Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14f19
(698 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O10370 Cluster: Uncharacterized 55.8 kDa protein; n=13;... 285 7e-76
UniRef50_Q0N488 Cluster: P49; n=15; Nucleopolyhedrovirus|Rep: P4... 194 2e-48
UniRef50_Q0ILA8 Cluster: ORF11; n=2; Nucleopolyhedrovirus|Rep: O... 146 6e-34
UniRef50_Q6QXD1 Cluster: ORF12; n=1; Agrotis segetum granuloviru... 117 2e-25
UniRef50_Q9PZ30 Cluster: ORF13; n=2; Xestia c-nigrum granuloviru... 111 2e-23
UniRef50_Q91F31 Cluster: ORF15 P49; n=4; Granulovirus|Rep: ORF15... 104 2e-21
UniRef50_Q9DW16 Cluster: PxORF14 peptide; n=1; Plutella xylostel... 102 1e-20
UniRef50_A5IZL3 Cluster: P49; n=1; Spodoptera litura granuloviru... 101 2e-20
UniRef50_Q7TA04 Cluster: ORF_11; n=1; Adoxophyes orana granulovi... 92 1e-17
UniRef50_Q8JS46 Cluster: P49; n=1; Phthorimaea operculella granu... 81 3e-14
UniRef50_Q6JPA8 Cluster: Putative uncharacterized protein; n=3; ... 46 0.001
UniRef50_Q8IHP8 Cluster: Putative uncharacterized protein; n=2; ... 34 2.9
UniRef50_UPI000049903A Cluster: protein kinase; n=2; Entamoeba h... 33 5.1
UniRef50_A4AQE6 Cluster: Putative uncharacterized protein; n=2; ... 33 6.7
UniRef50_Q8S9M3 Cluster: At2g45480/F4L23.1; n=4; Arabidopsis tha... 33 6.7
UniRef50_Q7RJ94 Cluster: Putative uncharacterized protein PY0336... 33 6.7
UniRef50_Q6BFF0 Cluster: Guanylate nucleotide binding protein, p... 33 6.7
UniRef50_A0D4M8 Cluster: Chromosome undetermined scaffold_38, wh... 33 6.7
UniRef50_A4VRE5 Cluster: Predicted non-heme iron hydroxylase Mpp... 33 8.9
>UniRef50_O10370 Cluster: Uncharacterized 55.8 kDa protein; n=13;
Nucleopolyhedrovirus|Rep: Uncharacterized 55.8 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 484
Score = 285 bits (699), Expect = 7e-76
Identities = 124/170 (72%), Positives = 150/170 (88%), Gaps = 1/170 (0%)
Frame = -3
Query: 525 LNCTFDLLDDAVLMNYFNYLQSMQLKHLVGSTST-NIFKFVKPQFRFVCNRTTVDILEFD 349
L+C F +LDDA L NY YL+S+QL+H+VG T +++KF+KPQFRFVC+R TVDILEFD
Sbjct: 43 LDCNFRVLDDATLQNYTGYLRSIQLRHMVGGLLTPDVYKFIKPQFRFVCDRATVDILEFD 102
Query: 348 TRMYIKPGTHVYATNLFTSNPRKMMAFLYAEFGKVFKNKIFVNINNYGCVLAGSAGFLFD 169
+RMYIKPGT VYATNLFTSNPRKM +F+Y+EF KV+KN++F N N+GCVLAG+AGF+F+
Sbjct: 103 SRMYIKPGTPVYATNLFTSNPRKMTSFIYSEFTKVYKNRLFANTTNHGCVLAGAAGFVFE 162
