Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14f13
(642 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P21287 Cluster: Uncharacterized 24.8 kDa protein in FGF... 179 5e-44
UniRef50_Q05126 Cluster: Uncharacterized 24.0 kDa protein; n=7; ... 126 5e-28
UniRef50_Q4KT55 Cluster: ORF-25 peptide; n=5; Nucleopolyhedrovir... 60 4e-08
UniRef50_A0T470 Cluster: ORF27; n=5; Nucleopolyhedrovirus|Rep: O... 57 3e-07
UniRef50_Q0N478 Cluster: Ac34-like protein; n=5; Nucleopolyhedro... 52 1e-05
UniRef50_A0EYS3 Cluster: Putative uncharacterized protein; n=1; ... 49 1e-04
UniRef50_Q9YMT2 Cluster: LdOrf-42 peptide; n=1; Lymantria dispar... 45 0.002
UniRef50_O41272 Cluster: ORF 552; n=3; Nucleopolyhedrovirus|Rep:... 44 0.003
UniRef50_UPI00006CF362 Cluster: hypothetical protein TTHERM_0006... 36 1.1
UniRef50_Q8IBT7 Cluster: Putative uncharacterized protein MAL7P1... 34 2.5
UniRef50_A7S854 Cluster: Predicted protein; n=4; Nematostella ve... 34 2.5
UniRef50_UPI0000F1EA1C Cluster: PREDICTED: similar to hCG33937,;... 33 7.7
UniRef50_O96233 Cluster: Putative uncharacterized protein PFB070... 33 7.7
>UniRef50_P21287 Cluster: Uncharacterized 24.8 kDa protein in
FGF-VUBI intergenic region; n=5;
Nucleopolyhedrovirus|Rep: Uncharacterized 24.8 kDa
protein in FGF-VUBI intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 215
Score = 179 bits (436), Expect = 5e-44
Identities = 81/86 (94%), Positives = 82/86 (95%)
Frame = -1
Query: 621 FHGNHAYRGTRDIACNNYVEHLNSDMGVVMLVEEYFYCLSSCNFKQDAKLALQTLTNFES 442
FH NHAYRGTRDI CNNYVEHLNSDMGVVML+EEYFYCLSSCNFKQDAK ALQTLT FES
Sbjct: 130 FHRNHAYRGTRDITCNNYVEHLNSDMGVVMLIEEYFYCLSSCNFKQDAKRALQTLTKFES 189
Query: 441 LSDLMASYNFSTPDLDTNAYELMDFE 364
LSDLMASYNFSTPDLDTNAYELMDFE
Sbjct: 190 LSDLMASYNFSTPDLDTNAYELMDFE 215
>UniRef50_Q05126 Cluster: Uncharacterized 24.0 kDa protein; n=7;
Nucleopolyhedrovirus|Rep: Uncharacterized 24.0 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 209
Score = 126 bits (304), Expect = 5e-28
Identities = 58/86 (67%), Positives = 70/86 (81%)
Frame = -1
Query: 621 FHGNHAYRGTRDIACNNYVEHLNSDMGVVMLVEEYFYCLSSCNFKQDAKLALQTLTNFES 442
FH HAYRG RDI+ + YV+HLNSDMGVV LVEEY++ LSSCN K +AK AL+TL N ES
Sbjct: 124 FHKTHAYRGPRDISVDAYVDHLNSDMGVVALVEEYYHWLSSCNDKAEAKRALKTLANVES 183
Query: 441 LSDLMASYNFSTPDLDTNAYELMDFE 364
L DL+ SYN+S+ D DT++YELMDFE
Sbjct: 184 LGDLLDSYNYSSVDADTSSYELMDFE 209
>UniRef50_Q4KT55 Cluster: ORF-25 peptide; n=5;
Nucleopolyhedrovirus|Rep: ORF-25 peptide - Chrysodeixis
chalcites nucleopolyhedrovirus
Length = 213
Score = 60.1 bits (139), Expect = 4e-08
Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = -1
Query: 621 FHGNHAYRGTRDIACNNYVEHLNSDMGVVMLVEEYFYCLSSCNFKQDAKLALQTLTNFES 442
FH + + + ++ + Y+E LNS+MGV+ VE Y+ LS +K +A+ + LT F S
Sbjct: 121 FHRKYVFDQSSNVNNSAYIEFLNSEMGVISFVELYYSYLSVPFWKLNAQFLFRDLTGFSS 180
Query: 441 LSDLMASYNFS-TPDLDTNAYELMDFE 364
+ +L+ YN+ D+D ++E MD E
Sbjct: 181 IKELLTFYNYDCLDDVDDVSFETMDEE 207
>UniRef50_A0T470 Cluster: ORF27; n=5; Nucleopolyhedrovirus|Rep:
ORF27 - Helicoverpa armigera NPV
Length = 255
Score = 57.2 bits (132), Expect = 3e-07
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = -1
Query: 621 FHGNHAYRGTRDIACNNYVEHLNSDMGVVMLVEEYFYCLSSCNFKQDAKLALQTLTNFES 442
FH + + + YV LNS+MGV+ VE Y+ L + AKL L+ LT F S
Sbjct: 169 FHKKYIFDKDMKTYPDEYVSFLNSEMGVISFVELYYSYLCVPFWNTTAKLLLRDLTGFTS 228
Query: 441 LSDLMASYNFS-TPDLDTNAYELMDFE 364
L L YN++ D+D +ELMD E
Sbjct: 229 LKQLFDHYNYAYANDVDEACFELMDCE 255
>UniRef50_Q0N478 Cluster: Ac34-like protein; n=5;
Nucleopolyhedrovirus|Rep: Ac34-like protein - Clanis
bilineata nucleopolyhedrosis virus
Length = 183
Score = 52.0 bits (119), Expect = 1e-05
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Frame = -1
Query: 621 FHGNHAYRGTRDIACNNYVEHLNSDMGVVMLVEEYFYCLSSCN-FKQDAKLALQTLTNFE 445
FH + + + + YV+ LNS+MG++ VE Y+ L+ + +K +A + L LT F+
Sbjct: 96 FHKKYIFDKCQTKFYHEYVDFLNSEMGIISFVELYYVYLALDDVWKHNAPILLDKLTGFK 155
Query: 444 SLSDLMASYNFSTPD-LDTNAYELMD 370
S+ L+ YN+ + DT+ E MD
Sbjct: 156 SIKSLLNHYNYECEEAADTSNVECMD 181
>UniRef50_A0EYS3 Cluster: Putative uncharacterized protein; n=1;
Ecotropis obliqua NPV|Rep: Putative uncharacterized
protein - Ecotropis obliqua NPV
Length = 189
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = -1
Query: 621 FHGNHAYRGTRDIACNNYVEHLNSDMGVVMLVEEYFYCLSSCNFKQDAKLALQTLTNFES 442
FH + + + + Y+E LNS+MG++ VE Y+ LS ++ AK + LT F+
Sbjct: 103 FHRRYIFCKDPLTSYDEYMEFLNSEMGIISFVELYYSYLSVEFWRPTAKFLFRDLTGFDG 162
Query: 441 LSDLMASYNFSTPD-LDTNAYELMDFE 364
+ DL+ Y ++ + +D + MD +
Sbjct: 163 VKDLLREYKYAADENVDRIDVQTMDMD 189
>UniRef50_Q9YMT2 Cluster: LdOrf-42 peptide; n=1; Lymantria dispar
MNPV|Rep: LdOrf-42 peptide - Lymantria dispar
multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 188
Score = 44.8 bits (101), Expect = 0.002
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Frame = -1
Query: 609 HAYRGTRDIACNNYVEHLNSDMGVVMLVEEYFYCLSSCN----FKQDAKLALQTLTNFES 442
HA + A + Y+E LN DMG++ VE Y+ LS+ ++ A + LT FE
Sbjct: 102 HAAYLVDERAGDEYIEFLNGDMGIISRVELYYSHLSAAREEAVWRAQAADVFRKLTGFEG 161
Query: 441 LSDLMASYNFSTP-DLDTNAYELMDFE 364
+ L+ Y+ + P D D +E M +E
Sbjct: 162 VRALLTHYDRAVPADADAAHFECMAYE 188
>UniRef50_O41272 Cluster: ORF 552; n=3; Nucleopolyhedrovirus|Rep:
ORF 552 - Spodoptera littoralis nuclear polyhedrosis
virus (SlNPV)
Length = 183
Score = 44.0 bits (99), Expect = 0.003
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = -1
Query: 621 FHGNHAYRGTRDIACNNYVEHLNSDMGVVMLVEEYFYCLSSCNF-KQDAKLALQTLTNFE 445
FH + + + YV+ LNS MG+V VE Y+ L++ F AK+ L LT
Sbjct: 93 FHKKYIFTKNMKTHYDEYVQFLNSQMGIVSYVELYYTYLAAPPFWNATAKIMLDELTGHS 152
Query: 444 SLSDLMASYNFSTP-DLDTNAYELMD 370
S++ L+ + T D D A MD
Sbjct: 153 SIASLLKHHGHETSIDADEPAAVAMD 178
>UniRef50_UPI00006CF362 Cluster: hypothetical protein TTHERM_00069700;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00069700 - Tetrahymena thermophila SB210
Length = 1802
Score = 35.5 bits (78), Expect = 1.1
Identities = 24/103 (23%), Positives = 47/103 (45%)
Frame = -1
Query: 468 LQTLTNFESLSDLMASYNFSTPDLDTNAYELMDFE*NTMWTLIVI*SHKLLTSLNLRNDV 289
++T +N S++ +S N D + D + + +I + ++ L + +
Sbjct: 1660 IKTCSNISSINTQFSSNNMLACGTDEGIIRIYDIDDENVIKIIKVSLSQIQNLLLVEHPA 1719
Query: 288 ICFSKLNSLYE*NSTCKTQSRDDVICFSKLNLRNDVICLNSLY 160
+ +N + S QS DD++ FSK++ ND+I NS Y
Sbjct: 1720 QNYQNINYILIVGS----QSDDDLVTFSKISNSNDIISTNSKY 1758
>UniRef50_Q8IBT7 Cluster: Putative uncharacterized protein
MAL7P1.77; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein MAL7P1.77 - Plasmodium
falciparum (isolate 3D7)
Length = 522
Score = 34.3 bits (75), Expect = 2.5
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -1
Query: 330 SHKLLTSLNLRNDVICFSKLN-SLYE*NSTCKTQSRDDVICFSKLNLRNDVI 178
S K T +N+ N CF N L+ N+ C QS+ ++ SK L+ND+I
Sbjct: 431 SFKKCTYVNIDNKDTCFLDYNYMLFLKNNNCALQSKSSLLSISKDLLKNDII 482
>UniRef50_A7S854 Cluster: Predicted protein; n=4; Nematostella
vectensis|Rep: Predicted protein - Nematostella vectensis
Length = 1851
Score = 34.3 bits (75), Expect = 2.5
Identities = 22/107 (20%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
Frame = -1
Query: 321 LLTSLNLRNDVICFSKLNSLYE*NSTCKTQSRDDVICFSKLNLRND---VICLNSLYE*N 151
L+ +N+ +D+ +K+N L++ K D+ +K+N+ +D V +N ++
Sbjct: 775 LVAKVNVSHDMTLVAKVNVLHDMTLVAKVNVSHDMTLVAKVNVSHDMTLVAKVNVSHDMT 834
Query: 150 STCKTQSRXDVICFSKLNLRNDVICFSKLKLALASRILACKTTIQGD 10
K D+ +K+N+ +D+ +K+ ++ ++A K + D
Sbjct: 835 LVAKVNVSHDMTLVAKVNMSHDMSLVAKVNVSHEMTLVA-KVNVSHD 880
Score = 32.7 bits (71), Expect = 7.7
Identities = 19/92 (20%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Frame = -1
Query: 321 LLTSLNLRNDVICFSKLNSLYE*NSTCKTQSRDDVICFSKLNLRND---VICLNSLYE*N 151
L+ +N+ +D+ +K+N +E K D+ +K+N+ +D V +N ++
Sbjct: 847 LVAKVNMSHDMSLVAKVNVSHEMTLVAKVNVSHDMTLVAKVNVSHDMTLVAKVNVSHDMT 906
Query: 150 STCKTQSRXDVICFSKLNLRNDVICFSKLKLA 55
K D+ +K+N+ +D+ +K+ ++
Sbjct: 907 LVAKVNVSHDMTLVAKVNVSHDMTLVAKVNMS 938
>UniRef50_UPI0000F1EA1C Cluster: PREDICTED: similar to hCG33937,;
n=5; Euteleostomi|Rep: PREDICTED: similar to hCG33937, -
Danio rerio
Length = 518
Score = 32.7 bits (71), Expect = 7.7
Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = -1
Query: 600 RGTR--DIACNNYVEHLNSDMGVVMLVEEYFYCLSSCNFKQDAKLALQTLTNFESLSDLM 427
RGT D+ E L G V VEE + L+ NF Q QTL ESL +
Sbjct: 187 RGTPVLDLFLAQEAERLGKQTGAVERVEEQCHPLNGLNFSQVLFALNQTLLQHESLRAGI 246
Query: 426 ASYNFSTPDL 397
F+T DL
Sbjct: 247 LQGTFTTEDL 256
>UniRef50_O96233 Cluster: Putative uncharacterized protein PFB0700c;
n=2; Plasmodium|Rep: Putative uncharacterized protein
PFB0700c - Plasmodium falciparum (isolate 3D7)
Length = 972
Score = 32.7 bits (71), Expect = 7.7
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = -1
Query: 306 NLRNDVICFSKLNSLYE*NSTCKTQSRDDVICFSK----LNLRNDVICLNSLYE*NSTCK 139
N ++D+IC +K +++ ++DD IC +K N ++D+IC N N
Sbjct: 120 NNKDDIICNNKDDTMCNNKDDTICNNKDDTICNNKDDIICNNKDDIICNN-----NDDTI 174
Query: 138 TQSRXDVICFSKLNLRNDVIC 76
++ D IC N +D IC
Sbjct: 175 CNNKDDTIC----NNNDDTIC 191
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 558,507,694
Number of Sequences: 1657284
Number of extensions: 9869548
Number of successful extensions: 21243
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 19931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21201
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48126133708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -