWIA 593


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 510,233
Number of Sequences: 2352
Number of extensions: 10068
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39544623
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)