Query: 168 DAYVDWNGVRMCAAPRLDNNMHPFRLYLLGEDMAKHFVDNNILPPHPSNA 19
DAYVDW+GVRMCAAPRLDNN HPFRLYLLGE+MA HFV +NILPPHP+NA
Sbjct: 163 DAYVDWSGVRMCAAPRLDNNRHPFRLYLLGEEMAAHFVAHNILPPHPANA 212
Score = 61.7 bits (143), Expect = 2e-08
Identities = 27/42 (64%), Positives = 31/42 (73%)
Frame = -2
Query: 646 GGNLLTLERDHFKYLFLTSYFDLKDNEHVPSEPMAFIRNYFE 521
G NL+ L +D FKYLFL SYFDLKD HVP+E AFI NY +
Sbjct: 3 GNNLIALAQDQFKYLFLGSYFDLKDFSHVPAEAKAFIGNYLD 44
>UniRef50_Q0N488 Cluster: P49; n=15; Nucleopolyhedrovirus|Rep: P49 -
Clanis bilineata nucleopolyhedrosis virus
Length = 498
Score = 194 bits (473), Expect = 2e-48
Identities = 78/164 (47%), Positives = 116/164 (70%)
Frame = -3
Query: 534 ATILNCTFDLLDDAVLMNYFNYLQSMQLKHLVGSTSTNIFKFVKPQFRFVCNRTTVDILE 355
A L FD LD+ VL+ + +Y+ M+L+ + + N+FKF+KPQF+++CN+ DILE
Sbjct: 46 AEYLRNNFDRLDENVLLKFIDYISEMKLRFAINDRTVNMFKFIKPQFKYICNKDNTDILE 105
Query: 354 FDTRMYIKPGTHVYATNLFTSNPRKMMAFLYAEFGKVFKNKIFVNINNYGCVLAGSAGFL 175
FD ++Y++P T +YATN F PRK LY EF KV N+ FV C++ G+ G++
Sbjct: 106 FDDKIYVQPETPIYATNFFVREPRKFRIVLYQEFSKVLDNRQFVTNYETYCLINGNVGYI 165
Query: 174 FDDAYVDWNGVRMCAAPRLDNNMHPFRLYLLGEDMAKHFVDNNI 43
FDD+Y+DW GVRMC+APR++ N++P+RLYL+G+ MA HF++NNI
Sbjct: 166 FDDSYIDWCGVRMCSAPRIEGNLYPYRLYLVGDLMANHFIENNI 209
Score = 37.9 bits (84), Expect = 0.24
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = -2
Query: 631 TLERDHFKYLFLTSYFDLKDNEHVPSEPMAFIRNY 527
TLE H KYLFL SYF L + E +E FI Y
Sbjct: 14 TLETRHLKYLFLASYFRLSEYEKFSTESEPFIAEY 48
>UniRef50_Q0ILA8 Cluster: ORF11; n=2; Nucleopolyhedrovirus|Rep:
ORF11 - Leucania separata nuclear polyhedrosis virus
(LsNPV)
Length = 470
Score = 146 bits (353), Expect = 6e-34
Identities = 67/165 (40%), Positives = 103/165 (62%), Gaps = 2/165 (1%)
Frame = -3
Query: 528 ILNCTFDLLDDAVLMNYFNYLQSMQLKHLVGSTSTNIFKFVKPQFRFVCNRTTVDILEFD 349
+LN F +++D L+ Y +YL ++LKHLV S N+FK++KPQF+F+C R + I++
Sbjct: 45 VLN-NFRVINDDTLLKYLDYLHEIRLKHLVTDRSPNVFKYIKPQFKFICTRHHLSIMKIS 103
Query: 348 TRMYIKPGTHVYATNLFTSNPRKMMAFLYAEFGKVFK-NKIFVNINNYGCVLAGSAGFLF 172
+++KP T +YATN F ++ R+ +Y F VFK N+ F+N VL G G++F
Sbjct: 104 RGVFLKPNTTIYATNFFVTDDREFSVVMYKLFTGVFKNNRQFINNEMRHVVLGGQDGYVF 163
Query: 171 DDAYVDWNGVRMCAAPRLD-NNMHPFRLYLLGEDMAKHFVDNNIL 40
AY+DW+G +MC N P+RLYL+GE MA+ F+ NI+
Sbjct: 164 APAYIDWSGHQMCQVDNYHANRTFPYRLYLIGEQMAQLFIKENIM 208
Score = 47.2 bits (107), Expect = 4e-04
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = -2
Query: 640 NLLTLERDHFKYLFLTSYFDLKDNEHVPSEPMAFIRNY 527
NLL+LER+ KYLFL +YFDL D + + E FIR +
Sbjct: 7 NLLSLERNQLKYLFLATYFDLADTQRLADETKPFIREF 44
>UniRef50_Q6QXD1 Cluster: ORF12; n=1; Agrotis segetum
granulovirus|Rep: ORF12 - Agrotis segetum granulosis
virus (AsGV) (Agrotis segetumgranulovirus)
Length = 446
Score = 117 bits (282), Expect = 2e-25
Identities = 61/174 (35%), Positives = 106/174 (60%), Gaps = 2/174 (1%)
Frame = -3
Query: 558 LQSRWHLFATILNCTFDLLDDAVLMNYFNYLQSMQLKHLVGSTSTNIFKFVKPQFRFVCN 379
L R HL + + + ++ V+ +Y +YL MQLK++V S ++FK++KPQF++VC
Sbjct: 17 LDQRDHLNSDVRRFLNEPSEEDVI-SYLDYLDRMQLKNIVVDKSADLFKYIKPQFKYVCE 75
Query: 378 RT-TVDILEFD-TRMYIKPGTHVYATNLFTSNPRKMMAFLYAEFGKVFKNKIFVNINNYG 205
R +DI++++ + ++++ G VYATNLF +P ++F +FG K + +I
Sbjct: 76 REYDLDIVKYNYSGVFLRKGAVVYATNLFVVDPSDTISFFITKFG---IEKGYTSIEEKH 132
Query: 204 CVLAGSAGFLFDDAYVDWNGVRMCAAPRLDNNMHPFRLYLLGEDMAKHFVDNNI 43
V G+ G F AY+DW G+++C+ + + H +RLY++GE MA+ F+ NNI
Sbjct: 133 VVCNGTDGVFFGRAYLDWLGLKVCSGNKYREDEH-YRLYIIGEHMAQQFIQNNI 185
>UniRef50_Q9PZ30 Cluster: ORF13; n=2; Xestia c-nigrum
granulovirus|Rep: ORF13 - Xestia c-nigrum granulosis
virus (XnGV) (Xestia c-nigrumgranulovirus)
Length = 453
Score = 111 bits (266), Expect = 2e-23
Identities = 61/159 (38%), Positives = 89/159 (55%), Gaps = 4/159 (2%)
Frame = -3
Query: 498 DAVLMNYFNYLQSMQLKHLVGST-STNIFKFVKPQFRFVCNRTT-VDILEFDTRMYIKPG 325
D L+ Y YL M L +G T S ++FK+VKPQF F C R +DI+ Y++
Sbjct: 40 DEDLLRYLQYLSGMGLHGFIGDTNSVDLFKYVKPQFHFECVRDQDLDIVRHTNDFYLRKH 99
Query: 324 THVYATNLFTSNP--RKMMAFLYAEFGKVFKNKIFVNINNYGCVLAGSAGFLFDDAYVDW 151
T VYATNLF +P +K + + + V ++ + NNY V G G++F Y+DW
Sbjct: 100 TSVYATNLFVRDPVKQKWLLKIMVDVMNVHEHAAALG-NNY-MVYDGCVGYVFAKPYLDW 157
Query: 150 NGVRMCAAPRLDNNMHPFRLYLLGEDMAKHFVDNNILPP 34
+G R+CA+ N +RLYL+G+++ K F D NI PP
Sbjct: 158 SGTRVCASDVERTNTTMYRLYLVGQELLKIFTDKNIQPP 196
>UniRef50_Q91F31 Cluster: ORF15 P49; n=4; Granulovirus|Rep: ORF15
P49 - Cydia pomonella granulosis virus (CpGV) (Cydia
pomonellagranulovirus)
Length = 457
Score = 104 bits (249), Expect = 2e-21
Identities = 57/147 (38%), Positives = 88/147 (59%), Gaps = 6/147 (4%)
Frame = -3
