Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14f08
(665 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-l... 153 4e-36
UniRef50_Q8UZB5 Cluster: Coat protein; n=1; Grapevine fleck viru... 48 2e-04
UniRef50_Q71EB5 Cluster: 25kDa coat protein; n=1; Grapevine Red ... 47 5e-04
UniRef50_Q0V1A0 Cluster: Putative uncharacterized protein; n=1; ... 40 0.054
UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10; Tym... 38 0.16
UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden death-a... 38 0.16
UniRef50_A4BLY4 Cluster: TonB-like protein; n=1; Nitrococcus mob... 38 0.16
UniRef50_Q4S5F6 Cluster: Chromosome 19 SCAF14731, whole genome s... 37 0.50
UniRef50_Q8V0G9 Cluster: Coat protein; n=1; Bermuda grass etched... 37 0.50
UniRef50_Q0IKR9 Cluster: Polyprotein; n=8; Tymoviridae|Rep: Poly... 37 0.50
UniRef50_Q03R86 Cluster: Predicted outer membrane protein; n=1; ... 36 0.66
UniRef50_Q2GV52 Cluster: Putative uncharacterized protein; n=1; ... 36 0.66
UniRef50_P19128 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat ... 36 0.66
UniRef50_UPI0000E249B2 Cluster: PREDICTED: hypothetical protein;... 36 0.88
UniRef50_A3AXB6 Cluster: Putative uncharacterized protein; n=1; ... 36 1.2
UniRef50_Q55J15 Cluster: Putative uncharacterized protein; n=2; ... 36 1.2
UniRef50_UPI0000D9C9FB Cluster: PREDICTED: hypothetical protein,... 35 1.5
UniRef50_A5XB37 Cluster: Cytosolic glucose-6-phosphate isomerase... 35 1.5
UniRef50_Q24160 Cluster: Hemomucin; n=46; Diptera|Rep: Hemomucin... 35 1.5
UniRef50_UPI0000DB7F80 Cluster: PREDICTED: similar to SSXT prote... 35 2.0
UniRef50_Q1QHE7 Cluster: OmpA/MotB precursor; n=2; Nitrobacter|R... 35 2.0
UniRef50_A3Q486 Cluster: Transcriptional regulator, TetR family;... 35 2.0
UniRef50_A0VF81 Cluster: Putative uncharacterized protein; n=4; ... 35 2.0
UniRef50_Q9NKT1 Cluster: Putative uncharacterized protein; n=2; ... 35 2.0
UniRef50_A7RPE6 Cluster: Predicted protein; n=2; Nematostella ve... 35 2.0
UniRef50_UPI0000E46430 Cluster: PREDICTED: similar to doublesex ... 34 2.7
UniRef50_O89519 Cluster: Virion protein; n=2; Tymovirus|Rep: Vir... 34 2.7
UniRef50_UPI00003654E6 Cluster: Ankyrin repeat domain-containing... 34 3.5
UniRef50_Q4SSN8 Cluster: Chromosome 15 SCAF14367, whole genome s... 34 3.5
UniRef50_Q2JC86 Cluster: Response regulator receiver and SARP do... 34 3.5
UniRef50_Q9FWC6 Cluster: Putative uncharacterized protein OSJNBb... 34 3.5
UniRef50_Q5XL24 Cluster: pH-response transcription factor pacC/R... 34 3.5
UniRef50_Q9ZT17 Cluster: Classical arabinogalactan protein 3 pre... 34 3.5
UniRef50_Q4PA10 Cluster: Putative uncharacterized protein; n=1; ... 33 4.7
UniRef50_A6RXJ9 Cluster: Putative uncharacterized protein; n=2; ... 33 4.7
UniRef50_A2QU02 Cluster: Similarity: similarities correspond to ... 33 4.7
UniRef50_UPI0000DB7674 Cluster: PREDICTED: hypothetical protein;... 33 6.2
UniRef50_Q8DM37 Cluster: Tll0286 protein; n=1; Synechococcus elo... 33 6.2
UniRef50_A4TWK0 Cluster: Glutamine synthetase adenylyltransferas... 33 6.2
UniRef50_Q01LX7 Cluster: OSIGBa0145C02.3 protein; n=3; Oryza sat... 33 6.2
UniRef50_A3BPR9 Cluster: DNA-directed RNA polymerase; n=7; Magno... 33 6.2
UniRef50_A7E3J6 Cluster: Putative DUX4 protein; n=1; Procavia ca... 33 6.2
UniRef50_A7RYS4 Cluster: Predicted protein; n=1; Nematostella ve... 33 6.2
UniRef50_O14776 Cluster: Transcription elongation regulator 1; n... 33 6.2
UniRef50_Q12873 Cluster: Chromodomain-helicase-DNA-binding prote... 33 6.2
UniRef50_UPI0000EBDE35 Cluster: PREDICTED: hypothetical protein;... 33 8.2
UniRef50_UPI0000499027 Cluster: hypothetical protein 189.t00012;... 33 8.2
UniRef50_Q5D5G3 Cluster: Phage tail sheath protein; n=1; Wolbach... 33 8.2
