Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc14f16
         (556 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    27   0.55 
AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembran...    27   0.55 
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    27   0.55 
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   5.1  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   6.7  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   8.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   8.9  

>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 26.6 bits (56), Expect = 0.55
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
 Frame = +2

Query: 107 VIYFCTQNIELVMIS----SFDSVNFY*NTLCNFFIYFLFQLQTFCSF 238
           +++  T  I+L +++      D VN Y  T+  +  Y L Q+  FC F
Sbjct: 356 LLHMLTSTIKLTLLAYQATKIDGVNVYGLTVIGYLCYALAQVFLFCIF 403


>AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 331

 Score = 26.6 bits (56), Expect = 0.55
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
 Frame = +2

Query: 107 VIYFCTQNIELVMIS----SFDSVNFY*NTLCNFFIYFLFQLQTFCSF 238
           +++  T  I+L +++      D VN Y  T+  +  Y L Q+  FC F
Sbjct: 209 LLHMLTSTIKLTLLAYQATKIDGVNVYGLTVIGYLCYALAQVFLFCIF 256


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 26.6 bits (56), Expect = 0.55
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
 Frame = +2

Query: 107 VIYFCTQNIELVMIS----SFDSVNFY*NTLCNFFIYFLFQLQTFCSF 238
           +++  T  I+L +++      D VN Y  T+  +  Y L Q+  FC F
Sbjct: 356 LLHMLTSTIKLTLLAYQATKIDGVNVYGLTVIGYLCYALAQVFLFCIF 403


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +3

Query: 456 YLLPLGHGACSNRSYCVLFATVVQKKVA 539
           Y  P+ HGA +NR  C      VQ+K A
Sbjct: 804 YAAPVWHGALTNRE-CRSLLKRVQRKAA 830


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 130 ILCAKINDIIF*TCFTS 80
           I  A+IND++F  C+ S
Sbjct: 75  IAAARINDVLFICCYVS 91


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 50   SQTWFYTYNSAGK 88
            S   +YTYNS GK
Sbjct: 1921 SNVMYYTYNSVGK 1933


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 50   SQTWFYTYNSAGK 88
            S   +YTYNS GK
Sbjct: 1922 SNVMYYTYNSVGK 1934


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 559,506
Number of Sequences: 2352
Number of extensions: 10179
Number of successful extensions: 20
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51722361
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)