Query: 474 NYLQSMQLKHLVGSTSTNIFKFVKPQFRFVCNRT-TVDILEFDT-RMYIKPGTHVYATNL 301
NYL +QLK++VG + + FK+V PQFR+VC+R + I++FD ++Y+K G+ VYATNL
Sbjct: 46 NYLSGIQLKYMVGDATADTFKYVMPQFRYVCDRDYHLQIVKFDAGKVYLKKGSVVYATNL 105
Query: 300 FTSNPRKMMAFL--YAEFGKVFKNKI-FVNINNYGCVLAGSAGFLFDDAYVDWNGVRMC- 133
F NP M +L G+ F N+ + + G G + Y+DW G+++C
Sbjct: 106 FVQNPSAAMDYLLRVPAVGEYFLNRTESAAVGGKFYMWNGEEGVVVARPYLDWMGMKICN 165
Query: 132 AAPRLDNNMHPFRLYLLGEDMAKHFVD 52
AP +N +R+YLLGE +AK F++
Sbjct: 166 GAPHTENKW--YRVYLLGETVAKLFIE 190
>UniRef50_Q9DW16 Cluster: PxORF14 peptide; n=1; Plutella xylostella
granulovirus|Rep: PxORF14 peptide - Plutella xylostella
granulovirus
Length = 446
Score = 102 bits (244), Expect = 1e-20
Identities = 57/164 (34%), Positives = 95/164 (57%), Gaps = 6/164 (3%)
Frame = -3
Query: 510 DLLDDAVLMNYFNYLQSMQLKHLVGSTSTNIFKFVKPQFRFVCNRT-TVDILEFD-TRMY 337
D DD + + Y NYL M +K+++ S + FK++ PQFRFVC+R VDI++ D +++
Sbjct: 37 DYTDDDIRL-YINYLADMNIKNILLDYSVDTFKYIMPQFRFVCDRDYNVDIVKHDYGKIF 95
Query: 336 IKPGTHVYATNLFTSNPRKMMAFLYAEFGKVFKNKI-FVNINNYGCVLAGSAGFLFDDAY 160
I+ T V+ATN F P +++E+ F NK V ++N + G +G +F Y
Sbjct: 96 IRKNTPVFATNYFFDLPENFDIGIFSEY---FVNKTEQVAVSNKHMISNGDSGVVFGPPY 152
Query: 159 VDWNGVRMCAAPRLDNNMHP---FRLYLLGEDMAKHFVDNNILP 37
DW+G+++C + L + +RLYL+GE+MA + + I+P
Sbjct: 153 YDWSGLKVCKSNNLKALVRDEDFYRLYLIGEEMANYVMTKKIVP 196
Score = 33.1 bits (72), Expect = 6.7
Identities = 23/94 (24%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Frame = -2
Query: 634 LTLERDHFKYLFLTSYFDLKDNEHVPSEPMA-FIR-NYFELHV-*FARRCRAHELFQLLA 464
+ + +D KY+F+ SYF + D+E V P+ F+R +Y + + + + +L
Sbjct: 1 MAITQDMLKYIFINSYFRITDDEPVLPRPVTQFLRGDYTDDDIRLYINYLADMNIKNILL 60
Query: 463 KHAVETFGGQHVDKHFQ-VCKATISICVQSHNCG 365
++V+TF +++ F+ VC ++ + H+ G
Sbjct: 61 DYSVDTF--KYIMPQFRFVCDRDYNVDIVKHDYG 92
>UniRef50_A5IZL3 Cluster: P49; n=1; Spodoptera litura
granulovirus|Rep: P49 - Spodoptera litura granulovirus
Length = 456
Score = 101 bits (241), Expect = 2e-20
Identities = 53/149 (35%), Positives = 85/149 (57%), Gaps = 3/149 (2%)
Frame = -3
Query: 480 YFNYLQSMQLKHLVGS-TSTNIFKFVKPQFRFVCNRTT-VDILEFDTR-MYIKPGTHVYA 310
Y +YL M+L ++G ++FK++KPQFRF C R +DI+++D R +I+ T+V+A
Sbjct: 47 YLDYLIEMKLHGVLGDKVGADMFKYIKPQFRFECKREPELDIIKYDDREFFIRKNTNVFA 106
Query: 309 TNLFTSNPRKMMAFLYAEFGKVFKNKIFVNINNYGCVLAGSAGFLFDDAYVDWNGVRMCA 130
