Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14e23
(590 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41679 Cluster: Uncharacterized 28.5 kDa protein in PK2... 342 4e-93
UniRef50_O10361 Cluster: Uncharacterized 26.5 kDa protein; n=7; ... 173 3e-42
UniRef50_O00254 Cluster: Proteinase-activated receptor 3 precurs... 37 0.41
UniRef50_UPI00006CB411 Cluster: hypothetical protein TTHERM_0047... 35 1.2
UniRef50_Q6AMT7 Cluster: Putative uncharacterized protein; n=1; ... 34 2.9
UniRef50_P83119 Cluster: Probable G-protein coupled receptor Mth... 34 2.9
UniRef50_UPI00006CA6E0 Cluster: hypothetical protein TTHERM_0068... 33 5.0
UniRef50_A2Y5Q5 Cluster: Putative uncharacterized protein; n=2; ... 33 5.0
UniRef50_A2F5D1 Cluster: Putative uncharacterized protein; n=1; ... 33 6.6
UniRef50_Q89C13 Cluster: Sensor protein; n=5; cellular organisms... 32 8.7
UniRef50_Q7UM72 Cluster: Putative uncharacterized protein; n=1; ... 32 8.7
UniRef50_Q22KY4 Cluster: Neurohypophysial hormones, N-terminal D... 32 8.7
UniRef50_A0D034 Cluster: Chromosome undetermined scaffold_329, w... 32 8.7
>UniRef50_P41679 Cluster: Uncharacterized 28.5 kDa protein in
PK2-LEF7 intergenic region; n=5;
Nucleopolyhedrovirus|Rep: Uncharacterized 28.5 kDa
protein in PK2-LEF7 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 247
Score = 342 bits (840), Expect = 4e-93
Identities = 160/195 (82%), Positives = 168/195 (86%), Gaps = 3/195 (1%)
Frame = -1
Query: 578 MGLFTCCTKYTRLSTDTKVKFPYAALSYINVTLCTYTAMLVGYMATFN---EFEYLQYWF 408
MGLF CCTKYTRLSTDTK+KFPY ALSYINVTLCTYTAMLVGYM TFN E +YLQYW
Sbjct: 1 MGLFACCTKYTRLSTDTKMKFPYVALSYINVTLCTYTAMLVGYMVTFNDSSELKYLQYWL 60
Query: 407 LLSFLMSVALNAPTLWTAFKTTEAHEVVYEMKLFQAMYFSNVLLNYVVFSDNQMGTNFVF 228
LLSFLMSV LNAPTLWT KTTEAHEV+YEMKLF AMYFSNVLLNYVVF DNQMGTNFVF
Sbjct: 61 LLSFLMSVVLNAPTLWTMLKTTEAHEVIYEMKLFHAMYFSNVLLNYVVFLDNQMGTNFVF 120
Query: 227 VNNLIHCCVXXXXXXXXXXXLGHTMGAYTDYRYAKSCYMVILFVSVMSFTIVMGLECLKT 48
VNNLIHCCV LGHTMG YTDY+Y KSCYMVILFVSVMS TIVMGLECLKT
Sbjct: 121 VNNLIHCCVLFMIFVELLILLGHTMGTYTDYQYVKSCYMVILFVSVMSVTIVMGLECLKT 180
Query: 47 KLVDSSLMFNSFMCA 3
KL+D+SLMFN+F+CA
Sbjct: 181 KLIDNSLMFNAFVCA 195
>UniRef50_O10361 Cluster: Uncharacterized 26.5 kDa protein; n=7;
Nucleopolyhedrovirus|Rep: Uncharacterized 26.5 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 243
Score = 173 bits (420), Expect = 3e-42
Identities = 80/188 (42%), Positives = 121/188 (64%), Gaps = 3/188 (1%)
Frame = -1
Query: 578 MGLFTCCTKYTRLSTDTKVKFPYAALSYINVTLCTYTAMLVGYMA---TFNEFEYLQYWF 408
M +F C+ Y RLS +T+ +FP+AA+SY+NVTLC + A++ GY++ TF E ++LQYW
Sbjct: 1 MNVFKRCSGYIRLSNETRARFPFAAMSYVNVTLCAFGAVVAGYLSAANTFVELQFLQYWL 60
Query: 407 LLSFLMSVALNAPTLWTAFKTTEAHEVVYEMKLFQAMYFSNVLLNYVVFSDNQMGTNFVF 228
+LS ++ +NA TL+ TEAHE+VYE+K+ AMYF+N L+N+ + + + + V
Sbjct: 61 MLSLFVTGLINA-TLFLRQGKTEAHEIVYELKMLHAMYFANALVNHGLLATERSAVSAVL 119
Query: 227 VNNLIHCCVXXXXXXXXXXXLGHTMGAYTDYRYAKSCYMVILFVSVMSFTIVMGLECLKT 48
V NL+HCC LGH +G Y+DYRYAK+CYM+ LFVS I +G +K+
Sbjct: 120 VANLVHCCALVLLFVELTVLLGHALGTYSDYRYAKACYMLALFVSAAVAVITVGASGMKS 179
Query: 47 KLVDSSLM 24
+ +L+
Sbjct: 180 APLCDNLL 187
>UniRef50_O00254 Cluster: Proteinase-activated receptor 3 precursor;
n=16; Amniota|Rep: Proteinase-activated receptor 3
precursor - Homo sapiens (Human)
Length = 374
Score = 36.7 bits (81), Expect = 0.41
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Frame = -1
Query: 569 FTCCTKYTRLSTDTKVKFPYAALSYINVTLCTYTAMLVGYMATFNEFEYLQYWFLLSFLM 390
F+ +T + K+K P + S+++V T +GY+ + + + +LL F++
Sbjct: 53 FSALEGWTGATITVKIKCPEESASHLHVKNAT-----MGYLTSSLSTKLIPAIYLLVFVV 107
Query: 389 SVALNAPTLWTA-FKTTEAHEVVYEMKLFQAMYFSNVLLNYVVFSDNQMGTNFVF 228
V NA TLW F+T V+ L A + V L + + + + G N+VF
Sbjct: 108 GVPANAVTLWMLFFRTRSICTTVFYTNLAIADFLFCVTLPFKI-AYHLNGNNWVF 161
>UniRef50_UPI00006CB411 Cluster: hypothetical protein
TTHERM_00475020; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00475020 - Tetrahymena
thermophila SB210
Length = 274
Score = 35.1 bits (77), Expect = 1.2
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = -1
Query: 398 FLMSVALNAPTLWTAFKTTEAHEVVYEMKLFQAMYFSNVLLNYVVFSDNQMGTNFVFV 225
FL+S+AL A K +E+ + + +FQ Y N+ NY + +NQ VF+
Sbjct: 4 FLLSLALVTGLASYALKNFSDYELYFPIAIFQISYAFNIYYNYAIRVENQNMNQGVFI 61
>UniRef50_Q6AMT7 Cluster: Putative uncharacterized protein; n=1;
Desulfotalea psychrophila|Rep: Putative uncharacterized
protein - Desulfotalea psychrophila
Length = 739
Score = 33.9 bits (74), Expect = 2.9
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -1
Query: 503 LSYINVTLCTYTAMLVGYMATFNEFEYLQYWFLLSFL 393
L Y+N T+ + +LVG++ F F + W+LLS+L
Sbjct: 367 LRYLNSTVLNWLKVLVGFIPAFLTFSLTKDWWLLSYL 403
>UniRef50_P83119 Cluster: Probable G-protein coupled receptor
Mth-like 12 precursor; n=1; Drosophila melanogaster|Rep:
Probable G-protein coupled receptor Mth-like 12
precursor - Drosophila melanogaster (Fruit fly)
Length = 488
Score = 33.9 bits (74), Expect = 2.9
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -1
Query: 425 YLQYWFLLSFLMSVALNAPTLWTAFKTTEAHEVVYEMKLFQAMYFSNVLL-NYVVFSDNQ 249
Y++Y+F +S + ++ + LW F + HE Y ++ + + V+FS NQ
Sbjct: 280 YMKYFFSMSSYLWFSVVSFHLWELFTSLNRHEPQYRFLIYNTFVWCTAAIPTVVIFSMNQ 339
Query: 248 MGTN 237
M N
Sbjct: 340 MWEN 343
>UniRef50_UPI00006CA6E0 Cluster: hypothetical protein
TTHERM_00683140; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00683140 - Tetrahymena
thermophila SB210
Length = 313
Score = 33.1 bits (72), Expect = 5.0
Identities = 24/94 (25%), Positives = 48/94 (51%)
Frame = -1
Query: 485 TLCTYTAMLVGYMATFNEFEYLQYWFLLSFLMSVALNAPTLWTAFKTTEAHEVVYEMKLF 306
+L ++ + +TFN+FE LQ +L + S++ N +L +FK + + + + +
Sbjct: 200 SLTKIESLSINMSSTFNQFEQLQIQSILHSIQSLS-NLHSLKISFKNCKLN--THFLPIL 256
Query: 305 QAMYFSNVLLNYVVFSDNQMGTNFVFVNNLIHCC 204
+ + SN+ N +VF D + N +FV + C
Sbjct: 257 K-QFLSNIAAN-MVFLDLDISYNPLFVKRITFYC 288
>UniRef50_A2Y5Q5 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 420
Score = 33.1 bits (72), Expect = 5.0
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Frame = -1
Query: 518 FPYAALSYINVTLCTYTAMLVGY--MATFNEFEYLQYWFLLSFL---MSVALNAPTL-WT 357
FP A + V AML MAT E+LQ+WF+LS L ++VALN + WT
Sbjct: 235 FPSARARAVAVAGHLNRAMLAALVSMATILAVEFLQWWFMLSLLPEAIAVALNVAIMAWT 294
>UniRef50_A2F5D1 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 320
Score = 32.7 bits (71), Expect = 6.6
Identities = 17/78 (21%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Frame = -1
Query: 503 LSYINVTLCTYTAMLVGYMATFNEFEYLQYW--FLLSFLMSVALNAPTLWTAFKTTEAHE 330
L+++ ++ ++++ V Y + +FE +Y+ +S L++VA+ T +++FK TE+ +
Sbjct: 27 LTFLQLSSFLFSSIYVVYRISKKQFELSRYYNVIFISILVTVAMIL-TNYSSFKLTESTQ 85
Query: 329 VVYEMKLFQAMYFSNVLL 276
+++ + SN+ +
Sbjct: 86 ILFRSPRLIPIMISNIFI 103
>UniRef50_Q89C13 Cluster: Sensor protein; n=5; cellular
organisms|Rep: Sensor protein - Bradyrhizobium japonicum
Length = 764
Score = 32.3 bits (70), Expect = 8.7
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -1
Query: 473 YTAMLVGYMATFNEFEYLQYWFLLSFLMSVALNAPTLWTAFKTTEA 336
YT M MA +Y W +LS L++++ + LW AF+ T A
Sbjct: 123 YTGMAAMRMAAL--IQYDPRWVVLSILIAISASIVALWLAFRNTNA 166
>UniRef50_Q7UM72 Cluster: Putative uncharacterized protein; n=1;
Pirellula sp.|Rep: Putative uncharacterized protein -
Rhodopirellula baltica
Length = 118
Score = 32.3 bits (70), Expect = 8.7
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 457 WDTWQHSTNLNIYNTGFCCRF*CPWR 380
W+ W+ S N ++N F CR C WR
Sbjct: 21 WNYWRTSWNKRVFNRPFTCRPGCTWR 46
>UniRef50_Q22KY4 Cluster: Neurohypophysial hormones, N-terminal Domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Neurohypophysial hormones, N-terminal Domain
containing protein - Tetrahymena thermophila SB210
Length = 1594
Score = 32.3 bits (70), Expect = 8.7
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 19 LNIKLLSTSFVFKHSKPITIVKLITETNNITI*HDLAYR*SVYAPIVWPNRISN-SRNII 195
+N L + SF+F PIT+V IT+ N++ S+ +V PN+ +N N+I
Sbjct: 1419 INYTLFAISFIFVFLAPITMVIFITKCKNLSDPQIQQQFGSLIGGLVVPNQQNNPENNLI 1478
Query: 196 KSTQ 207
K Q
Sbjct: 1479 KEHQ 1482
>UniRef50_A0D034 Cluster: Chromosome undetermined scaffold_329,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_329,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 784
Score = 32.3 bits (70), Expect = 8.7
Identities = 27/121 (22%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Frame = -1
Query: 569 FTCCTKYTRLSTDTKVKFPYAALSYINVTLCTYTAMLVG-YMATFNEFEYLQYWFLLSFL 393
+T K S+ + F Y + V C +L+ ++ + ++YL +F+
Sbjct: 204 YTSYYKIYDFSSIEQENFIYEIDNNFFVYNCLRKRVLIQIFLHSAQVYDYLSNFFIYDQN 263
Query: 392 MSVALNAPTLWTAFKTTEAHEVVYEMKLFQAMYFSNVLLNYVVFSDNQMGTNFVFVNNLI 213
++ L+ + + H + ++ K+FQ F N LL V++D NF+++ NL+
Sbjct: 264 TNIGR---LLYCRTQNIQQHNIKFDHKIFQIKQFQNYLL---VYTD---VNNFIYIINLL 314
Query: 212 H 210
H
Sbjct: 315 H 315
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 562,212,725
Number of Sequences: 1657284
Number of extensions: 10770475
Number of successful extensions: 25805
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 24908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25797
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41073165837
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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