UniRef50_Q0D9D2 Cluster: Os06g0726200 protein; n=2; cellular org... 33 8.2
UniRef50_Q5BZG2 Cluster: SJCHGC06992 protein; n=1; Schistosoma j... 33 8.2
UniRef50_Q4Q064 Cluster: Putative uncharacterized protein; n=3; ... 33 8.2
UniRef50_Q2WBY1 Cluster: Fork head protein; n=1; Platynereis dum... 33 8.2
>UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-like
latent virus|Rep: Coat protein - Bombyx mori Macula-like
latent virus
Length = 237
Score = 153 bits (371), Expect = 4e-36
Identities = 70/72 (97%), Positives = 71/72 (98%)
Frame = -2
Query: 664 LALMHQATLPCDLGYINPIIKSPIPYTNHPRLNIHFHQSPDAVLEGIRAGVKASVVIRGS 485
LALMHQATLPCDLGYINPIIKSPIPYTNHPRLNIHFHQS DAVLEG+RAGVKASVVIRGS
Sbjct: 166 LALMHQATLPCDLGYINPIIKSPIPYTNHPRLNIHFHQSADAVLEGVRAGVKASVVIRGS 225
Query: 484 ISVSHPLVTGHG 449
ISVSHPLVTGHG
Sbjct: 226 ISVSHPLVTGHG 237
>UniRef50_Q8UZB5 Cluster: Coat protein; n=1; Grapevine fleck
virus|Rep: Coat protein - Grapevine fleck virus
Length = 230
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/59 (38%), Positives = 34/59 (57%)
Frame = -2
Query: 640 LPCDLGYINPIIKSPIPYTNHPRLNIHFHQSPDAVLEGIRAGVKASVVIRGSISVSHPL 464
LP +L +NP IK + YT+ PRL F+++ V G A + S++IRG I S P+
Sbjct: 165 LPAELSSLNPTIKDSVTYTDCPRLTCGFYRNDACVALGSSAPICGSILIRGVIECSAPI 223
>UniRef50_Q71EB5 Cluster: 25kDa coat protein; n=1; Grapevine Red
Globe virus|Rep: 25kDa coat protein - Grapevine Red
Globe virus
Length = 235
Score = 46.8 bits (106), Expect = 5e-04
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = -2
Query: 640 LPCDLGYINPIIKSPIPYTNHPRLNIHFHQSPDAVLEGIRAGV-KASVVIRGSISVS 473
LP DL NP++K + Y N P+L + FH++ DA + V S+VIRG + S
Sbjct: 169 LPADLRSTNPVVKDTVSYNNTPKLTVAFHKNTDAPAVSVTTPVIYGSIVIRGVVRCS 225
>UniRef50_Q0V1A0 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 1581
Score = 39.9 bits (89), Expect = 0.054
Identities = 27/87 (31%), Positives = 36/87 (41%)
Frame = -3
Query: 660 PLCIKPPSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPS 481
P +PP A S + S+ P + P+ S P + AP PP SSEAPS
Sbjct: 577 PTSSQPPGSASSDSPPASTQPSWSAPSDSRPAS---QPASSQPSGSAPSSAPPASSEAPS 633
Query: 480 AYLTPSSLGMAKGVSPPYFQVNDESQA 400
+ + L + SPP SQA
Sbjct: 634 SAPPSTQLASSDAPSPPASSAQGSSQA 660
>UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10;
Tymoviridae|Rep: Replicase-associated protein -
Poinsettia mosaic virus
Length = 1987
Score = 38.3 bits (85), Expect = 0.16
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = -2
Query: 658 LMHQATLPCDLGYINPIIKSPIPYTNHPRLNIHFHQSPDAVLEGIRAGVKASVVIRGSI 482
L H L DL Y+NP+IK + Y + P+L ++ + D G A A+V++ G +
Sbjct: 1910 LSHTYELRADLSYLNPVIKDSVSYVDTPKLTLN---ASDPTGSGSTATTVATVLVSGKL 1965
>UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden
death-associated virus|Rep: Polyprotein - Citrus sudden
death-associated virus
Length = 2189
Score = 38.3 bits (85), Expect = 0.16
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = -2
Query: 658 LMHQAT-LPCDLGYINPIIKSPIPYTNHPRLNIHFHQSPDAVLEGIRAGVKASVVIRGSI 482
LM T LP DL +NP++K P+ YT+ PR + + + G + ++++RG +
Sbjct: 2124 LMSSTTHLPADLTRLNPVLKGPVKYTDCPRFSYSVYSN-----GGTKGTNLCTIILRGVV 2178
Query: 481 SVSHP 467
+S P
Sbjct: 2179 RLSGP 2183
>UniRef50_A4BLY4 Cluster: TonB-like protein; n=1; Nitrococcus
mobilis Nb-231|Rep: TonB-like protein - Nitrococcus
mobilis Nb-231
Length = 307
Score = 38.3 bits (85), Expect = 0.16
Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
Frame = -3
Query: 660 PLCIKPP-SPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPG-LKPPLSS-- 493
P+ +KP S + + R S PR HTP P+ + PL P LKPP S+
Sbjct: 112 PIPVKPAKSEPVVEQTPRESTPREHTPKPPEPPQPKLQPLKAAESARPPAPLKPPTSTHN 171
Query: 492 --EAPSAYLTPSSLGMAKGVSPPYFQVNDESQAS 397
+ +A L PS+ G Q D S A+
Sbjct: 172 SVDERTAALAPSAKGATASPGQTAGQATDHSDAT 205
>UniRef50_Q4S5F6 Cluster: Chromosome 19 SCAF14731, whole genome
shotgun sequence; n=2; Clupeocephala|Rep: Chromosome 19
SCAF14731, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 842
Score = 36.7 bits (81), Expect = 0.50
Identities = 23/61 (37%), Positives = 28/61 (45%)
Frame = -3
Query: 645 PPSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTP 466
PP P+IS TS+ +S P P P + +P TP A GL S S Y TP
Sbjct: 709 PPHPSISLTSSSTSTPNPAPPPVPTSAHLQPSPSTPSSSSAANGLS---SLHPSSLYKTP 765
Query: 465 S 463
S
Sbjct: 766 S 766
>UniRef50_Q8V0G9 Cluster: Coat protein; n=1; Bermuda grass
etched-line virus|Rep: Coat protein - Bermuda grass
etched-line virus
Length = 195
Score = 36.7 bits (81), Expect = 0.50
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = -2
Query: 658 LMHQATLPCDLGYINPIIKSPIPYTNHPRLNIHFHQSPDAVLEGIRAGVK-ASVVIRGSI 482
L +P DL +NP+IKS + Y + PR ++ P ++ G A K A++ IRG++
Sbjct: 130 LSSTTVIPADLSRMNPVIKSSVSYNDCPRWSL---TCP--LVSGSSANTKLATLYIRGTV 184
Query: 481 SVSHP 467
+S P
Sbjct: 185 RLSSP 189
>UniRef50_Q0IKR9 Cluster: Polyprotein; n=8; Tymoviridae|Rep:
Polyprotein - Grapevine rupestris vein feathering virus
Length = 2068
Score = 36.7 bits (81), Expect = 0.50
Identities = 25/61 (40%), Positives = 33/61 (54%)
Frame = -2
Query: 646 ATLPCDLGYINPIIKSPIPYTNHPRLNIHFHQSPDAVLEGIRAGVKASVVIRGSISVSHP 467
AT+P DL INP IKS + Y + PRL + A + A V+IRG +SVS P
Sbjct: 2009 ATVPADLTRINPRIKSSVGYLDTPRLTGTTMKCATAQTLPL-----AYVMIRGMVSVSGP 2063
Query: 466 L 464
+
Sbjct: 2064 M 2064
>UniRef50_Q03R86 Cluster: Predicted outer membrane protein; n=1;
Lactobacillus brevis ATCC 367|Rep: Predicted outer
membrane protein - Lactobacillus brevis (strain ATCC 367
/ JCM 1170)
Length = 619
Score = 36.3 bits (80), Expect = 0.66
Identities = 25/82 (30%), Positives = 30/82 (36%), Gaps = 4/82 (4%)
Frame = -3
Query: 663 SPLCIKPPSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAP 484
+P P P T NP TPT P NP P PG PP E P
Sbjct: 397 NPGTTTPTEPENPTNPTEPGNPGTTTPTEPTEPGTPTNPTEP----SNPGTTPPTKPENP 452
Query: 483 SAYLTPSSLGMA----KGVSPP 430
+ P+ G+ GV+PP
Sbjct: 453 GTTVPPTKPGVTPPTKPGVTPP 474
>UniRef50_Q2GV52 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 437
Score = 36.3 bits (80), Expect = 0.66
Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Frame = -3
Query: 663 SPLCIKPPSPAISXTSTRS-SNPR---FHTPT-TPDLTSISINPLTPY*KEFAPGLKPPL 499
SPL I PPSP + T T++ + P+ F PT TP S NP T Y + P L
Sbjct: 54 SPLFIIPPSPTQTQTQTQTQTQPQVTYFPAPTPTPIFRSPPPNPPTLYAPKLKPNPDAGL 113
Query: 498 SSEAPSAYLTPSSLGMAKGVSPP 430
S ++ +T SSL + PP
Sbjct: 114 LSSNSTSTITTSSLLLPLSDIPP 136
>UniRef50_P19128 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat
protein - Cacao yellow mosaic virus
Length = 188
Score = 36.3 bits (80), Expect = 0.66
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = -2
Query: 640 LPCDLGYINPIIKSPIPYTNHPRLNIHFHQSPDAVLEGIRAGVKASVVIRGSISVSHPLV 461
+PC L INPIIK + YT+ P+L I+ + ++ IRG + + PL+
Sbjct: 130 VPCPLTNINPIIKDSVTYTDTPKLLIY------STAPSYSTSATCTLTIRGKVRLHSPLL 183
Query: 460 T 458
+
Sbjct: 184 S 184
>UniRef50_UPI0000E249B2 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 340
Score = 35.9 bits (79), Expect = 0.88
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = -3
Query: 636 PAISXTSTRSSNPRFHTPTTPDLTSISINPLTP-Y*KEFAPGLKPPLSSEAPSAYLTPSS 460
P+ + T TRSS P +TP LT S LTP P P L+ + + L PSS
Sbjct: 148 PSSTPTLTRSSTPTLIPSSTPTLTPSSRPTLTPSSTPTLTPSSTPTLTPSSTTPTLNPSS 207
Query: 459 LGMAKGVSPP 430
L + S P
Sbjct: 208 LPILTPSSTP 217
>UniRef50_A3AXB6 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 479
Score = 35.5 bits (78), Expect = 1.2
Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = -3
Query: 663 SPLCIKPPS-PAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEA 487
SP C+ PP+ P S T T + P +TP PL P G PP +
Sbjct: 86 SPYCVNPPNAPPSSSTPTTTPTPTPPFASTPFAPDDQPPPLPPI-----GGFTPPSFEPS 140
Query: 486 PSAYLTPSSLGMAKGVSPP 430
P A TP G +PP
Sbjct: 141 PPASSTPGFTPSTPGSAPP 159
>UniRef50_Q55J15 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 744
Score = 35.5 bits (78), Expect = 1.2
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = -3
Query: 663 SPLCIKPPSPAISXTSTRSSNPRFHTPTTPDL-TSISINPLTPY*KEFAPGLKPPLSSEA 487
SP + PPSPA S T S P + P TS ++P TPY F P +P
Sbjct: 399 SPHLVSPPSPAPS--QTPSEQPASVETSAPQSDTSFPVSP-TPY---FPPAYRPASVRSI 452
Query: 486 PSAYLTPSSLGMAKGVSPPYFQVNDESQASRLIS 385
P++ PS + PPY V+ ES A ++
Sbjct: 453 PTSTAGPSR--PSASAHPPY--VSSESSAQNSLA 482
>UniRef50_UPI0000D9C9FB Cluster: PREDICTED: hypothetical protein,
partial; n=1; Macaca mulatta|Rep: PREDICTED:
hypothetical protein, partial - Macaca mulatta
Length = 180
Score = 35.1 bits (77), Expect = 1.5
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = -3
Query: 645 PPSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSS--EAPSAYL 472
PP A S S P P + L S+S P+T +F P L PP+SS + PS+
Sbjct: 35 PPVTAPSSQFPPVSAPSSQFPRSVPLKSVSAPPVTASSSQFPPSLPPPVSSPGQCPSSQS 94
Query: 471 TP 466
P
Sbjct: 95 VP 96
>UniRef50_A5XB37 Cluster: Cytosolic glucose-6-phosphate isomerase;
n=29; Eukaryota|Rep: Cytosolic glucose-6-phosphate
isomerase - Porphyra yezoensis
Length = 635
Score = 35.1 bits (77), Expect = 1.5
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Frame = -2
Query: 658 LMHQA-TLPCD-LGYI---NPIIKSPIPYTNHPRLNIHFHQSPDAVLEG 527
L+H T+PCD +G++ NPI + P +NH L +F PDA+ G
Sbjct: 464 LLHMGQTVPCDFIGFMESQNPICEEGEPVSNHDELVANFFAQPDALANG 512
>UniRef50_Q24160 Cluster: Hemomucin; n=46; Diptera|Rep: Hemomucin -
Drosophila melanogaster (Fruit fly)
Length = 582
Score = 35.1 bits (77), Expect = 1.5
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -3
Query: 660 PLCIKPPSPAISXTSTRSSNPRFHTPTTPDL-TSISINPLTPY*KEFAPGLKPPLSSEAP 484
P KPP+ S T+T ++ P+ T TTP T+ + P P K P P+ E P
Sbjct: 500 PTTTKPPTAKPSTTTTPTTTPKPTTTTTPTTPTTPTPEPSKPKVKRTVPEKPAPVEEEIP 559
Query: 483 S 481
S
Sbjct: 560 S 560
>UniRef50_UPI0000DB7F80 Cluster: PREDICTED: similar to SSXT protein
(Synovial sarcoma, translocated to X chromosome) (SYT
protein); n=1; Apis mellifera|Rep: PREDICTED: similar to
SSXT protein (Synovial sarcoma, translocated to X
chromosome) (SYT protein) - Apis mellifera
Length = 608
Score = 34.7 bits (76), Expect = 2.0
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = -1
Query: 659 PYASSHPPLRSRXHQPDHQIPDSIHQPP 576
P+ SSHPP HQ HQ P + HQPP
Sbjct: 428 PHPSSHPP-HQPPHQSPHQPPHAPHQPP 454
>UniRef50_Q1QHE7 Cluster: OmpA/MotB precursor; n=2; Nitrobacter|Rep:
OmpA/MotB precursor - Nitrobacter hamburgensis (strain
X14 / DSM 10229)
Length = 673
Score = 34.7 bits (76), Expect = 2.0
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Frame = -3
Query: 600 PRFHTPTTPDLTSIS--INPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVSPP 430
P TP PD+T S P TP +P PP + AP+A P+ K +PP
Sbjct: 242 PGSTTPAAPDVTPTSPRATPATPSAPVASPAATPPSGAAAPAAATPPTGPAGTKAGTPP 300
>UniRef50_A3Q486 Cluster: Transcriptional regulator, TetR family;
n=1; Mycobacterium sp. JLS|Rep: Transcriptional
regulator, TetR family - Mycobacterium sp. (strain JLS)
Length = 236
Score = 34.7 bits (76), Expect = 2.0
Identities = 22/60 (36%), Positives = 31/60 (51%)
Frame = -1
Query: 182 TPPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDSRHVSSDSFGV*RKILI 3
TP TVL+D I VLKD+ TA+LS S+ I R V + S+ + R +L+
Sbjct: 155 TPKLSTVLHDAIEPVLKDS-TAVLSGSVTLDEVVDLIVRMAVSHYFMPSNDYREFRDVLV 213
>UniRef50_A0VF81 Cluster: Putative uncharacterized protein; n=4;
Proteobacteria|Rep: Putative uncharacterized protein -
Delftia acidovorans SPH-1
Length = 1679
Score = 34.7 bits (76), Expect = 2.0
Identities = 25/73 (34%), Positives = 35/73 (47%)
Frame = -3
Query: 648 KPPSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLT 469
+PPSP S TR S+P +TP + + S P P P +P S PS L+
Sbjct: 373 RPPSPP-SRPPTRPSSP--NTPPSRPPSPPSTPPSRPPSPPSRPPTRPSSPSTPPSRPLS 429
Query: 468 PSSLGMAKGVSPP 430
P S ++ +SPP
Sbjct: 430 PPSTPPSRPLSPP 442
>UniRef50_Q9NKT1 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 2487
Score = 34.7 bits (76), Expect = 2.0
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Frame = -3
Query: 663 SPLCIKPPSPAISXTSTRSSNPRFHTPTTPDL---TSISINPLTPY*KEFAPGLKPPL-- 499
S + PPS A+ SS+P+ P +P L + PLT Y + PG P
Sbjct: 2120 SSAAVMPPSTAV---HAMSSHPQLQQPQSPSLLFDAGSLLQPLTWYPYAYMPGTANPYAQ 2176
Query: 498 SSEAPSAYLTPSSLGMAKGVS 436
S+++ SA +TP+ A ++
Sbjct: 2177 SADSSSARITPAKAATASSMT 2197
>UniRef50_A7RPE6 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella vectensis
Length = 1263
Score = 34.7 bits (76), Expect = 2.0
Identities = 22/72 (30%), Positives = 30/72 (41%)
Frame = -3
Query: 645 PPSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTP 466
P +P+ T + S P TP+ P S+ P TP L P++ PS TP
Sbjct: 1016 PSTPSTPSTPSTPSTPS--TPSMPSTPSMPNTPSTPSTPSTPSTLSTPITPSTPSTPSTP 1073
Query: 465 SSLGMAKGVSPP 430
S+ M S P
Sbjct: 1074 STPSMPSTPSTP 1085
>UniRef50_UPI0000E46430 Cluster: PREDICTED: similar to doublesex and
mab-3 related transcription factor 5; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
doublesex and mab-3 related transcription factor 5 -
Strongylocentrotus purpuratus
Length = 504
Score = 34.3 bits (75), Expect = 2.7
Identities = 25/84 (29%), Positives = 38/84 (45%)
Frame = -3
Query: 642 PSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPS 463
P+P S TS + +PR +P T S+S ++P K +P P + S S +
Sbjct: 205 PAPPHSPTSLPNQDPRVSSPDTRSPRSVSAGTMSPT-KSLSPVASPRIESAEQSEVIRTP 263
Query: 462 SLGMAKGVSPPYFQVNDESQASRL 391
GM + S F + S+A RL
Sbjct: 264 GFGMIQPGSGLDF---EHSEARRL 284
>UniRef50_O89519 Cluster: Virion protein; n=2; Tymovirus|Rep: Virion
protein - Dulcamara mottle virus
Length = 188
Score = 34.3 bits (75), Expect = 2.7
Identities = 22/60 (36%), Positives = 34/60 (56%)
Frame = -2
Query: 640 LPCDLGYINPIIKSPIPYTNHPRLNIHFHQSPDAVLEGIRAGVKASVVIRGSISVSHPLV 461
+PC+L +N +IK YT+ P+L ++ SP V +G A+V I G I +S PL+
Sbjct: 131 VPCNLQSVNAMIKDSTIYTDSPKLLVY---SP--VAKGSPKTPSATVQIAGQILLSAPLL 185
>UniRef50_UPI00003654E6 Cluster: Ankyrin repeat domain-containing
protein 13B.; n=1; Takifugu rubripes|Rep: Ankyrin repeat
domain-containing protein 13B. - Takifugu rubripes
Length = 634
Score = 33.9 bits (74), Expect = 3.5
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = -1
Query: 200 PSCYFSTPPFDTVLYDNIRTVLKDNKTALLSASIQASL 87
PSC F PP TVL R L++++ LL +IQ SL
Sbjct: 506 PSCVFEVPPGYTVLGSKQRDTLREDEEDLLQFAIQQSL 543
>UniRef50_Q4SSN8 Cluster: Chromosome 15 SCAF14367, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 15 SCAF14367, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 1031
Score = 33.9 bits (74), Expect = 3.5
Identities = 22/73 (30%), Positives = 32/73 (43%)
Frame = -3
Query: 645 PPSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTP 466
PPS + S ++ S P TPTT + P P +F+P + PPL + P
Sbjct: 392 PPSFSPSSPASPFSPPDSPTPTTLERPPPD-EPAPPLPPDFSPSISPPLCLHDDAIDEEP 450
Query: 465 SSLGMAKGVSPPY 427
S + G PP+
Sbjct: 451 SGALLGSGSHPPW 463
>UniRef50_Q2JC86 Cluster: Response regulator receiver and SARP
domain protein precursor; n=2; Frankia|Rep: Response
regulator receiver and SARP domain protein precursor -
Frankia sp. (strain CcI3)
Length = 988
Score = 33.9 bits (74), Expect = 3.5
Identities = 25/77 (32%), Positives = 35/77 (45%)
Frame = -3
Query: 663 SPLCIKPPSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAP 484
SPL PP P S T+ + PTTP ++ S P TP A G +S AP
Sbjct: 263 SPLPSAPPVPGPSSTAPGPTTTPPAAPTTPAPSTTSPGPPTPGPSSAAGGPTTVPTSPAP 322
Query: 483 SAYLTPSSLGMAKGVSP 433
+A T S++ + +P
Sbjct: 323 TAPPTTSAVPAPRPPAP 339
>UniRef50_Q9FWC6 Cluster: Putative uncharacterized protein
OSJNBb0018B10.14; n=2; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OSJNBb0018B10.14 - Oryza sativa subsp. japonica (Rice)
Length = 333
Score = 33.9 bits (74), Expect = 3.5
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 8/99 (8%)
Frame = -3
Query: 663 SPLCIKPPSPAISXTSTRSSNP-RFHTPTTPDLTS------ISINPLTPY*KE-FAPGLK 508
+PL + PP+PA R SNP +PT+P L + PL+PY AP
Sbjct: 86 TPLSL-PPAPAPEMAGIRFSNPASLSSPTSPMLAGEIPPLPATSGPLSPYLSSAVAPSRF 144
Query: 507 PPLSSEAPSAYLTPSSLGMAKGVSPPYFQVNDESQASRL 391
P+S +P + P+ + + PP+ + A+RL
Sbjct: 145 FPISPNSPEPPIAPAPCNL---LPPPFPPLRPPLAAARL 180
>UniRef50_Q5XL24 Cluster: pH-response transcription factor
pacC/RIM101; n=15; Pezizomycotina|Rep: pH-response
transcription factor pacC/RIM101 - Aspergillus giganteus
Length = 678
Score = 33.9 bits (74), Expect = 3.5
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = -3
Query: 618 STRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKGV 439
S S P H T ++ +P T P L PP S+++ ++ +P S+ A V
Sbjct: 391 SPPSQLPPSHATATTSAATMMSHPATHSPSTGTPALTPPSSAQSYTSGRSPISMSSAHRV 450
Query: 438 SPPY 427
SPP+
Sbjct: 451 SPPH 454
>UniRef50_Q9ZT17 Cluster: Classical arabinogalactan protein 3
precursor; n=2; Arabidopsis thaliana|Rep: Classical
arabinogalactan protein 3 precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 139
Score = 33.9 bits (74), Expect = 3.5
Identities = 20/55 (36%), Positives = 25/55 (45%)
Frame = -3
Query: 645 PPSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPS 481
PP PA T ++ P PTT TS +P PY APG P + AP+
Sbjct: 55 PPIPANEPTPVPTTPPTVSPPTTSPTTSPVASPPKPY--ALAPGPSGPTPAPAPA 107
>UniRef50_Q4PA10 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1090
Score = 33.5 bits (73), Expect = 4.7
Identities = 23/61 (37%), Positives = 32/61 (52%)
Frame = -3
Query: 642 PSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPS 463
P PA++ T SS+ P T ++ I P TP F+P PP SS +PSA ++ S
Sbjct: 67 PDPAVAFIPTPSSSS---APVTAQVSPPKITPATPS-SSFSP---PPPSSSSPSATVSVS 119
Query: 462 S 460
S
Sbjct: 120 S 120
>UniRef50_A6RXJ9 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 940
Score = 33.5 bits (73), Expect = 4.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1
Query: 659 PYASSHPPLRSRXHQPDHQIPDSIHQ 582
P A+SHPP + H P HQ P HQ
Sbjct: 209 PSATSHPPPTPQHHLPQHQTPSHSHQ 234
>UniRef50_A2QU02 Cluster: Similarity: similarities correspond to
multiple threonine and proline residues; n=2;
Aspergillus|Rep: Similarity: similarities correspond to
multiple threonine and proline residues - Aspergillus
niger
Length = 699
Score = 33.5 bits (73), Expect = 4.7
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 648 KPPSPAISXTSTRSSNPRFHTPTTPDL 568
+ P P + TSTR+SNP HTP P L
Sbjct: 29 RKPHPPKATTSTRTSNPAAHTPNQPPL 55
>UniRef50_UPI0000DB7674 Cluster: PREDICTED: hypothetical protein;
n=2; Eumetazoa|Rep: PREDICTED: hypothetical protein -
Apis mellifera
Length = 441
Score = 33.1 bits (72), Expect = 6.2
Identities = 25/72 (34%), Positives = 30/72 (41%)
Frame = -3
Query: 645 PPSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTP 466
PP+P + + T S P TP P S P TPY P +P S PS+YL P
Sbjct: 130 PPTPYVPPSPT-SRPPPIPTPYLPPSPPTSRPPPTPYLPPSPPINRP---SPPPSSYLPP 185
Query: 465 SSLGMAKGVSPP 430
S PP
Sbjct: 186 SPSRPPSPQPPP 197
>UniRef50_Q8DM37 Cluster: Tll0286 protein; n=1; Synechococcus
elongatus|Rep: Tll0286 protein - Synechococcus elongatus
(Thermosynechococcus elongatus)
Length = 158
Score = 33.1 bits (72), Expect = 6.2
Identities = 20/75 (26%), Positives = 33/75 (44%)
Frame = -1
Query: 401 LRALLVVIPRILRSPPPTHPLIEDVVMATNQAIIDYKVKIADNNLVTHKELALKVSSIIG 222
L LL+VIP L P +H +I + A NQ ++ + + DN T + + +
Sbjct: 8 LLLLLLVIPLWLAVSPRSHAMIRTIEEAPNQVVVQSRHPLRDNRGFTWQVILFSRPDQLQ 67
Query: 221 TRVYVFDPSCYFSTP 177
R+ F +F P
Sbjct: 68 LRLVGFPEQYHFRHP 82
>UniRef50_A4TWK0 Cluster: Glutamine synthetase adenylyltransferase;
n=3; Magnetospirillum|Rep: Glutamine synthetase
adenylyltransferase - Magnetospirillum gryphiswaldense
Length = 1137
Score = 33.1 bits (72), Expect = 6.2
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = -1
Query: 455 AWLKGFRPLIFK*MMNHKLRALLVVIPRILRSPPPTHPLIEDVVMATNQA 306
A L G P + + + H + VV P PPPT LIED+ A ++A
Sbjct: 728 AELMGNAPKLAEHLARHTTQLDAVVAPSFFEPPPPTERLIEDLNKALSEA 777
>UniRef50_Q01LX7 Cluster: OSIGBa0145C02.3 protein; n=3; Oryza
sativa|Rep: OSIGBa0145C02.3 protein - Oryza sativa
(Rice)
Length = 212
Score = 33.1 bits (72), Expect = 6.2
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = -3
Query: 651 IKPPSPAISXTSTRSSNPR--FHTPT-TPDLTSISINPLTPY*KEFAPGLKPPLSSEAPS 481
I PPSPA + +PR F TP+ +P S P +P E +PP+ EAP+
Sbjct: 21 ITPPSPAEAEAEGSPDSPRSEFTTPSGSPRAAEDSTPPPSPPRAE-----QPPVKEEAPA 75
Query: 480 AYLTPSSLGMAKGVSPP 430
A ++ K VSPP
Sbjct: 76 ASPQLATPPPVKTVSPP 92
>UniRef50_A3BPR9 Cluster: DNA-directed RNA polymerase; n=7;
Magnoliophyta|Rep: DNA-directed RNA polymerase - Oryza
sativa subsp. japonica (Rice)
Length = 1507
Score = 33.1 bits (72), Expect = 6.2
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Frame = -3
Query: 645 PPSPAISXTS-TRSSNPRFHTPTTPDL--TSISINPLTPY*KEFAPGLKPPLSSEAPSAY 475
P SP+ S TS + S ++PT+P TS S +P +P +P P + +PS
Sbjct: 1351 PTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPNYSPTSPSYNPSSAKYSPSHA 1410
Query: 474 LTPSS--LGMAKGVSPPY 427
+PSS L SP Y
Sbjct: 1411 YSPSSPRLSPYSQTSPNY 1428
>UniRef50_A7E3J6 Cluster: Putative DUX4 protein; n=1; Procavia
capensis|Rep: Putative DUX4 protein - Procavia capensis
(Cape hyrax) (Rock dassie)
Length = 481
Score = 33.1 bits (72), Expect = 6.2
Identities = 17/31 (54%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -3
Query: 519 PGLKPPLSSEAPSAYLT-PSSLGMAKGVSPP 430
PG + P EAPSA T PSS MA G++PP
Sbjct: 303 PGPRAPAGGEAPSAPQTLPSSQPMANGLAPP 333
>UniRef50_A7RYS4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 1151
Score = 33.1 bits (72), Expect = 6.2
Identities = 25/60 (41%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -3
Query: 642 PSPAISXTSTRSSN-PRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTP 466
P IS TS SS PR H PTTP T + P T P +S+APSA TP
Sbjct: 356 PQTTISITSIISSAIPRGHMPTTPSTTPQATPPST------TSQTTAPTASQAPSAGETP 409
>UniRef50_O14776 Cluster: Transcription elongation regulator 1;
n=44; Tetrapoda|Rep: Transcription elongation regulator
1 - Homo sapiens (Human)
Length = 1098
Score = 33.1 bits (72), Expect = 6.2
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = -3
Query: 642 PSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPG-----LKPPLSSEAPSA 478
P+PA+S TST SS P T TT TS++ TP ++ P P +S P+
Sbjct: 266 PAPAVS-TSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVSTPAP 324
Query: 477 YLTP 466
TP
Sbjct: 325 TATP 328
>UniRef50_Q12873 Cluster: Chromodomain-helicase-DNA-binding protein 3;
n=124; Eumetazoa|Rep: Chromodomain-helicase-DNA-binding
protein 3 - Homo sapiens (Human)
Length = 2000
Score = 33.1 bits (72), Expect = 6.2
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = -3
Query: 651 IKPPSPAISXTSTRSSNPRFHTPTTPDLTS----ISINPLTPY*KEFAPGLKPPLSSE 490
+ P A S S+R+S+P +PTTP+ ++ + P TP E G++ PL E
Sbjct: 1517 LMPDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKE 1574
>UniRef50_UPI0000EBDE35 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 135
Score = 32.7 bits (71), Expect = 8.2
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -3
Query: 615 TRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPS 481
T S P++H P PD + NP+TPY + PP+ + AP+
Sbjct: 47 THISLPQYHRPPKPDFSLAPDNPVTPY-------VSPPVCTAAPA 84
>UniRef50_UPI0000499027 Cluster: hypothetical protein 189.t00012;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 189.t00012 - Entamoeba histolytica HM-1:IMSS
Length = 713
Score = 32.7 bits (71), Expect = 8.2
Identities = 16/48 (33%), Positives = 30/48 (62%)
Frame = -1
Query: 383 VIPRILRSPPPTHPLIEDVVMATNQAIIDYKVKIADNNLVTHKELALK 240
+I RIL S P + L ED+ N+++++ +++ +N+ T+ LALK
Sbjct: 117 IIMRILNSMPDNYTLTEDIYKKINKSLVE-RLQDTQSNVRTYAVLALK 163
>UniRef50_Q5D5G3 Cluster: Phage tail sheath protein; n=1; Wolbachia
endosymbiont of Drosophila mojavensis|Rep: Phage tail
sheath protein - Wolbachia endosymbiont of Drosophila
mojavensis
Length = 296
Score = 32.7 bits (71), Expect = 8.2
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Frame = -1
Query: 395 ALLVVIPRILRSPPPTHPLIEDVVMATNQAIIDYKVK----IADNNLVTHKELALKVSSI 228
+++ V+PRIL +P TH L ED A++ K I + T+ E A+K
Sbjct: 102 SIVHVLPRILIAPQFTHQLPEDGKNPAVAALVPIAEKLRSIIVADGPNTNDEEAIKWRKS 161
Query: 227 IG-TRVYVFDP 198
+G +RVYV DP
Sbjct: 162 VGSSRVYVVDP 172
>UniRef50_Q0D9D2 Cluster: Os06g0726200 protein; n=2; cellular
organisms|Rep: Os06g0726200 protein - Oryza sativa
subsp. japonica (Rice)
Length = 214
Score = 32.7 bits (71), Expect = 8.2
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = -3
Query: 660 PLC-IKPPSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAP 484
P C + + S +TR + PR TPTTP S P TP P PP S+ +P
Sbjct: 80 PSCRARSSTRCFSTATTRRARPRTSTPTTP-----SSPPPTPSRASPQPATPPPASARSP 134
Query: 483 SAY 475
++
Sbjct: 135 RSW 137
>UniRef50_Q5BZG2 Cluster: SJCHGC06992 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06992 protein - Schistosoma
japonicum (Blood fluke)
Length = 185
Score = 32.7 bits (71), Expect = 8.2
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = -3
Query: 663 SPLCIKPPSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAP 484
SP PP P + TS +S+P HTP + ++ P P P L+P L+ P
Sbjct: 71 SPSASYPPPPPVPDTSINASHP--HTPPSLPSSTFDSPPSQP------PHLRPLLTIPLP 122
Query: 483 SAYLTPSSLGMAKGV-SPP 430
S++L L + SPP
Sbjct: 123 SSHLLTLPLSPTPPLPSPP 141
>UniRef50_Q4Q064 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 707
Score = 32.7 bits (71), Expect = 8.2
Identities = 22/75 (29%), Positives = 32/75 (42%)
Frame = -3
Query: 660 PLCIKPPSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPS 481
PL + P S R +P+ TP+ LTS + + P P S +A +
Sbjct: 355 PLSMIPQGELQEVESARRRSPKALTPSASPLTSFAFSKGEPSVSWCTTSEHPANSPKAGA 414
Query: 480 AYLTPSSLGMAKGVS 436
TPS+ MA+G S
Sbjct: 415 LTSTPSASNMARGAS 429
>UniRef50_Q2WBY1 Cluster: Fork head protein; n=1; Platynereis
dumerilii|Rep: Fork head protein - Platynereis dumerilii
(Dumeril's clam worm)
Length = 517
Score = 32.7 bits (71), Expect = 8.2
Identities = 22/62 (35%), Positives = 33/62 (53%)
Frame = -3
Query: 609 SSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVSPP 430
S+NP TPT+ LTS S++ L+ L PLS + +A+ +GMA G+ P
Sbjct: 398 STNPNVSTPTSHPLTSTSVSELS--------ALTRPLSHDNAAAH-HAVMMGMASGLGGP 448
Query: 429 YF 424
+F
Sbjct: 449 HF 450
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,770,771
Number of Sequences: 1657284
Number of extensions: 13823493
Number of successful extensions: 47806
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 44206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47465
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50826451017
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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