Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc14f14
         (774 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL031027-3|CAA19840.1|  256|Drosophila melanogaster EG:80H7.2 pr...    29   9.4  
AE014298-217|ABC67163.1|  136|Drosophila melanogaster CG14779-PD...    29   9.4  
AE014298-216|AAG22385.2|  256|Drosophila melanogaster CG14779-PC...    29   9.4  
AE014298-215|AAF45632.1|  256|Drosophila melanogaster CG14779-PA...    29   9.4  

>AL031027-3|CAA19840.1|  256|Drosophila melanogaster EG:80H7.2
           protein.
          Length = 256

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 178 VISFYREYWIEIYKEILKKCLIVNFGLTPFCF 83
           ++SF   YWIE Y+E   +    N GL  +CF
Sbjct: 44  MMSFCSPYWIESYEE--TRASFKNMGLWQYCF 73


>AE014298-217|ABC67163.1|  136|Drosophila melanogaster CG14779-PD,
           isoform D protein.
          Length = 136

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 178 VISFYREYWIEIYKEILKKCLIVNFGLTPFCF 83
           ++SF   YWIE Y+E   +    N GL  +CF
Sbjct: 44  MMSFCSPYWIESYEE--TRASFKNMGLWQYCF 73


>AE014298-216|AAG22385.2|  256|Drosophila melanogaster CG14779-PC,
           isoform C protein.
          Length = 256

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 178 VISFYREYWIEIYKEILKKCLIVNFGLTPFCF 83
           ++SF   YWIE Y+E   +    N GL  +CF
Sbjct: 44  MMSFCSPYWIESYEE--TRASFKNMGLWQYCF 73


>AE014298-215|AAF45632.1|  256|Drosophila melanogaster CG14779-PA,
           isoform A protein.
          Length = 256

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 178 VISFYREYWIEIYKEILKKCLIVNFGLTPFCF 83
           ++SF   YWIE Y+E   +    N GL  +CF
Sbjct: 44  MMSFCSPYWIESYEE--TRASFKNMGLWQYCF 73


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,457,233
Number of Sequences: 53049
Number of extensions: 560785
Number of successful extensions: 849
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)