TNLF +NP +L N V I+ ++ G+ G++F Y+DW G+R+C+
Sbjct: 107 TNLFVNNPSDHKLWLGKILKSALTNLDGVVISERSMIVNGTDGYVFAAPYMDWQGIRVCS 166
Query: 129 APRLDNNMHPFRLYLLGEDMAKHFVDNNI 43
+RLY+LG + +F DNNI
Sbjct: 167 Y----REHSSYRLYILGTVVCSYFTDNNI 191
>UniRef50_Q7TA04 Cluster: ORF_11; n=1; Adoxophyes orana
granulovirus|Rep: ORF_11 - Adoxophyes orana granulovirus
(AoGV)
Length = 459
Score = 92.3 bits (219), Expect = 1e-17
Identities = 50/143 (34%), Positives = 85/143 (59%), Gaps = 3/143 (2%)
Frame = -3
Query: 486 MNYFNYLQSMQLKHLVGSTSTNIFKFVKPQFRFVCNRT-TVDILEF-DTRMYIKPGTHVY 313
+ NY+QS++L+++V + ++F++V PQFRFVC R +DI++ + + +I G VY
Sbjct: 39 LKIINYIQSIRLRNVVSDFTEDMFEYVTPQFRFVCERDYNLDIVKIKNHKFFIPKGASVY 98
Query: 312 ATNLFTSNPRKMMAFLYAEFGKVFKNKIFVNINNYGCVLA-GSAGFLFDDAYVDWNGVRM 136
ATNL S+ K M ++ + K K VN++ CV S G LF Y+DW G+++
Sbjct: 99 ATNLLVSDVDKAMMEIFKLTNLIDKTKT-VNVSKKYCVSTDNSEGVLFARPYLDWMGLKV 157
Query: 135 CAAPRLDNNMHPFRLYLLGEDMA 67
C + + + +RLY++GE +A
Sbjct: 158 CEGATYNQDDY-YRLYVVGEQLA 179
>UniRef50_Q8JS46 Cluster: P49; n=1; Phthorimaea operculella
granulovirus|Rep: P49 - Phthorimaea operculella
granulovirus
Length = 426
Score = 81.0 bits (191), Expect = 3e-14
Identities = 51/145 (35%), Positives = 78/145 (53%), Gaps = 4/145 (2%)
Frame = -3
Query: 474 NYLQSMQLKHLVGSTSTNIFKFVKPQFRFVCNRT-TVDILEF-DTRMYIKPGTHVYATNL 301
+Y+ M+L +++G + F V PQFRFVC R ++I+ +T Y++ G VYATNL
Sbjct: 41 DYISQMRLHNMIGESFD--FNRVLPQFRFVCERDYKLEIVRHNETGAYLRKGVPVYATNL 98
Query: 300 FTSNPRKMMAFLYAEFGKV--FKNKIFVNINNYGCVLAGSAGFLFDDAYVDWNGVRMCAA 127
F+ N + ++ K +KN V I + G GF+ Y+DW G+++CA
Sbjct: 99 FSLNEGTLTDYMMNTIMKNNDWKNDNCVIITATMYLCDGRDGFIVGSPYIDWKGMKLCAG 158
Query: 126 PRLDNNMHPFRLYLLGEDMAKHFVD 52
+N RLYL+GE M K FV+
Sbjct: 159 TSQNNYT---RLYLVGERMTKIFVE 180
>UniRef50_Q6JPA8 Cluster: Putative uncharacterized protein; n=3;
Nucleopolyhedrovirus|Rep: Putative uncharacterized
protein - Neodiprion lecontii NPV
Length = 442
Score = 45.6 bits (103), Expect = 0.001
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 2/151 (1%)
Frame = -3
Query: 504 LDDAVLMNYFNYLQSMQLKHLVGSTSTNIFKFVKPQFRFVCNRTTVDILEFDTRMYIKPG 325
LD + Y +Y+ + L + T T F K + L + ++I+ G
Sbjct: 43 LDQKTVDRYVDYVNMLGLTNY--KTVTKPFIANKLHIEQIVTYDVQSKLFVENSLHIENG 100
Query: 324 THVYATNLFTSNPRKMMAFLYAEFGKVFKNKIFVNINNYG--CVLAGSAGFLFDDAYVDW 151
T +Y TN + N + + A+ F+ K N+ + G+ G++FD DW
Sbjct: 101 TPIYCTNCYVENVSDLKT-ITADLYLKFREKYSHQGGNFAHAAIHNGNFGYVFDIVSHDW 159
Query: 150 NGVRMCAAPRLDNNMHPFRLYLLGEDMAKHF 58
+C + + +P RLYL GE++ +F
Sbjct: 160 KSESIC-----NFDTYPKRLYLFGENVVDYF 185
>UniRef50_Q8IHP8 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 2755
Score = 34.3 bits (75), Expect = 2.9
Identities = 27/106 (25%), Positives = 54/106 (50%)
Frame = -3
Query: 519 CTFDLLDDAVLMNYFNYLQSMQLKHLVGSTSTNIFKFVKPQFRFVCNRTTVDILEFDTRM 340
C+ ++L+D ++MN N+L++++ K G+T +I K + + + N+ E T
Sbjct: 424 CSNNMLNDHLVMNNKNFLEAIKTK---GNTHYDINKLYRYESKEYENKKIRFRSENKTTD 480
Query: 339 YIKPGTHVYATNLFTSNPRKMMAFLYAEFGKVFKNKIFVNINNYGC 202
++ +++ N F+ N LY+E GK++ +K N N C
Sbjct: 481 KVEE-SYLLNKNSFSKNMMNNYNGLYSENGKIWTSKENTNTFNGTC 525
>UniRef50_UPI000049903A Cluster: protein kinase; n=2; Entamoeba
histolytica HM-1:IMSS|Rep: protein kinase - Entamoeba
histolytica HM-1:IMSS
Length = 386
Score = 33.5 bits (73), Expect = 5.1
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -2
Query: 643 GNLLTLERDHF-KYLFLTSYFDLKDNEHVPSEPMAFIRNYFELHV 512
G TLE DH +++ L YF+ K P+ P F RNY H+
Sbjct: 286 GKTFTLEEDHLAQFIELLGYFNKKYLNIAPNTPKYFTRNYELKHI 330
>UniRef50_A4AQE6 Cluster: Putative uncharacterized protein; n=2;
Flavobacteriales|Rep: Putative uncharacterized protein -
Flavobacteriales bacterium HTCC2170
Length = 297
Score = 33.1 bits (72), Expect = 6.7
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = -3
Query: 354 FDTRMYIKPGTHVYATNLFTSNPRKMMAFLYAEFGKVFKNKIFVNIN-NYGCVLAGSAGF 178
+DT MY Y T + +P + MA+ + E KV+K++ F++ + Y VL G
Sbjct: 46 YDTSMYTDTSKTFYNTKKNSMSPSETMAY-HQETDKVYKSRGFLDEDQEYEMVLTDD-GN 103
Query: 177 LFDDAYVDWNG 145
+ + ++DW G
Sbjct: 104 TWVNCWLDWKG 114
>UniRef50_Q8S9M3 Cluster: At2g45480/F4L23.1; n=4; Arabidopsis
thaliana|Rep: At2g45480/F4L23.1 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 431
Score = 33.1 bits (72), Expect = 6.7
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 65 LAMSSPSRYNRNGCMLLSNRGAAHIRT 145
LA+SS S YN + LLSN+G HI T
Sbjct: 61 LALSSSSNYNYHSSSLLSNKGVTHIDT 87
>UniRef50_Q7RJ94 Cluster: Putative uncharacterized protein PY03369;
n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY03369 - Plasmodium yoelii yoelii
Length = 625
Score = 33.1 bits (72), Expect = 6.7
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = -3
Query: 420 IFKFVKPQFRFVCNRTTVDILEFDTRMYIKPGTHV---YATNLFTSNPRKMMAFLYAEFG 250
I+K+ K + + N TT DI+ + YI G +V Y +L S + +L
Sbjct: 504 IYKYNKLKLLQLLNETTSDIVNY----YISKGLYVRDYYFNSLIFSKKFTFLNYLLEYIT 559
Query: 249 KVFKNKIFVNIN 214
+ FKNKI +N N
Sbjct: 560 RHFKNKININFN 571
>UniRef50_Q6BFF0 Cluster: Guanylate nucleotide binding protein,
putative; n=3; Paramecium tetraurelia|Rep: Guanylate
nucleotide binding protein, putative - Paramecium
tetraurelia
Length = 1602
Score = 33.1 bits (72), Expect = 6.7
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 280 FTRIGRKQVRGVHVRAGLYVHARVKF*N-VHSCAIAHKSKLWLYKLENVCRRAAHQMFQL 456
F+++ KQ RG + G+Y++ + ++S +A W Y CR+ + F++
Sbjct: 268 FSKVKPKQFRGKTLTGGMYINLINSYLQAMNSGCVATIESSWTYVFREECRKLQAEAFEI 327
Query: 457 HALQVIE 477
+ Q+ E
Sbjct: 328 YEKQIKE 334
>UniRef50_A0D4M8 Cluster: Chromosome undetermined scaffold_38, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_38,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 322
Score = 33.1 bits (72), Expect = 6.7
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Frame = -3
Query: 495 AVLMNYFNYLQSMQLKHLVGSTST-NIFKFVKPQFRFVCNRT----TVDILEFDTRMYIK 331
++L + Q +Q +H+ +ST + QFR + +R ++ L+F+T
Sbjct: 14 SLLQQLYIVEQQIQEQHVTIQSSTYTLVSLFHAQFRQLIDREDIIDSIQQLDFETPQLFN 73
Query: 330 PGTHVYATNLFTSNPRKMMAFL----YAEFGKVFKNKIFVNINNYGCVLAGSAG 181
G ++ + FTSN + ++ + Y F F F I N C+LA + G
Sbjct: 74 MGRNLQSEFAFTSNHKYILKVVSGTQYRYFKNTFHQYYFKIIANKSCLLARTFG 127
>UniRef50_A4VRE5 Cluster: Predicted non-heme iron hydroxylase MppO;
n=1; Pseudomonas stutzeri A1501|Rep: Predicted non-heme
iron hydroxylase MppO - Pseudomonas stutzeri (strain
A1501)
Length = 293
Score = 32.7 bits (71), Expect = 8.9
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 80 PSRYNRNGCMLLSNRGAAHIRTPFQSTYASSNK 178
P R NR +++ NR AH R+PF + + S++
Sbjct: 235 PVRLNRGDLLIIDNRRTAHARSPFSARFDGSDR 267
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 717,680,966
Number of Sequences: 1657284
Number of extensions: 14874145
Number of successful extensions: 36513
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 35170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36470
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -