Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14e16
(749 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41042 Cluster: 40S ribosomal protein S4; n=38; Eukaryo... 437 e-121
UniRef50_P62701 Cluster: 40S ribosomal protein S4, X isoform; n=... 426 e-118
UniRef50_UPI000065EA48 Cluster: similar to 40S ribosomal protein... 236 e-112
UniRef50_P49204 Cluster: 40S ribosomal protein S4-2; n=55; Eukar... 374 e-102
UniRef50_UPI00005A08FF Cluster: PREDICTED: similar to 40S riboso... 239 7e-88
UniRef50_UPI0000499069 Cluster: 40S ribosomal protein S4; n=2; E... 318 1e-85
UniRef50_A2ECC6 Cluster: 40S ribosomal protein S4-C, putative; n... 283 3e-75
UniRef50_UPI0000D9EB72 Cluster: PREDICTED: similar to 40S riboso... 280 3e-74
UniRef50_Q9XG32 Cluster: 40S ribosomal protein S4; n=1; Guillard... 279 7e-74
UniRef50_UPI00006CBCC9 Cluster: Ribosomal family S4e containing ... 273 3e-72
UniRef50_Q7KJQ3 Cluster: 40S ribosomal protein S4; n=9; Eukaryot... 266 3e-70
UniRef50_Q8SRB9 Cluster: 40S RIBOSOMAL PROTEIN S4; n=1; Encephal... 175 1e-42
UniRef50_Q9YF85 Cluster: 30S ribosomal protein S4e; n=4; Desulfu... 139 8e-32
UniRef50_Q8TW18 Cluster: 30S ribosomal protein S4e; n=1; Methano... 122 7e-27
UniRef50_P62428 Cluster: 30S ribosomal protein S4e; n=12; Euryar... 121 2e-26
UniRef50_A5UL76 Cluster: Ribosomal protein S4e; n=2; Methanobact... 120 4e-26
UniRef50_A1RWS3 Cluster: Ribosomal protein S4E, central; n=1; Th... 119 7e-26
UniRef50_Q56230 Cluster: 30S ribosomal protein S4e; n=3; Thermop... 115 1e-24
UniRef50_A3H986 Cluster: Ribosomal protein S4E; n=1; Caldivirga ... 114 2e-24
UniRef50_Q40941 Cluster: 40S ribosomal protein S4; n=2; Bigelowi... 109 9e-23
UniRef50_Q8ZTD3 Cluster: 30S ribosomal protein S4e; n=4; Pyrobac... 108 1e-22
UniRef50_A3CT09 Cluster: Ribosomal protein S4E, central; n=3; Me... 105 1e-21
UniRef50_Q8PV38 Cluster: 30S ribosomal protein S4e; n=4; Euryarc... 103 5e-21
UniRef50_Q0W1X6 Cluster: 30S ribosomal protein S4E; n=2; Euryarc... 102 1e-20
UniRef50_O05634 Cluster: 30S ribosomal protein S4e; n=5; Sulfolo... 101 1e-20
UniRef50_UPI000038E22A Cluster: hypothetical protein Faci_030011... 101 2e-20
UniRef50_Q12ZT9 Cluster: Ribosomal protein S4E; n=1; Methanococc... 96 7e-19
UniRef50_Q673R6 Cluster: Ribosomal protein S4; n=2; environmenta... 95 1e-18
UniRef50_P62429 Cluster: 30S ribosomal protein S4e; n=1; Nanoarc... 93 5e-18
UniRef50_Q6L1B5 Cluster: 30S ribosomal protein S4e; n=1; Picroph... 93 9e-18
UniRef50_A2SPL4 Cluster: Ribosomal protein S4E, central; n=1; Me... 87 6e-16
UniRef50_Q00TF1 Cluster: Chromosome 17 contig 1, DNA sequence; n... 78 3e-13
UniRef50_P22510 Cluster: 30S ribosomal protein S4E; n=6; Halobac... 77 5e-13
UniRef50_A0RVY5 Cluster: Ribosomal protein S4E; n=2; Thermoprote... 77 6e-13
UniRef50_A5BV74 Cluster: Putative uncharacterized protein; n=1; ... 47 6e-04
UniRef50_A0BHK0 Cluster: Chromosome undetermined scaffold_108, w... 41 0.028
UniRef50_Q2VZ09 Cluster: Predicted SAM-dependent methyltransfera... 41 0.037
UniRef50_A7ATI1 Cluster: Putative uncharacterized protein; n=1; ... 39 0.11
UniRef50_A6WAT7 Cluster: Putative uncharacterized protein; n=1; ... 39 0.15
UniRef50_Q8BY81 Cluster: 3 days neonate thymus cDNA, RIKEN full-... 38 0.26
UniRef50_UPI000038E364 Cluster: hypothetical protein Faci_030005... 37 0.46
UniRef50_Q9KI83 Cluster: VrrB; n=9; Bacillus cereus group|Rep: V... 37 0.46
UniRef50_UPI0000E814A8 Cluster: PREDICTED: similar to MEGF6; n=1... 36 1.1
UniRef50_Q9KI91 Cluster: VrrB; n=17; Bacteria|Rep: VrrB - Bacill... 36 1.1
UniRef50_A6PQ76 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_Q17LX3 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_A5KAS9 Cluster: Tryptophan-rich antigen; n=3; cellular ... 36 1.1
UniRef50_A4M369 Cluster: Cobyrinic acid a,c-diamide synthase; n=... 36 1.4
UniRef50_A0VC89 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_A6GEF6 Cluster: Hydrolase, alpha/beta fold family prote... 35 1.9
UniRef50_A0YER0 Cluster: Putative uncharacterized protein; n=1; ... 35 1.9
UniRef50_UPI0000DB7528 Cluster: PREDICTED: similar to Homeobox p... 35 2.5
UniRef50_UPI00006614B8 Cluster: Homolog of Homo sapiens "Keratin... 35 2.5
UniRef50_A7CME0 Cluster: Putative uncharacterized protein precur... 35 2.5
UniRef50_A5BNN8 Cluster: Putative uncharacterized protein; n=1; ... 35 2.5
UniRef50_Q1B492 Cluster: LigA; n=1; Mycobacterium sp. MCS|Rep: L... 34 3.3
UniRef50_A5P378 Cluster: Putative uncharacterized protein; n=3; ... 34 3.3
UniRef50_A0TIV4 Cluster: Putative uncharacterized protein; n=2; ... 34 3.3
UniRef50_Q8SZT1 Cluster: GH27708p; n=18; Eumetazoa|Rep: GH27708p... 34 3.3
UniRef50_Q0UL67 Cluster: Predicted protein; n=1; Phaeosphaeria n... 34 3.3
UniRef50_UPI0000DB6DB9 Cluster: PREDICTED: hypothetical protein;... 34 4.3
UniRef50_UPI00006A1FE8 Cluster: Coiled-coil domain-containing pr... 33 5.7
UniRef50_Q2CHG7 Cluster: Parallel beta-helix repeat protein; n=4... 33 5.7
UniRef50_A5WHY9 Cluster: TonB-dependent receptor; n=1; Psychroba... 33 5.7
UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1; ... 33 5.7
UniRef50_Q5QMN1 Cluster: Putative uncharacterized protein P0419B... 33 5.7
UniRef50_Q0DW21 Cluster: Os03g0101400 protein; n=1; Oryza sativa... 33 5.7
UniRef50_Q9UAY0 Cluster: Putative uncharacterized protein; n=2; ... 33 5.7
UniRef50_A7TPB7 Cluster: Putative uncharacterized protein; n=1; ... 33 5.7
UniRef50_UPI0000D5573E Cluster: PREDICTED: similar to Tyrosine-p... 33 7.5
UniRef50_Q93VS6 Cluster: At1g67870/T23K23_28; n=2; Arabidopsis t... 33 7.5
UniRef50_Q0J1G4 Cluster: Os09g0441900 protein; n=2; Oryza sativa... 33 7.5
UniRef50_Q01J77 Cluster: OSIGBa0152K17.10 protein; n=5; Oryza sa... 33 7.5
UniRef50_Q7REV3 Cluster: Drosophila melanogaster CG8797 gene pro... 33 7.5
UniRef50_Q4XGP3 Cluster: Pc-fam-3 protein putative; n=1; Plasmod... 33 7.5
UniRef50_P04929 Cluster: Histidine-rich glycoprotein precursor; ... 33 7.5
UniRef50_Q4TFG9 Cluster: Chromosome undetermined SCAF4487, whole... 33 9.9
UniRef50_Q89Y09 Cluster: Blr0146 protein; n=1; Bradyrhizobium ja... 33 9.9
UniRef50_A0VKI5 Cluster: ABC-type Fe3+ transport system periplas... 33 9.9
UniRef50_Q54XL5 Cluster: Putative uncharacterized protein; n=1; ... 33 9.9
>UniRef50_P41042 Cluster: 40S ribosomal protein S4; n=38;
Eukaryota|Rep: 40S ribosomal protein S4 - Drosophila
melanogaster (Fruit fly)
Length = 261
Score = 437 bits (1077), Expect = e-121
Identities = 199/246 (80%), Positives = 222/246 (90%)
Frame = -3
Query: 747 APKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRXKYALTGNEVLKIVKQRLIKVD 568
APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNR KYAL G EV KIV QRL+KVD
Sbjct: 14 APKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLVKVD 73
Query: 567 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 388
GKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G
Sbjct: 74 GKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGA 133
Query: 387 KNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 208
K VP+LVTHDGRTIRYPDPLI NDS+Q+DIA+ KI D+IKF+SGNLCMITGGRNLGRVG
Sbjct: 134 KGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVG 193
Query: 207 TIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTIAEERD 28
T+V+RERHPGSFDIVHIKDS GH FATRL NVFIIGKG K YISLP+GKG++L+IAEERD
Sbjct: 194 TVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVKLSIAEERD 253
Query: 27 KRIAAK 10
KR+AAK
Sbjct: 254 KRLAAK 259
>UniRef50_P62701 Cluster: 40S ribosomal protein S4, X isoform;
n=137; Eukaryota|Rep: 40S ribosomal protein S4, X
isoform - Homo sapiens (Human)
Length = 263
Score = 426 bits (1050), Expect = e-118
Identities = 190/246 (77%), Positives = 220/246 (89%)
Frame = -3
Query: 747 APKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRXKYALTGNEVLKIVKQRLIKVD 568
APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNR KYALTG+EV KI QR IK+D
Sbjct: 14 APKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKID 73
Query: 567 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 388
GKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G
Sbjct: 74 GKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGT 133
Query: 387 KNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 208
K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 134 KGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
Query: 207 TIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTIAEERD 28
I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IGKG K +ISLPRGKGIRLTIAEERD
Sbjct: 194 VITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERD 253
Query: 27 KRIAAK 10
KR+AAK
Sbjct: 254 KRLAAK 259
>UniRef50_UPI000065EA48 Cluster: similar to 40S ribosomal protein
S4, X isoform (LOC126235), mRNA; n=1; Takifugu
rubripes|Rep: similar to 40S ribosomal protein S4, X
isoform (LOC126235), mRNA - Takifugu rubripes
Length = 291
Score = 236 bits (577), Expect(2) = e-112
Identities = 100/140 (71%), Positives = 126/140 (90%)
Frame = -3
Query: 429 KYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGN 250
+YKLCKVK++ G K +P+LVTHD RTIRYPDPLIKVND++++D+ T KI DFIKF++ N
Sbjct: 152 QYKLCKVKKILIGTKGIPHLVTHDARTIRYPDPLIKVNDTVRIDLDTGKITDFIKFDTSN 211
Query: 249 LCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLP 70
+CM+TGG NLGR+G I +RERHPGSFD+VH+KDSTG++FATRL+N+F+IGKG K ++SLP
Sbjct: 212 MCMVTGGANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLP 271
Query: 69 RGKGIRLTIAEERDKRIAAK 10
RGKGIRLTIAEERDKR+AAK
Sbjct: 272 RGKGIRLTIAEERDKRLAAK 291
Score = 192 bits (467), Expect(2) = e-112
Identities = 88/107 (82%), Positives = 95/107 (88%)
Frame = -3
Query: 747 APKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRXKYALTGNEVLKIVKQRLIKVD 568
APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNR KYALTG+EV KI QR IK+D
Sbjct: 14 APKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKID 73
Query: 567 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 427
GKVRTD TYP GFMDV+SI+KT E FRLIYDVKGRFT+HRIT EEAK
Sbjct: 74 GKVRTDITYPTGFMDVISIDKTGEHFRLIYDVKGRFTVHRITAEEAK 120
>UniRef50_P49204 Cluster: 40S ribosomal protein S4-2; n=55;
Eukaryota|Rep: 40S ribosomal protein S4-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 262
Score = 374 bits (919), Expect = e-102
Identities = 170/249 (68%), Positives = 206/249 (82%)
Frame = -3
Query: 747 APKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRXKYALTGNEVLKIVKQRLIKVD 568
APK WMLDKLGG +AP+PS+GPHK RECLPLV+ +RNR KYALT EV+ I+ QR I+VD
Sbjct: 14 APKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVD 73
Query: 567 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 388
GKVRTD TYPAGFMDVVSI KTNE FRL+YD KGRF +H I EEAK+KLCKV+ + G
Sbjct: 74 GKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQ 133
Query: 387 KNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 208
K +PYL T+DGRTIRYPDPLIK ND+I+LD+ KI++FIKF+ GN+ M+TGGRN GRVG
Sbjct: 134 KGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVG 193
Query: 207 TIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTIAEERD 28
I +RE+H GSF+ +HI+DSTGH FATRL NV+ IGKGTK ++SLP+GKGI+LTI EE
Sbjct: 194 VIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEAR 253
Query: 27 KRIAAKVAA 1
KR+A++ AA
Sbjct: 254 KRLASQQAA 262
>UniRef50_UPI00005A08FF Cluster: PREDICTED: similar to 40S ribosomal
protein S4, X isoform; n=3; Eutheria|Rep: PREDICTED:
similar to 40S ribosomal protein S4, X isoform - Canis
familiaris
Length = 240
Score = 239 bits (585), Expect(2) = 7e-88
Identities = 102/151 (67%), Positives = 128/151 (84%)
Frame = -3
Query: 477 DVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLD 298
D KGRF +HRITPEEAKYKL KV+++ G K +P+LVTHD RTIRYPDPLIK+ND+IQ+D
Sbjct: 76 DTKGRFAVHRITPEEAKYKLGKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKMNDTIQID 135
Query: 297 IATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLN 118
+ T KI DF KF++GNLCM+TGG NLGR+G I +RE HPGSFD+VH+KD+ G++FATRL+
Sbjct: 136 LETGKITDFFKFDTGNLCMVTGGTNLGRIGVITNRENHPGSFDVVHVKDANGNSFATRLS 195
Query: 117 NVFIIGKGTKAYISLPRGKGIRLTIAEERDK 25
N+F+IGKG +ISLP GKGIR TIAEE+ +
Sbjct: 196 NIFVIGKGNIPWISLPHGKGIRFTIAEEKKR 226
Score = 108 bits (259), Expect(2) = 7e-88
Identities = 49/62 (79%), Positives = 53/62 (85%)
Frame = -3
Query: 747 APKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRXKYALTGNEVLKIVKQRLIKVD 568
APK WMLDKL GV+AP PSTGPHKLRECLPL+IFLRNR KYALTG+EV KI Q IK+D
Sbjct: 14 APKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKIRMQHFIKMD 73
Query: 567 GK 562
GK
Sbjct: 74 GK 75
>UniRef50_UPI0000499069 Cluster: 40S ribosomal protein S4; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S4 - Entamoeba histolytica HM-1:IMSS
Length = 326
Score = 318 bits (780), Expect = 1e-85
Identities = 140/243 (57%), Positives = 185/243 (76%)
Frame = -3
Query: 747 APKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRXKYALTGNEVLKIVKQRLIKVD 568
AP WML KLGG +AP+PS GPH ++ECLPL++ LRNR YAL G EV IVK R IK+D
Sbjct: 14 APHHWMLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIVKNRTIKID 73
Query: 567 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 388
GK+RTD YP GFMDV+SI +T E FRL+Y+ K RF + +T E+AK+KLCK+++ G
Sbjct: 74 GKIRTDTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAKFKLCKIEKRVLGT 133
Query: 387 KNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 208
+PY+VTHDGRTIRYP P ++ ND+I+L++ T KI+DF+KF+ GN M+ GG +GRVG
Sbjct: 134 GAIPYIVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNTAMMIGGNGMGRVG 193
Query: 207 TIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTIAEERD 28
IV RE HPGSF+IVHIKD+ G+TF TRLNNVF+IGKGT+ ++LP KGI+ + ++ +
Sbjct: 194 VIVKREVHPGSFEIVHIKDAKGNTFTTRLNNVFVIGKGTETLVNLPLDKGIKKPLLQQVN 253
Query: 27 KRI 19
+ I
Sbjct: 254 ETI 256
>UniRef50_A2ECC6 Cluster: 40S ribosomal protein S4-C, putative; n=4;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein
S4-C, putative - Trichomonas vaginalis G3
Length = 269
Score = 283 bits (694), Expect = 3e-75
Identities = 129/237 (54%), Positives = 173/237 (72%)
Frame = -3
Query: 747 APKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRXKYALTGNEVLKIVKQRLIKVD 568
AP W+L K G +A PSTGPHKLRECLP+ IFLR+R KYALT E + IVK+RL+KVD
Sbjct: 28 APHHWLLAKSAGKFASHPSTGPHKLRECLPINIFLRDRLKYALTAKEAVAIVKRRLVKVD 87
Query: 567 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 388
GKVRT+ YP G MDV+ + K+NELFR+IYD KGRF +H I +EA +KL +V + G
Sbjct: 88 GKVRTNYRYPTGLMDVIELGKSNELFRIIYDCKGRFCVHHIEAKEASFKLLRVNQFKIGA 147
Query: 387 KNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 208
K +P++VTHDGRTI Y DP ++V+D+++ +I T ++ IKF+ G++ M+T G N+GRVG
Sbjct: 148 KGIPHVVTHDGRTISYVDPSVRVHDALKFNIKTGEVESVIKFKVGDVAMVTAGGNVGRVG 207
Query: 207 TIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTIAE 37
TI E+ SFDIVH+KD++G FATR+ NVF+IG+ ISLP +G+R +I E
Sbjct: 208 TIQKIEKQMASFDIVHLKDTSGAVFATRIMNVFVIGENEHPLISLPAREGVRPSILE 264
>UniRef50_UPI0000D9EB72 Cluster: PREDICTED: similar to 40S ribosomal
protein S4, X isoform; n=1; Macaca mulatta|Rep:
PREDICTED: similar to 40S ribosomal protein S4, X
isoform - Macaca mulatta
Length = 244
Score = 280 bits (686), Expect = 3e-74
Identities = 133/222 (59%), Positives = 166/222 (74%)
Frame = -3
Query: 735 WMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRXKYALTGNEVLKIVKQRLIKVDGKVR 556
WMLDKL GV+A RPSTGPHKLRECLP IFLRNR KYALTG+EV KI Q IKVDGK+R
Sbjct: 29 WMLDKLTGVFAARPSTGPHKLRECLPH-IFLRNRLKYALTGDEVKKICMQWFIKVDGKIR 87
Query: 555 TDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVP 376
TD P MDV+SI+K E F LIY + RF +HRITPEE KYKLCK++++ K +P
Sbjct: 88 TDNNLPYWIMDVISIDKMGEDFCLIYGINRRFALHRITPEEVKYKLCKMRKIFVRAKGIP 147
Query: 375 YLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVS 196
+LV HD T+R+PD LIKVND+IQ+D+ T KI +KF++GNLC++TGG N GR+G I +
Sbjct: 148 HLVIHDIHTVRHPDSLIKVNDTIQIDLETGKI-TALKFDTGNLCLVTGGGNWGRIGVITN 206
Query: 195 RERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLP 70
RERHP SFD H+KD+ ++F+ +F+I KG K +ISLP
Sbjct: 207 RERHPVSFDTFHVKDANSNSFSI----IFVIDKGNKPWISLP 244
>UniRef50_Q9XG32 Cluster: 40S ribosomal protein S4; n=1; Guillardia
theta|Rep: 40S ribosomal protein S4 - Guillardia theta
(Cryptomonas phi)
Length = 257
Score = 279 bits (683), Expect = 7e-74
Identities = 129/241 (53%), Positives = 177/241 (73%), Gaps = 1/241 (0%)
Frame = -3
Query: 747 APKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRXKYALTGNEVLKIVKQRLIKVD 568
APK W+L+KLGG++APR S+GPHK + +PLVI +RN+ KY+ E L I+K+ I VD
Sbjct: 14 APKKWLLNKLGGIWAPRSSSGPHKKQNSIPLVIVIRNKLKYSTNQRESLNILKKNEIYVD 73
Query: 567 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 388
GKVR D +PAG MDV+SI+ T E +R++YD G F +HRIT +E+ +KLCKV RV+ G
Sbjct: 74 GKVRADKNFPAGVMDVISIKTTKENYRVLYDNVGHFFLHRITIKESMFKLCKVIRVSIGS 133
Query: 387 KNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 208
K +PY+VTHDGRTIR+P+ LIK NDSI LD+ K++DFIKF G+LC++ G N+GR+G
Sbjct: 134 KGIPYIVTHDGRTIRFPNLLIKSNDSIVLDLLNNKVIDFIKFSIGSLCVVIKGSNIGRIG 193
Query: 207 TIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIR-LTIAEER 31
++ GS IV +KD G +F+T+ N+F+IGKGTK++ISLPR +G+R LT + E
Sbjct: 194 VFINTIGGQGSDSIVCLKDFNGSSFSTQTKNLFVIGKGTKSFISLPRFRGLRTLTKSLEH 253
Query: 30 D 28
D
Sbjct: 254 D 254
>UniRef50_UPI00006CBCC9 Cluster: Ribosomal family S4e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal family S4e containing protein - Tetrahymena
thermophila SB210
Length = 370
Score = 273 bits (670), Expect = 3e-72
Identities = 125/232 (53%), Positives = 165/232 (71%), Gaps = 2/232 (0%)
Frame = -3
Query: 705 APRPSTGPHKLRECLPLVIFLRNRXKYALTGNEVLKIV--KQRLIKVDGKVRTDPTYPAG 532
A RPS GPHKLRE LPL + L+ R YAL G +V I+ K++ + VDGKVR D YP G
Sbjct: 138 ATRPSQGPHKLRESLPLSVLLKERLNYALNGRDVTLILNDKEQNVFVDGKVRRDKGYPTG 197
Query: 531 FMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGR 352
MDVV IEKT++ FR++YD KGRF + ++ EEAKYKL KV A GP +PY+VTHD R
Sbjct: 198 LMDVVRIEKTDQSFRILYDTKGRFVLKSLSKEEAKYKLLKVTAKAIGPNQIPYIVTHDSR 257
Query: 351 TIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSF 172
TIR+P+P IK+ D+++ D+ KI +F ESGN+C I G N+GRVG I E+H GSF
Sbjct: 258 TIRFPNPEIKIGDTLKYDLVNNKIENFAHLESGNVCYIQQGNNIGRVGIIQHIEKHQGSF 317
Query: 171 DIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTIAEERDKRIA 16
DI H+KD+ G+ FATRL N+F++G+G K++I LP G G+R TI EER ++ +
Sbjct: 318 DICHVKDAKGNAFATRLGNIFVLGQGKKSWIELPSGDGVRETILEERKRKFS 369
>UniRef50_Q7KJQ3 Cluster: 40S ribosomal protein S4; n=9;
Eukaryota|Rep: 40S ribosomal protein S4 - Leishmania
major
Length = 273
Score = 266 bits (653), Expect = 3e-70
Identities = 125/249 (50%), Positives = 166/249 (66%), Gaps = 1/249 (0%)
Frame = -3
Query: 747 APKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRXKYALTGNEVLKIVKQRLIKVD 568
APK WML KL GV+APRP GPHKLRECLPL++ +RNR KYAL E I++Q L+ VD
Sbjct: 11 APKDWMLSKLTGVFAPRPRPGPHKLRECLPLLVIIRNRLKYALNAREGEMILRQGLVHVD 70
Query: 567 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 388
R D YPAGFMDVV I KT + FRL+YDVKGRF + ++ EA+ KL KV + T
Sbjct: 71 NHPRRDGKYPAGFMDVVEIPKTGDRFRLMYDVKGRFALVNLSEAEAQIKLMKVVNLYTAT 130
Query: 387 KNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 208
VP VTHDG IRYPDP + D+I ++ K +D IK G ++TGG N GR+G
Sbjct: 131 GRVPVAVTHDGHRIRYPDPHTSIGDTIVYNVKEKKCVDLIKNRQGKAVIVTGGANRGRIG 190
Query: 207 TIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKG-TKAYISLPRGKGIRLTIAEER 31
IV E HPG+F+I H+KD++G FATR N+F+IGK +++P+ +G+R+ + +ER
Sbjct: 191 EIVKVECHPGAFNIAHLKDASGAEFATRAANIFVIGKDLNNLQVTVPKQQGLRMNVIQER 250
Query: 30 DKRIAAKVA 4
++R+ A A
Sbjct: 251 EERLIAAEA 259
>UniRef50_Q8SRB9 Cluster: 40S RIBOSOMAL PROTEIN S4; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S4 -
Encephalitozoon cuniculi
Length = 268
Score = 175 bits (426), Expect = 1e-42
Identities = 89/248 (35%), Positives = 153/248 (61%), Gaps = 1/248 (0%)
Frame = -3
Query: 747 APKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRXKYALTGNEVLKIVKQRLIKVD 568
APK+WMLDK GG +A P++GPHK EC+PL + +YA E+ I+ ++ IKV+
Sbjct: 14 APKSWMLDKQGGTFALMPASGPHKKTECIPLGYLISRFLRYASNFKELSIILAEKNIKVN 73
Query: 567 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 388
G+VRT+ +P G DVVSIEKT E FR++Y+V +F +HRI+ EEA Y+L KV +
Sbjct: 74 GRVRTNSHFPVGLFDVVSIEKTGEHFRVLYNVHKKFHLHRISSEEASYRLTKVTKKYEN- 132
Query: 387 KNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 208
+ +PY+V+ G +IR+ DP I + +I++ T+K++++I + ++ G+ GRVG
Sbjct: 133 QGIPYIVSSCGLSIRFCDPAIDLGYTIKISNETSKVIEYIVPGPDKVIFVSRGKARGRVG 192
Query: 207 TIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK-AYISLPRGKGIRLTIAEER 31
+++ G + + D G+TF+ + +IG+ ++ +I+LP+ +GIR + E+
Sbjct: 193 -VINTISTQGKETVYGMTDFAGNTFSCTSKSCILIGESSENIWITLPKERGIRQSELEKI 251
Query: 30 DKRIAAKV 7
+ ++ +
Sbjct: 252 NAQLGEMI 259
>UniRef50_Q9YF85 Cluster: 30S ribosomal protein S4e; n=4;
Desulfurococcales|Rep: 30S ribosomal protein S4e -
Aeropyrum pernix
Length = 253
Score = 139 bits (336), Expect = 8e-32
Identities = 85/238 (35%), Positives = 129/238 (54%), Gaps = 10/238 (4%)
Frame = -3
Query: 747 APKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRXKYALTGNEVLKIVKQRLIKVD 568
AP+ W + + +A +P GPH + LPL++ +RN YA T E K++ + +VD
Sbjct: 15 APRFWPILRKEYKWAVKPRPGPHPAEKSLPLLLIVRNVLGYAQTAREARKLISEGHFRVD 74
Query: 567 GKVRTDPTYPAGFMDVVSIEKTNELFRLI-YDVKGRFTIHRITPEEAKYKLCKVKRVATG 391
G VR D +P GFMDV+ + T E FR++ Y VK F +H I EE K +++ T
Sbjct: 75 GVVRKDYKFPVGFMDVIEVVDTGEKFRMLPYPVK-FFKLHPIPEEEGDLKPVRIENKTTV 133
Query: 390 PKNVPYLVTHDGRTI--RYPDP------LIKVNDSIQLDIATTKIMDFIKFESGNLCMIT 235
L HDGR I R DP + + D++ + + +I IKF G + +I
Sbjct: 134 KGGHVQLNLHDGRNILVRVKDPRNPVEDVYRTMDTLLITVPGQEIKGHIKFGEGAIAIIV 193
Query: 234 GGRNLGRVGTIVSRERHPG-SFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRG 64
GGRN+GRVG + S ++ G +V ++D++G+ F T L+ VF+IG + ISLP G
Sbjct: 194 GGRNVGRVGVVKSVQKGWGRKRTLVTLEDASGNLFQTSLDYVFVIGL-DRPVISLPEG 250
>UniRef50_Q8TW18 Cluster: 30S ribosomal protein S4e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S4e -
Methanopyrus kandleri
Length = 260
Score = 122 bits (295), Expect = 7e-27
Identities = 76/233 (32%), Positives = 118/233 (50%), Gaps = 16/233 (6%)
Frame = -3
Query: 747 APKAWMLD-KLGGVYAPRPSTGPHKLRECLPLVIFLRNRXKYALTGNEVLKIVKQRLIKV 571
AP AW + K GG +APRP GPH + +PL+I +R+ YA E KI+ + I V
Sbjct: 17 APYAWPIPRKEGGKFAPRPYPGPHTMDTSVPLLILVRDMLGYADYAREARKIITRGEIYV 76
Query: 570 DGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATG 391
DG VR +P +P G MDVV I +T + +R++ + R + I+ EEA+ K+C++K
Sbjct: 77 DGVVRKEPKFPVGIMDVVEIPRTGDRYRVVMNEHHRLDVVPISEEEARVKVCRIKNKTYV 136
Query: 390 PKNVPYLVTHDGRT--IRYPDP------LIKVNDSIQLDI------ATTKIMDFIKFESG 253
+ HDG+ + DP + V DS+ L++ + K++D I FE G
Sbjct: 137 RGGNLQITMHDGKNWLVEIEDPTDPKEDVYSVGDSLVLELPEPDSGESWKVVDHIPFEEG 196
Query: 252 NLCMITGGRNLGRVGTIVSRERHPG-SFDIVHIKDSTGHTFATRLNNVFIIGK 97
GR+ G VG +V + G D++ +++ G F T + IGK
Sbjct: 197 VWVYAMTGRHSGEVGRVVEIQTFEGPQEDLITVENPEGDQFQTTKGRLIAIGK 249
>UniRef50_P62428 Cluster: 30S ribosomal protein S4e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S4e -
Methanococcus maripaludis
Length = 244
Score = 121 bits (291), Expect = 2e-26
Identities = 75/227 (33%), Positives = 116/227 (51%), Gaps = 10/227 (4%)
Frame = -3
Query: 747 APKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRXKYALTGNEVLKIVKQRLIKVD 568
AP W L + + RPS GPH + + LPL++ +R+ KYA E KI++ I +D
Sbjct: 15 APANWQLPRKVKTFTVRPSPGPHSMDKSLPLLLVVRDVLKYADNAREAKKIIQTGKILID 74
Query: 567 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV--KRVAT 394
G R + +PAG MDV+SI + +E + +++D GR ++ + ++ KLCK+ K V
Sbjct: 75 GLKRKEYKHPAGLMDVLSIPEMDETYLVLFDESGRISLKK--TDKTDVKLCKIVNKTVVK 132
Query: 393 GPKNVPYLVTHDGR--------TIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMI 238
G N+ L HDGR + + + K DS+ + I I + F G L I
Sbjct: 133 G-GNI-QLNLHDGRNQIVKVSDAAKAEEDVYKTGDSVLISIPEQSIAGHVAFGEGKLAYI 190
Query: 237 TGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGK 97
TGG+++G IV E DIV +++ G F T VFI+G+
Sbjct: 191 TGGKHVGEFAKIVEVENRALYSDIVTLENKDGEKFKTVKPYVFIVGQ 237
>UniRef50_A5UL76 Cluster: Ribosomal protein S4e; n=2;
Methanobacteriaceae|Rep: Ribosomal protein S4e -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 242
Score = 120 bits (289), Expect = 4e-26
Identities = 71/229 (31%), Positives = 117/229 (51%), Gaps = 4/229 (1%)
Frame = -3
Query: 747 APKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRXKYALTGNEVLKIVKQRLIKVD 568
APK W + + +PS G H + L L + +R+ K A E +I+ + VD
Sbjct: 15 APKTWPIHPKEDTWTVKPSAGSHSIENSLSLTLVIRDILKLADNSREAKRIINSGNVLVD 74
Query: 567 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 388
G+V D +P GFMD++ I KT E++R++ D KGR +++I EE KLCK+ +T
Sbjct: 75 GRVIKDYKFPVGFMDIIEIPKTGEVYRVLLDKKGRLQLNKI--EENDSKLCKIVNKSTIK 132
Query: 387 KNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 208
+ HDG+ + + V D I L + +I + + + G +ITGG++ G +G
Sbjct: 133 GGKIQVNLHDGKNVIIDENDYNVGDVIDLKVPDHEINEVFELKEGACVLITGGKHTGELG 192
Query: 207 T----IVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISL 73
T IV+ +P + + I++S F T + F++G+ A ISL
Sbjct: 193 TVSEIIVNESSNPNT---IIIENSAKDEFLTLKDYAFVVGEDAPA-ISL 237
>UniRef50_A1RWS3 Cluster: Ribosomal protein S4E, central; n=1;
Thermofilum pendens Hrk 5|Rep: Ribosomal protein S4E,
central - Thermofilum pendens (strain Hrk 5)
Length = 251
Score = 119 bits (287), Expect = 7e-26
Identities = 73/226 (32%), Positives = 114/226 (50%), Gaps = 9/226 (3%)
Frame = -3
Query: 747 APKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRXKYALTGNEVLKIVKQRLIKVD 568
AP W + + V+ +PS GPH L +P+ I LR+ YA T E +I+ R+I+VD
Sbjct: 17 APPFWPIKRKEYVWTVKPSPGPHSLLSSIPIGIVLRDVFGYAKTMKEARRILASRVIEVD 76
Query: 567 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 388
G+V TD +P G MDV+ I + +R++ D + I PEEA YKL +++R T
Sbjct: 77 GRVVTDYKFPVGLMDVLHIIPEEKYYRVVPDPARKLRFVEIKPEEAGYKLAQIRRKMTVK 136
Query: 387 KNVPYLVTHDGRTI-------RYPDPL-IKVNDSIQLDIATTKIMDFIKFESGNLCMITG 232
HDGR + Y + K D++ + I I+ + FE G L ++
Sbjct: 137 NGDLQFTLHDGRNVLIRKGSEAYSTAISYKTYDALLITIPRQSIVSHVPFEVGTLAIVVD 196
Query: 231 GRNLGRVGTI-VSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGK 97
GRN+G +G I ++ S +V ++D++G T L V +GK
Sbjct: 197 GRNVGFMGRINAIQQVFKRSRALVELEDASGAKSRTILQYVLPVGK 242
>UniRef50_Q56230 Cluster: 30S ribosomal protein S4e; n=3;
Thermoplasma|Rep: 30S ribosomal protein S4e -
Thermoplasma acidophilum
Length = 235
Score = 115 bits (277), Expect = 1e-24
Identities = 69/214 (32%), Positives = 109/214 (50%), Gaps = 1/214 (0%)
Frame = -3
Query: 708 YAPRPSTGPHKLRECLPLVIFLRNRXKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGF 529
+ P P+ G H + + L+ +R+ K + E +I+ L+KVDGK + + GF
Sbjct: 23 WGPTPNPGMHPKDQSVTLLSIIRDYLKLSDKEREAARILANGLVKVDGKTVREKKFAVGF 82
Query: 528 MDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRT 349
MDV+ I E +R++Y+ +G + + T E A KL KV+ P N L THDGRT
Sbjct: 83 MDVIEIN--GESYRVVYNDQGALVLMKETKERASMKLLKVRSKVIAPGNRIQLGTHDGRT 140
Query: 348 IRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPG-SF 172
D KV D + + KI + IK + GN IT G ++ + GTI E G S
Sbjct: 141 FITDDKSKKVGDVWAVSVPDMKISEIIKMQPGNKAYITAGSHVNQTGTISKIEAKEGSSA 200
Query: 171 DIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLP 70
++VH ++ F+T ++VF+IG +++ P
Sbjct: 201 NLVHFQEG----FSTIKDHVFMIGSSKFSFVLSP 230
>UniRef50_A3H986 Cluster: Ribosomal protein S4E; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S4E -
Caldivirga maquilingensis IC-167
Length = 237
Score = 114 bits (275), Expect = 2e-24
Identities = 67/220 (30%), Positives = 107/220 (48%), Gaps = 3/220 (1%)
Frame = -3
Query: 747 APKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRXKYALTGNEVLKIVKQRLIKVD 568
+P+ W +++ G ++ +PS GPH +PL + LR+ YA T E I+ + +KVD
Sbjct: 9 SPEWWPVERKGAPWSIKPSPGPHPANSSIPLAVLLRDVFHYAKTLREARLIIGKGYVKVD 68
Query: 567 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 388
GKVR D YP G MDV+ + NE +R+I D RI EA K+C+++
Sbjct: 69 GKVRRDYKYPVGLMDVIELTPINEYYRIIPDPVNFLRPIRIDKSEAGVKVCRIEDKTMVK 128
Query: 387 KNVPYLVTHDGRTI---RYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLG 217
L HDGR I + + S+ +++ K+MD+ + + G N+G
Sbjct: 129 AGKIQLNLHDGRNIIVDQDEGRKYETLGSVVVNLEDGKLMDYYPMQPNQYVIAFNGVNVG 188
Query: 216 RVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGK 97
R GT+++ R D + + F T LN + +IGK
Sbjct: 189 RHGTLINWVRSFRKRDAIATVKAKDSEFRTVLNYLLVIGK 228
>UniRef50_Q40941 Cluster: 40S ribosomal protein S4; n=2;
Bigelowiella natans|Rep: 40S ribosomal protein S4 -
Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 242
Score = 109 bits (261), Expect = 9e-23
Identities = 55/214 (25%), Positives = 106/214 (49%)
Frame = -3
Query: 714 GVYAPRPSTGPHKLRECLPLVIFLRNRXKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPA 535
G++ + S+GPH + + L+ ++ A E K+VK + V+GK +P
Sbjct: 25 GIFNTKISSGPHSKVKSVSLLNIIKKFFHLADNNQEAQKVVKTGFLYVNGKKCLSHKFPI 84
Query: 534 GFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDG 355
MD +S N+ +R++ G+ T++ I E K+CKV ++ ++T D
Sbjct: 85 SLMDTISFPLANKHYRVLLSKAGKLTVYEINQNEKDLKICKVIKIINASSKNKIIITDDL 144
Query: 354 RTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGS 175
R ++ IKV DS+ + +I+ +KFE G+LC+IT G++LG + I +
Sbjct: 145 RELKINYAKIKVEDSLLIKTINDEIVYALKFEVGSLCLITRGKHLGTIAVIKEIRKTKSL 204
Query: 174 FDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISL 73
++H++ G + +++ +IG+ + +SL
Sbjct: 205 RKMIHLEKIDGKKLTKKCSDLLVIGESKTSILSL 238
>UniRef50_Q8ZTD3 Cluster: 30S ribosomal protein S4e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S4e - Pyrobaculum
aerophilum
Length = 238
Score = 108 bits (260), Expect = 1e-22
Identities = 67/186 (36%), Positives = 94/186 (50%), Gaps = 4/186 (2%)
Frame = -3
Query: 747 APKAWMLD-KLGGVYAPRPSTGPHKLRECLPLVIFLRNRXKYALTGNEVLKIVKQRLIKV 571
AP W + K GGV+ RPS GPH L LPL + +R+ KYA T +E I+ + +KV
Sbjct: 9 APAWWPIPRKKGGVWVVRPSPGPHSLAYSLPLALIIRDVLKYAKTMHEARYIISRGYVKV 68
Query: 570 DGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATG 391
DG VR D +P G MDV+ I T E++R++ D + + I+ EEA KL +V+
Sbjct: 69 DGVVRRDYKFPVGLMDVIEIVPTGEVYRVVPDADKYYNLLPISTEEAALKLLRVEGKTMV 128
Query: 390 PKNVPYLVTHDGR---TIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNL 220
L HDGR T IK DS+ D+ I I + G ++ G N+
Sbjct: 129 KGGRIQLHFHDGRNLITTLEAGKQIKTFDSVLYDLRNKAIKAHIPLKLGVNAVVIHGSNV 188
Query: 219 GRVGTI 202
G GT+
Sbjct: 189 GFSGTL 194
>UniRef50_A3CT09 Cluster: Ribosomal protein S4E, central; n=3;
Methanomicrobiales|Rep: Ribosomal protein S4E, central -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 242
Score = 105 bits (252), Expect = 1e-21
Identities = 71/228 (31%), Positives = 107/228 (46%), Gaps = 7/228 (3%)
Frame = -3
Query: 747 APKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRXKYALTGNEVLKIVKQRLIKVD 568
AP +W + K + + + GPH LP+ ++LR A +EV KI+ QR + V+
Sbjct: 10 APGSWHIPKKVQKFVMKTAPGPHNAG-ALPVGVWLREHIGLAQNASEVKKILHQRDVLVN 68
Query: 567 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 388
G+ D G D+VSI K + +R+ DVKG I E AK +LCK++ T
Sbjct: 69 GRACKDSRMGLGVFDIVSIPKLGKHYRIQLDVKGNLVAIEIPAESAKTRLCKIRNKTTVK 128
Query: 387 KNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATT-----KIMDFIKFESGNLCMITGGRN 223
L G + D K DS+ + + T +I+D + GN+ MI GG++
Sbjct: 129 GGKVQLNFAFGANV-LADNTYKAKDSVVVTLGTDGEDRFRIVDHFPYAEGNVAMIVGGKH 187
Query: 222 LGRVGTIVSRERHPGSF--DIVHIKDSTGHTFATRLNNVFIIGKGTKA 85
G+VG IV R S ++ DS G F T VF++G+ A
Sbjct: 188 SGKVGRIVEIIRTASSVPNHVILTDDSAGERFETIEEYVFMVGRSAIA 235
>UniRef50_Q8PV38 Cluster: 30S ribosomal protein S4e; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S4e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 235
Score = 103 bits (247), Expect = 5e-21
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 1/217 (0%)
Frame = -3
Query: 744 PKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRXKYALTGNEVLKIVKQRLIKVDG 565
PK+W + + G + GPH LPL + +R+ K E +I+ + + VDG
Sbjct: 10 PKSWKVGRKGNKWISTTRPGPHSQARSLPLGLIIRDVLKLVDNNREGKRILSEGKVLVDG 69
Query: 564 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 385
R D +P G DV+++ NE +R++ D KGR ++++ E KLC++ T
Sbjct: 70 ISRKDLRFPVGLFDVITLPLVNEAYRMLQDEKGRLVLYKLN-ETNVNKLCRINNKTTVKG 128
Query: 384 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 205
L +DG I + DS+ L I ++ +KFE GNL M+ GG++ G G
Sbjct: 129 GKIQLNLNDGTNILGSND-YGTKDSLILSIPDKHVVKHLKFEVGNLAMVIGGQHSGETGK 187
Query: 204 IVS-RERHPGSFDIVHIKDSTGHTFATRLNNVFIIGK 97
I+ RE + V I T F T + V +IG+
Sbjct: 188 IMEIREVKSSRHNTVMISGET--DFETIEDYVIVIGE 222
>UniRef50_Q0W1X6 Cluster: 30S ribosomal protein S4E; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S4E -
Uncultured methanogenic archaeon RC-I
Length = 234
Score = 102 bits (244), Expect = 1e-20
Identities = 64/221 (28%), Positives = 103/221 (46%)
Frame = -3
Query: 747 APKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRXKYALTGNEVLKIVKQRLIKVD 568
AP+ W + + + +P G H +PLV+ LR+ K A +E+ KI+ + + VD
Sbjct: 11 APRTWPITRKTSKWVAKPMPGAHSEERGMPLVVVLRDLLKVADNTSEIKKILHEGKVLVD 70
Query: 567 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 388
GKVR D Y G D +SI N +R++ + G+F H + +A K+CK+
Sbjct: 71 GKVRKDYRYTVGMFDTISIPAINANYRVVIGMDGKF--HLVPVTDASAKICKIVNKTALR 128
Query: 387 KNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 208
L HDG T+ + K DS+ L + KI + G+L M+T G++ G +G
Sbjct: 129 GGKIQLNLHDGTTMIASND-YKTKDSVILKMPERKIDQHFTYAVGSLVMVTEGKHSGEIG 187
Query: 207 TIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKA 85
+ + S + + F T VF+IGK + A
Sbjct: 188 KVKEIKVVRSSAPNTVVITTPEGDFETIEQYVFVIGKDSPA 228
>UniRef50_O05634 Cluster: 30S ribosomal protein S4e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S4e -
Sulfolobus acidocaldarius
Length = 244
Score = 101 bits (243), Expect = 1e-20
Identities = 70/209 (33%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Frame = -3
Query: 699 RPSTGPHKLRECLPLVIFLRNRXKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDV 520
R GPHK++E +PL I L+ K T E +I+ + VDGKVR D YP G MDV
Sbjct: 25 RSRAGPHKIQESVPLAILLKYYLKAVDTTREAKRIIFDGKVLVDGKVRRDYKYPVGLMDV 84
Query: 519 VSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRY 340
V I + R+I D T I+ E+AKYK ++ T V L DGR I
Sbjct: 85 VEIPSADLRVRIIPDNVRYLTTINISREDAKYKFVRIMNKTTLKSGVLQLNLEDGRNILL 144
Query: 339 P-DPLIKVN----DSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTI--VSRERHP 181
+ L + N ++++++ KI + G MI GGRN G G I + ++
Sbjct: 145 KGEELSQYNLPTLTTLKIELPEQKITTAYTIKEGVYAMIIGGRNAGLHGKISKIQLAKYK 204
Query: 180 G-SFDIVHIKDSTGHTFATRLNNVFIIGK 97
+ +V ++ G TF T L NV IG+
Sbjct: 205 RIKYSLVTLEGKDGSTFQTNLINVMAIGE 233
>UniRef50_UPI000038E22A Cluster: hypothetical protein Faci_03001139;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001139 - Ferroplasma acidarmanus fer1
Length = 241
Score = 101 bits (242), Expect = 2e-20
Identities = 61/201 (30%), Positives = 105/201 (52%), Gaps = 2/201 (0%)
Frame = -3
Query: 696 PSTGPHKLRECLPLVIFLRNRXKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVV 517
P+ H + +P++I LR+ K E+ +I+ ++KVDG++ D +P GFMDV+
Sbjct: 28 PTPATHSKEDSIPMLIALRDYLKLGDKEREITRILNNNMVKVDGRIVKDRRFPVGFMDVL 87
Query: 516 SIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK-VKRVATGPKNVPYLVTHDGRTIRY 340
SI+ + ++YD KG+ I + P KL K VK+ G + L HDG+TI
Sbjct: 88 SIDTLENDYIIVYDRKGKLVIRQNAPGNKGLKLFKVVKKTIIGTGKI-QLGFHDGKTIVT 146
Query: 339 PDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSF-DIV 163
I +D + + I +I + +K G+ ITGG ++G + TI S E S ++V
Sbjct: 147 DRKDINTSDVLLMKIPDLEIENVLKIAEGDKVFITGGSHVGELATIKSIEVKKSSVKNMV 206
Query: 162 HIKDSTGHTFATRLNNVFIIG 100
++ + F+T + +F++G
Sbjct: 207 YLNEG----FSTIKDYMFVVG 223
>UniRef50_Q12ZT9 Cluster: Ribosomal protein S4E; n=1;
Methanococcoides burtonii DSM 6242|Rep: Ribosomal
protein S4E - Methanococcoides burtonii (strain DSM
6242)
Length = 236
Score = 96.3 bits (229), Expect = 7e-19
Identities = 53/181 (29%), Positives = 89/181 (49%)
Frame = -3
Query: 744 PKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRXKYALTGNEVLKIVKQRLIKVDG 565
PK+W + K + GPH + +PL + LR+ E +++ + + VDG
Sbjct: 11 PKSWQISKKSNKWITSTRPGPHNRLQSIPLAVILRDMLGVVDNRAEAKRVLSEGNVLVDG 70
Query: 564 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 385
R D +P G MD+++I N +R++ D K R ++++ A KLC+++ + +
Sbjct: 71 VARKDLRFPVGLMDIITIPLNNVEYRVMLDGKSRLVLNKLDGTGAD-KLCRIEGKTSIKE 129
Query: 384 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 205
+ +DG I DSI L + K++ IK+E GNL MI GG + G VG+
Sbjct: 130 GKIQMRLNDGVNI-IGSNNYNTKDSIILSVPDKKVVKHIKYEVGNLAMIVGGSHAGEVGS 188
Query: 204 I 202
I
Sbjct: 189 I 189
>UniRef50_Q673R6 Cluster: Ribosomal protein S4; n=2; environmental
samples|Rep: Ribosomal protein S4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 232
Score = 95.5 bits (227), Expect = 1e-18
Identities = 62/217 (28%), Positives = 102/217 (47%), Gaps = 2/217 (0%)
Frame = -3
Query: 744 PKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRXKYALTGNEVLKIVKQRLIKVDG 565
P++W L + ++ +P+ G H C+PL + LR+ A E +++ R + VDG
Sbjct: 12 PRSWPLTRKTDIWVQKPNPGGHSDEMCMPLGVILRDVLDLAHNLREAKRMLATRQVLVDG 71
Query: 564 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 385
++ TD G MDV+++ + + FR I DV G+ I+ + A KLC+V +T
Sbjct: 72 RIETDLGRGVGLMDVLTVGE--DSFRCILDVNGKLRYRSISDKAAASKLCRVMGKSTITD 129
Query: 384 NVPYLVTHDGRTIRYPD-PLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 208
+ HDGR I D L D++ + + + F G +TGG ++G
Sbjct: 130 GKTQIHLHDGRNILVSDAKLYDSGDTLVISLPDQSVAGHHPFSKGATAYLTGGSHIGITA 189
Query: 207 TIVSRE-RHPGSFDIVHIKDSTGHTFATRLNNVFIIG 100
+VSR+ + + V D F T + VFIIG
Sbjct: 190 KVVSRDIKRSSKPNEVQFPD-----FGTVADYVFIIG 221
>UniRef50_P62429 Cluster: 30S ribosomal protein S4e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S4e -
Nanoarchaeum equitans
Length = 234
Score = 93.5 bits (222), Expect = 5e-18
Identities = 55/183 (30%), Positives = 92/183 (50%), Gaps = 2/183 (1%)
Frame = -3
Query: 744 PKAWMLD-KLGGVYAPRPSTGPHKLRECLPLVIFLRNRXKYALTGNEVLKIVKQRLIKVD 568
P+ W + K G + +PS GPH +P+ ++LR+ A EV ++ + VD
Sbjct: 15 PRTWPVPRKSRGYWIVKPSPGPHSKEFAMPIAVWLRDYLGLAENMREVRYLLNNGKVLVD 74
Query: 567 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK-VKRVATG 391
G+ D +P G DV++I + NE +R++ D +G+ + +I EEA K K +++V+
Sbjct: 75 GRPIKDYKFPVGLFDVLAIPEINEYYRVLLDERGKLYLKKIDKEEANIKYGKIIRKVSVR 134
Query: 390 PKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRV 211
+ Y +T DGRT D K + + +I KI + I E I G++ GR+
Sbjct: 135 GGKIQYTLT-DGRTF-LGDNSYKTHYGVVYEIPNFKIREVIPLEKDRKAYIIRGKHTGRI 192
Query: 210 GTI 202
G I
Sbjct: 193 GVI 195
>UniRef50_Q6L1B5 Cluster: 30S ribosomal protein S4e; n=1;
Picrophilus torridus|Rep: 30S ribosomal protein S4e -
Picrophilus torridus
Length = 234
Score = 92.7 bits (220), Expect = 9e-18
Identities = 69/227 (30%), Positives = 108/227 (47%), Gaps = 1/227 (0%)
Frame = -3
Query: 747 APKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRXKYALTGNEVLKIVKQRLIKVD 568
AP+ + + +A G HK +PL+I LR+ K E+ +I+ L+ VD
Sbjct: 10 APRKLKIARKSRFWAVNSLPGSHKKDSSIPLLIALRDYLKLGDKEREITRILTNSLVMVD 69
Query: 567 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 388
GKV + GFMD +++ + L + YD KG+ I E KL +VK
Sbjct: 70 GKVVKERRRGIGFMDTLTVSGNDYL--VSYDRKGKLVILPKPGETKGLKLLRVKGKTYVK 127
Query: 387 KNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 208
+ HDG T+ IK DS+ + I +I+D +KF GN ITGG ++G +
Sbjct: 128 GGRIQISFHDGSTMVTDRKDIKNGDSVLVKIPKKEIVDVLKFAPGNRVFITGGSHVGEIA 187
Query: 207 TIVSRE-RHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLP 70
TI S E + ++VH+ + F+T + VF++G K S+P
Sbjct: 188 TIKSIEIKSSSGENMVHMNEG----FSTVSSYVFVMG-SPKYTFSMP 229
>UniRef50_A2SPL4 Cluster: Ribosomal protein S4E, central; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S4E, central - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 239
Score = 86.6 bits (205), Expect = 6e-16
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 4/220 (1%)
Frame = -3
Query: 747 APKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRXKYALTGNEVLKIVKQRLIKVD 568
AP AW + + Y S+GPH LP+ I+LR+ ++AL EV KI+ R + ++
Sbjct: 9 APDAWQIARKESKYVVSTSSGPHD-GSALPIGIWLRDHMQFALNTKEVRKILHDRQVLLN 67
Query: 567 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 388
G + TD D++S K ++ + ++ D KGR + I+ + AK +L KV T
Sbjct: 68 GHIVTDEHIGIDVFDIISFPKIDKHYMILVDEKGRHNEYEISADAAKLQLVKVANKTTIK 127
Query: 387 KNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIA---TTKIMDFIKFESGNLCMITGGRNLG 217
+ G + K DS+ + IA + + GN+ +I GG++
Sbjct: 128 GGKTQINLTSGANF-IGEENCKGKDSLVIGIAGDDRFAVQQHFPYAVGNMAIIIGGQHTM 186
Query: 216 RVGTIVSRERHPGSF-DIVHIKDSTGHTFATRLNNVFIIG 100
+ G +V S + V I+D+ G+ F T + V++IG
Sbjct: 187 KTGKLVEILVQESSLPNRVIIEDADGNKFETIEDYVYMIG 226
>UniRef50_Q00TF1 Cluster: Chromosome 17 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 17 contig 1, DNA
sequence - Ostreococcus tauri
Length = 197
Score = 77.8 bits (183), Expect = 3e-13
Identities = 50/151 (33%), Positives = 79/151 (52%)
Frame = +1
Query: 73 QRDVRLRALADYEHVVQPRGEGVSRGVLDVHNVEGAGMSLAGHDGAHTPQVTASRDHTQV 252
+RD RL A D EHV + R + ++ GVL VHN EG + LA D V + DH Q
Sbjct: 43 KRDHRLVARTDGEHVRRARRKLLTGGVLQVHNFEGTDVLLAALDHPDATGVVTTGDHAQS 102
Query: 253 PRLKLDEVHNLRSCNV*LDGIVDFDKWVWIADGAAIMRYQVRNILRSGRHTLDFTQLVLS 432
++LD + +L +V +G+ D + + +GAA+++ R+ L QLVL
Sbjct: 103 ADVELDRIGDLVRRDVDHNGVTLLDHGIRVTNGAAVVQTDARHALVPELLAPHLAQLVLR 162
Query: 433 LLRGDTVDCESALNIID*TKQFISLLN*DNI 525
D V ES+L ++D + FI+L + D++
Sbjct: 163 FDSLDAVHNESSLGVVDEPEVFIALFDGDDV 193
>UniRef50_P22510 Cluster: 30S ribosomal protein S4E; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S4E -
Haloarcula marismortui (Halobacterium marismortui)
Length = 234
Score = 77.0 bits (181), Expect = 5e-13
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 2/216 (0%)
Frame = -3
Query: 744 PKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRXKYALTGNEVLKIVKQRLIKVDG 565
P +W +++ + + GPH +PL+I LR+ YA E + + + ++G
Sbjct: 11 PNSWPVERKTATFTVKAGAGPHG-ESGVPLLIVLRDVLGYADNRKEARYALNEDNVLING 69
Query: 564 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 385
K +D P G D+++ + E +R+ GR + I P+ A+ KL K+
Sbjct: 70 KAISDEERPVGMFDILAFTEREEYYRVFPGEGGRLALTAIDPDAAQSKLGKIVTKTHVSG 129
Query: 384 NVPYLVTHDGRT-IRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 208
L HDG T I D DSI + +++ ++E G L G + G VG
Sbjct: 130 GDVQLGLHDGETLIVEDDQTYDAGDSIVVGNEDGEVVAHFEYEEGALVTAVDGAHAGEVG 189
Query: 207 TIVSRERHPGSF-DIVHIKDSTGHTFATRLNNVFII 103
+ + PGS + V + G F T V +I
Sbjct: 190 EVEEIQVTPGSAQNNVIVSQDEGEGFETVEEYVVVI 225
>UniRef50_A0RVY5 Cluster: Ribosomal protein S4E; n=2;
Thermoprotei|Rep: Ribosomal protein S4E - Cenarchaeum
symbiosum
Length = 238
Score = 76.6 bits (180), Expect = 6e-13
Identities = 48/182 (26%), Positives = 78/182 (42%)
Frame = -3
Query: 747 APKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRXKYALTGNEVLKIVKQRLIKVD 568
AP W + + G + G H +P + LR+ T E K + ++VD
Sbjct: 15 APSFWGITRKGKRFVVTVHPGAHSKHRSIPSAVLLRDTLGAVSTLREAKKSIYSGNVEVD 74
Query: 567 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 388
G RT + G MDVV + T +++R++ +I E K+C+V +
Sbjct: 75 GVKRTSLHHGIGLMDVVELGGTGDIYRMVPSGGAILKPVKIEAAEKDRKICRVTSKTSIS 134
Query: 387 KNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 208
+ HDGR++ D + V DS + + KI+ + E G ++T G N G G
Sbjct: 135 GGRTQIGFHDGRSL-ISDEKVSVGDSCLVQVPGQKILKVARMEKGAHAVVTRGTNAGSTG 193
Query: 207 TI 202
TI
Sbjct: 194 TI 195
>UniRef50_A5BV74 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 186
Score = 46.8 bits (106), Expect = 6e-04
Identities = 28/89 (31%), Positives = 45/89 (50%)
Frame = +1
Query: 10 LGCDALVPXXXXXXXXXXXXRQRDVRLRALADYEHVVQPRGEGVSRGVLDVHNVEGAGMS 189
LGC L+ R+R RL LA+ EH+ Q + + G+L+V ++G +
Sbjct: 88 LGCKPLLGLFDDRQLDXLTLRKRYPRLCPLANDEHIAQTSCKFMPSGILNVDGLKGPLVL 147
Query: 190 LAGHDGAHTPQVTASRDHTQVPRLKLDEV 276
L D ++T V ++ H +P +K DEV
Sbjct: 148 LPVLDDSNTAPVPSTSHHDNIPNIKFDEV 176
>UniRef50_A0BHK0 Cluster: Chromosome undetermined scaffold_108,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_108,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 246
Score = 41.1 bits (92), Expect = 0.028
Identities = 25/76 (32%), Positives = 42/76 (55%)
Frame = -3
Query: 693 STGPHKLRECLPLVIFLRNRXKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVS 514
+T P +L + + L + ++ K L E L I KQ+ +KV+ K + DPT+P D S
Sbjct: 100 NTQPRELLKVVNLDPKIMDKEKKKL--EEELDINKQQKVKVEHKKQLDPTFPRNDFDKFS 157
Query: 513 IEKTNELFRLIYDVKG 466
IE +++ L+ + KG
Sbjct: 158 IEDMDQVLNLLSNYKG 173
>UniRef50_Q2VZ09 Cluster: Predicted SAM-dependent methyltransferase;
n=4; Rhodospirillaceae|Rep: Predicted SAM-dependent
methyltransferase - Magnetospirillum magneticum (strain
AMB-1 / ATCC 700264)
Length = 820
Score = 40.7 bits (91), Expect = 0.037
Identities = 23/52 (44%), Positives = 27/52 (51%)
Frame = -2
Query: 160 HQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGR 5
H+G TH R + RQGH+ V AA R GHP HHR G Q R G+
Sbjct: 24 HRGDQETHDRIGPQLVPGTRQGHQAVDHAAPR-GHPQHHREGHAQGLRPIGQ 74
>UniRef50_A7ATI1 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 546
Score = 39.1 bits (87), Expect = 0.11
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = -2
Query: 127 EVEQRVHNRQ---GHEGVHLAAARQGHPPHHRRGA 32
E Q+VH R+ G E +HL + HPPHHR+GA
Sbjct: 441 EYVQKVHEREMKSGEEAIHLPNSGTHHPPHHRKGA 475
>UniRef50_A6WAT7 Cluster: Putative uncharacterized protein; n=1;
Kineococcus radiotolerans SRS30216|Rep: Putative
uncharacterized protein - Kineococcus radiotolerans
SRS30216
Length = 189
Score = 38.7 bits (86), Expect = 0.15
Identities = 23/66 (34%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Frame = +3
Query: 18 RCACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSW-RRCVPWSP*CAQCRRSRDVSR 194
RC P R CP R ARC CP R RC RC P RR R +
Sbjct: 10 RCPARCPARCPARCPARCPARCPARCPARCPARCPARCPARCPAHCPNNGAARRWRPAAA 69
Query: 195 GTRWCP 212
R P
Sbjct: 70 ARRARP 75
Score = 34.3 bits (75), Expect = 3.3
Identities = 23/67 (34%), Positives = 25/67 (37%), Gaps = 1/67 (1%)
Frame = +3
Query: 21 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRCVPWSP*CAQC-RRSRDVSRG 197
C P R CP R ARC CP R RC RC P A+C +
Sbjct: 7 CFARCPARCPARCPARCPARCPARCPARCPARCPA---RCPARCP--ARCPAHCPNNGAA 61
Query: 198 TRWCPHA 218
RW P A
Sbjct: 62 RRWRPAA 68
>UniRef50_Q8BY81 Cluster: 3 days neonate thymus cDNA, RIKEN
full-length enriched library, clone:A630024D08
product:hypothetical Histidine-rich region containing
protein, full insert sequence; n=1; Mus musculus|Rep: 3
days neonate thymus cDNA, RIKEN full-length enriched
library, clone:A630024D08 product:hypothetical
Histidine-rich region containing protein, full insert
sequence - Mus musculus (Mouse)
Length = 139
Score = 37.9 bits (84), Expect = 0.26
Identities = 27/70 (38%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = -2
Query: 214 CGHHRVPRETSR-LLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRR 38
C HH R LLR + G H RH +R H RQ EGV R+GHP HH
Sbjct: 55 CAHHLSADPAERVLLRGVSPPGEALGHQRHY--ERQHVRQHVEGVGQHGERRGHPAHHHL 112
Query: 37 GAGQAHRSQG 8
Q H +G
Sbjct: 113 ---QHHEHEG 119
>UniRef50_UPI000038E364 Cluster: hypothetical protein Faci_03000514;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03000514 - Ferroplasma acidarmanus fer1
Length = 317
Score = 37.1 bits (82), Expect = 0.46
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = +1
Query: 493 QFISLLN*DNIHKSSRISRVSPNFPINLYEALFHNFQDFVSGQSILXTIPQENHQGQALA 672
Q I+ N +NI + I + N P E LFH F DFVSG ++ I + + + +A
Sbjct: 50 QVINTYNDENILEIINIPDIKYNIPDAEKEILFHKFIDFVSGNKLISGIMKIMYLDRKIA 109
Query: 673 QLV 681
Q +
Sbjct: 110 QFI 112
>UniRef50_Q9KI83 Cluster: VrrB; n=9; Bacillus cereus group|Rep: VrrB
- Bacillus anthracis
Length = 115
Score = 37.1 bits (82), Expect = 0.46
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = -2
Query: 169 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVH----LAAARQGHPPHHRRGAGQAHRSQ 11
H HQG HG H H +Q+VH+ GH +H L QGH HH SQ
Sbjct: 41 HHHHQGHHGHHGHH--QQQVHH-HGHHHIHPQAILYQTHQGHQGHHDHHGHHGQHSQ 94
Score = 36.7 bits (81), Expect = 0.61
Identities = 21/50 (42%), Positives = 22/50 (44%)
Frame = -2
Query: 169 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAH 20
H HQG HG H H H+ QGH G H QGH HH Q H
Sbjct: 17 HQGHQGHHG-HQGH------HHHQGHHGHHGHHHHQGHHGHHGHHQQQVH 59
>UniRef50_UPI0000E814A8 Cluster: PREDICTED: similar to MEGF6; n=1;
Gallus gallus|Rep: PREDICTED: similar to MEGF6 - Gallus
gallus
Length = 1119
Score = 35.9 bits (79), Expect = 1.1
Identities = 27/68 (39%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Frame = +3
Query: 51 GGCP--CRAAARCTPSCPCRL*TRCSTSWRRCVPWSP*CAQ----CRR-SRDVSRGTRWC 209
GGC C C CR R RRC PWSP CAQ C + RDV +G C
Sbjct: 128 GGCEHDCVQLTANQHQCRCRRQYRLREDGRRCAPWSP-CAQRNGGCMQLCRDV-QGAARC 185
Query: 210 PHAPSYGL 233
P Y L
Sbjct: 186 ECRPGYRL 193
>UniRef50_Q9KI91 Cluster: VrrB; n=17; Bacteria|Rep: VrrB - Bacillus
anthracis
Length = 265
Score = 35.9 bits (79), Expect = 1.1
Identities = 26/100 (26%), Positives = 34/100 (34%)
Frame = -2
Query: 310 HPVRHCNYEDYGLHQV*VGELVYDHGRP*LGACGHHRVPRETSRLLRHCAHQGLHGTHLR 131
H H + + HQ G + H + G GHH H HG H
Sbjct: 118 HHQGHHGHHGHHHHQGHHGHHGHHHHQGHHGHQGHHHHQGHHGHHGHHQQQVHHHGHHHI 177
Query: 130 HEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQ 11
H QGH+G H GH HH + + Q + Q
Sbjct: 178 HPQAILYQTHQGHQGHHDHHGHHGHQGHHGQHSQQHQQHQ 217
>UniRef50_A6PQ76 Cluster: Putative uncharacterized protein; n=1;
Victivallis vadensis ATCC BAA-548|Rep: Putative
uncharacterized protein - Victivallis vadensis ATCC
BAA-548
Length = 762
Score = 35.9 bits (79), Expect = 1.1
Identities = 26/71 (36%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = -2
Query: 208 HHRVP-RETSRLLRHCAHQGL-HGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRG 35
H VP R + RH A Q H H R EQR R+G L GHP H +
Sbjct: 112 HDPVPQRRLAGRRRHRAQQPRRHHRHQRDRGEQRAAQRKGDHRRKLLEHHAGHPLHEEQ- 170
Query: 34 AGQAHRSQGRR 2
Q HR +G+R
Sbjct: 171 -RQEHRQRGQR 180
>UniRef50_Q17LX3 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 450
Score = 35.9 bits (79), Expect = 1.1
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = -2
Query: 160 HQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRR 2
H G+ H H +Q+ H+ GH H + G PHHR S GR+
Sbjct: 287 HPGMEHHHHPHHHQQQHHSSHGHPAQHQGSG--GKQPHHRNNDSFNRNSSGRK 337
>UniRef50_A5KAS9 Cluster: Tryptophan-rich antigen; n=3; cellular
organisms|Rep: Tryptophan-rich antigen - Plasmodium
vivax
Length = 2662
Score = 35.9 bits (79), Expect = 1.1
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Frame = -2
Query: 169 HCAHQGLHGTHLRHEVEQRVHNRQGHE-GVHLAAARQG--HPPH-HRRGA--GQAHR 17
H H G H +H ++ VH Q H+ GVH A Q HP H H+RG QAH+
Sbjct: 389 HPKHAHQKGVHPKHAHQKGVHPEQAHQRGVHPEQAHQKGVHPKHAHQRGVHPEQAHQ 445
>UniRef50_A4M369 Cluster: Cobyrinic acid a,c-diamide synthase; n=6;
Bacteria|Rep: Cobyrinic acid a,c-diamide synthase -
Geobacter bemidjiensis Bem
Length = 311
Score = 35.5 bits (78), Expect = 1.4
Identities = 21/59 (35%), Positives = 26/59 (44%)
Frame = -2
Query: 178 LLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRR 2
+ H H+ HGT HE E R H+ HE +H GHP H G A + RR
Sbjct: 1 MCEHHNHEHSHGTD--HEHEHRHHDHHHHENLH-----HGHPHHATPQGGDAAPLEARR 52
>UniRef50_A0VC89 Cluster: Putative uncharacterized protein; n=1;
Delftia acidovorans SPH-1|Rep: Putative uncharacterized
protein - Delftia acidovorans SPH-1
Length = 511
Score = 35.5 bits (78), Expect = 1.4
Identities = 39/105 (37%), Positives = 44/105 (41%), Gaps = 16/105 (15%)
Frame = -2
Query: 286 EDYGLHQV*VGELVYDH-GRP*LGACGHHRVPRETSRLLRHCAHQ-G----LHGTHLRHE 125
ED+ H V G H GR LG HHR H HQ G LH +R
Sbjct: 69 EDHHRHVVGHGHAGRTHLGREQLG---HHRAEHAEEHGHEHADHQLGDQQLLHRGAVRQP 125
Query: 124 VEQRVHNRQ----GHEGVHLAA--ARQG----HPPHHRRGAGQAH 20
QRV + Q +G H AA RQG H HH+RGAG H
Sbjct: 126 GIQRVEHHQVADQRADGQHAAAHAVRQGAEERHDHHHQRGAGHLH 170
>UniRef50_A6GEF6 Cluster: Hydrolase, alpha/beta fold family protein;
n=1; Plesiocystis pacifica SIR-1|Rep: Hydrolase,
alpha/beta fold family protein - Plesiocystis pacifica
SIR-1
Length = 310
Score = 35.1 bits (77), Expect = 1.9
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = -3
Query: 735 WMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRXKYALTGNEVLKIVKQRLIKVDGKVR 556
W +D LGG+ K+R LP+ +F ++ G V +V + ++ G R
Sbjct: 216 WWVDFLGGLIELGDDAKLRKIRADLPIYVFAGDQDPVGAQGKNVRALVDR--LRATGHAR 273
Query: 555 TDPT-YPAGFMDVVSIEKTNELFRLIYDVKG 466
T YP G ++++ + +++ R + D G
Sbjct: 274 VKQTLYPGGRHEMINERERDQVTRELIDWLG 304
>UniRef50_A0YER0 Cluster: Putative uncharacterized protein; n=1;
marine gamma proteobacterium HTCC2143|Rep: Putative
uncharacterized protein - marine gamma proteobacterium
HTCC2143
Length = 110
Score = 35.1 bits (77), Expect = 1.9
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = -2
Query: 328 YQSQRFHPVRHCNYEDYGLHQV*VGELVY--DHGRP*LGACGHHRVPRETSRLLRHCAHQ 155
+ + + HP+R Y G+ V +LV DH R A HR R RL + H+
Sbjct: 31 FHAFKIHPLRIA-YRT-GIDVTLVQQLVSGEDHQRLFKAALARHRKSRRDQRLHKSLRHK 88
Query: 154 GLHGTHLRHEVEQRVHNRQGHE 89
G+ L+H++EQ +G +
Sbjct: 89 GIAQAELQHKIEQDYQETKGQK 110
>UniRef50_UPI0000DB7528 Cluster: PREDICTED: similar to Homeobox
protein araucan; n=1; Apis mellifera|Rep: PREDICTED:
similar to Homeobox protein araucan - Apis mellifera
Length = 677
Score = 34.7 bits (76), Expect = 2.5
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -2
Query: 142 THLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQ 11
TH H+ +H+ Q H G +Q H HH G H SQ
Sbjct: 429 THPHHQQYHHLHHHQQHYGQQQQQQQQQHQHHHMPSQGHHHHSQ 472
>UniRef50_UPI00006614B8 Cluster: Homolog of Homo sapiens
"Keratin-associated protein 10-4; n=1; Takifugu
rubripes|Rep: Homolog of Homo sapiens
"Keratin-associated protein 10-4 - Takifugu rubripes
Length = 353
Score = 34.7 bits (76), Expect = 2.5
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +3
Query: 21 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRCVP--WSP*CAQC 170
C CP R C C + RC SC C RC TS RC W P +C
Sbjct: 149 CWCPTYCRCPTSCWCPTSCRCPTSCWCPTYCRCPTSC-RCPTSCWCPTYCRC 199
Score = 34.7 bits (76), Expect = 2.5
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Frame = +3
Query: 21 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTS-WRRCVPWSP*CAQC 170
C CP R C C RC C C RC TS W W P C
Sbjct: 179 CRCPTSCRCPTSCWCPTYCRCPTYCRCPTSCRCPTSCWCPTYCWCPTSCWC 229
Score = 34.7 bits (76), Expect = 2.5
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +3
Query: 21 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRCVP--WSP*CAQC 170
C CP R C C + RC SC C RC TS RC W P +C
Sbjct: 275 CWCPTYCRCPTSCWCPTSCRCPTSCWCPTYCRCPTSC-RCPTSCWCPTYCRC 325
>UniRef50_A7CME0 Cluster: Putative uncharacterized protein
precursor; n=1; Ralstonia pickettii 12D|Rep: Putative
uncharacterized protein precursor - Ralstonia pickettii
12D
Length = 533
Score = 34.7 bits (76), Expect = 2.5
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = -2
Query: 235 GRP*LGACGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQ-RVHNRQGHEG-VHLAAARQ 62
G+P + A HRV +E + R H+ + H+ EQ RVH R G EG + A Q
Sbjct: 317 GKPAVQALEAHRVDQERADRRRDAPHRNVQRFHVDARAEQERVHQRDGAEGHEDVFAEEQ 376
Query: 61 GH 56
H
Sbjct: 377 AH 378
>UniRef50_A5BNN8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 906
Score = 34.7 bits (76), Expect = 2.5
Identities = 32/103 (31%), Positives = 44/103 (42%)
Frame = +2
Query: 227 RPPVIIHKFPDSNLMKSIIFVVAMSNWMESLTLISGSG*RMVRPSCVTKYGTFLGPVATR 406
RPP H SN + S + A S +S+TLI +R T TF+ VA
Sbjct: 298 RPPRTAHIAQSSNPLLSRLDSTASST-SQSITLIGSDYDAYLRYQAATS--TFVASVAQT 354
Query: 407 LTLHNLYLASSGVIRWIVNLPLTS*IRRNSSLVFSIETTSINP 535
+ + SS + WI++ + I N L SI TTS P
Sbjct: 355 DNVSVCFTQSSSLGPWILDSGASDHISGNKHLFSSITTTSALP 397
>UniRef50_Q1B492 Cluster: LigA; n=1; Mycobacterium sp. MCS|Rep: LigA
- Mycobacterium sp. (strain MCS)
Length = 634
Score = 34.3 bits (75), Expect = 3.3
Identities = 29/77 (37%), Positives = 34/77 (44%), Gaps = 8/77 (10%)
Frame = -2
Query: 208 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRV----HNRQGHEGVHLAAARQGHPPH-- 47
HHR +R RH H G R E+R+ H R H HL AAR H
Sbjct: 267 HHRPTATPARQHRHRPHVD-SGDRRRPPRERRLVLPRHGRTAHAD-HLPAARFPRQRHDV 324
Query: 46 --HRRGAGQAHRSQGRR 2
HRR G+AH+ GRR
Sbjct: 325 QPHRRLPGRAHQQCGRR 341
>UniRef50_A5P378 Cluster: Putative uncharacterized protein; n=3;
Proteobacteria|Rep: Putative uncharacterized protein -
Methylobacterium sp. 4-46
Length = 1338
Score = 34.3 bits (75), Expect = 3.3
Identities = 29/76 (38%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = -2
Query: 220 GACGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQ-GHEGVHLAAARQGH-PPH 47
G G R H H+G G+ LR R R G EG AA R+ H PP
Sbjct: 943 GRAGRDGADRRRRAERAHARHRGAGGSRLRRH---RGGGRAVGPEG---AAIRRAHRPPD 996
Query: 46 HRRGAGQAH-RSQGRR 2
HR GA + H R GRR
Sbjct: 997 HRCGAARRHERPAGRR 1012
>UniRef50_A0TIV4 Cluster: Putative uncharacterized protein; n=2;
Burkholderia cepacia complex|Rep: Putative
uncharacterized protein - Burkholderia ambifaria MC40-6
Length = 597
Score = 34.3 bits (75), Expect = 3.3
Identities = 24/64 (37%), Positives = 30/64 (46%)
Frame = -2
Query: 199 VPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAH 20
VPR+ SR L A + G + H+V+ R G EG A A G P HR G QA
Sbjct: 527 VPRQASRHLHEAA--AVPGDQVLHQVDAFAE-RHGGEGA--ADADDGRPDQHRMGVRQAE 581
Query: 19 RSQG 8
+ G
Sbjct: 582 QRLG 585
>UniRef50_Q8SZT1 Cluster: GH27708p; n=18; Eumetazoa|Rep: GH27708p -
Drosophila melanogaster (Fruit fly)
Length = 647
Score = 34.3 bits (75), Expect = 3.3
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Frame = -2
Query: 208 HHRVPRETSRLLRHCAH-QGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHP--PHHRR 38
HH+ ++ + +H H Q H H +H ++Q+ +Q H GHP PHH
Sbjct: 123 HHQQQQQHQQQQQHQQHLQQHHQAHHQHVLQQQQQQQQQHSQHQHQQQHHGHPLHPHHTH 182
Query: 37 GAGQAHRSQ 11
Q + Q
Sbjct: 183 QQQQQQQQQ 191
>UniRef50_Q0UL67 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 648
Score = 34.3 bits (75), Expect = 3.3
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -2
Query: 133 RHEVEQRVHNRQGHEGVHLAAARQ-GHPPHHRRGAGQAHRSQGRR 2
R E E+R ++ G + +R+ GH HHR G+G+ HR RR
Sbjct: 60 RREKERRKREKRRMAGRSRSGSRERGHRRHHRGGSGERHRDGRRR 104
>UniRef50_UPI0000DB6DB9 Cluster: PREDICTED: hypothetical protein;
n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
- Apis mellifera
Length = 444
Score = 33.9 bits (74), Expect = 4.3
Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = -2
Query: 208 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQG--HPPHHRRG 35
HH E H H+ H +H E + ++ GHE H +G H HH+
Sbjct: 278 HHHGHHEDHHHSHHQDHKHHHHEEHKHGHEHKEEHKHGHEHKHHHDHHEGHHHHEHHKHH 337
Query: 34 AGQAHR 17
A H+
Sbjct: 338 ASHEHK 343
>UniRef50_UPI00006A1FE8 Cluster: Coiled-coil domain-containing protein
35; n=1; Xenopus tropicalis|Rep: Coiled-coil
domain-containing protein 35 - Xenopus tropicalis
Length = 957
Score = 33.5 bits (73), Expect = 5.7
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -2
Query: 178 LLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRR 38
LLRHC + T L++ Q V +++ HE + Q + PHH R
Sbjct: 893 LLRHCGPEASSETELQNTGPQVVASQKTHEKLDNLPTDQANTPHHHR 939
>UniRef50_Q2CHG7 Cluster: Parallel beta-helix repeat protein; n=4;
cellular organisms|Rep: Parallel beta-helix repeat
protein - Oceanicola granulosus HTCC2516
Length = 3143
Score = 33.5 bits (73), Expect = 5.7
Identities = 23/68 (33%), Positives = 26/68 (38%)
Frame = -2
Query: 205 HRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQ 26
HR R R LR A G RH +R +R+ H G L A G P RRG
Sbjct: 2988 HRRRRGGDRELRRLARLLAEGRRHRHRA-RRHRDREDHRGAGLGARSGGRPDGARRGRRH 3046
Query: 25 AHRSQGRR 2
RR
Sbjct: 3047 PRAGDERR 3054
>UniRef50_A5WHY9 Cluster: TonB-dependent receptor; n=1;
Psychrobacter sp. PRwf-1|Rep: TonB-dependent receptor -
Psychrobacter sp. PRwf-1
Length = 836
Score = 33.5 bits (73), Expect = 5.7
Identities = 18/62 (29%), Positives = 21/62 (33%)
Frame = -2
Query: 205 HRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQ 26
HR+ R T L H H H H+ E+ H GHE GH H
Sbjct: 314 HRINRLTCGLDEHEHGAHEHHDHEEHDHEEHEHEEHGHEAHEHGHEEHGHQEHEHEHDEH 373
Query: 25 AH 20
H
Sbjct: 374 EH 375
>UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1;
Burkholderia phytofirmans PsJN|Rep: Putative
uncharacterized protein - Burkholderia phytofirmans PsJN
Length = 753
Score = 33.5 bits (73), Expect = 5.7
Identities = 26/70 (37%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = -2
Query: 208 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAAR-QGHPPHHRRGA 32
HHR R R H H+ H H RH ++R+H+R H G H R +GH H RR
Sbjct: 526 HHRDHRHHDR---H--HRDRH-RHDRHRHDRRLHDRHRH-GHHRHGHRLRGHRHHDRRPR 578
Query: 31 GQAHRSQGRR 2
G RR
Sbjct: 579 GHGLHRHDRR 588
>UniRef50_Q5QMN1 Cluster: Putative uncharacterized protein
P0419B01.9; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0419B01.9 - Oryza sativa subsp. japonica (Rice)
Length = 123
Score = 33.5 bits (73), Expect = 5.7
Identities = 29/67 (43%), Positives = 30/67 (44%), Gaps = 14/67 (20%)
Frame = +3
Query: 60 PC-RAAARCTPSC---PCRL*TR-------CSTSWRRCV-PWSP*CAQ--CRRSRDVSRG 197
PC RAAA C P C PCR R C + CV P SP CA CRR R R
Sbjct: 41 PCVRAAAPCVPPCTSRPCRRPRRHLRPPSACVRAAALCVPPSSPPCASRPCRRPRHRLRP 100
Query: 198 TRWCPHA 218
C HA
Sbjct: 101 PAACVHA 107
>UniRef50_Q0DW21 Cluster: Os03g0101400 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os03g0101400 protein -
Oryza sativa subsp. japonica (Rice)
Length = 361
Score = 33.5 bits (73), Expect = 5.7
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -2
Query: 169 HCAHQGLHGTHLRH-EVEQRVHNRQGHEGVHLAAARQGHPPHHRR 38
H HQ LH +H + Q VH+R H R+ HP HHRR
Sbjct: 128 HLRHQHLHPSHQQQPPPPQPVHHRHRHH----VRRRRAHPRHHRR 168
>UniRef50_Q9UAY0 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 471
Score = 33.5 bits (73), Expect = 5.7
Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = -2
Query: 169 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGH--PPHHRRGAGQAHRSQG 8
HC G HG H R H G G R GH PPHH G++ G
Sbjct: 361 HCP--GRHGRHGSRSHSPRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGRSPSRHG 414
>UniRef50_A7TPB7 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 228
Score = 33.5 bits (73), Expect = 5.7
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = -2
Query: 208 HHRV-PRETSRLLRHCAHQGLHGTH-LRHEVEQRVH-NRQGHEGVHLAAARQGHPPHHRR 38
HH + P + + L H HQ LH TH L H + Q + Q H +H PHH R
Sbjct: 95 HHTLQPPQVTVQLHHHIHQHLHHTHQLHHHIHQLLQVIVQHHHPIHQHHHHTHQHPHHIR 154
>UniRef50_UPI0000D5573E Cluster: PREDICTED: similar to
Tyrosine-protein phosphatase non-receptor type 13
(Protein-tyrosine phosphatase 1E) (PTP-E1) (hPTPE1)
(PTP-BAS) (Protein-tyrosine phosphatase PTPL1)
(Fas-associated protein-tyrosine phosphatase 1) (FAP-1);
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
Tyrosine-protein phosphatase non-receptor type 13
(Protein-tyrosine phosphatase 1E) (PTP-E1) (hPTPE1)
(PTP-BAS) (Protein-tyrosine phosphatase PTPL1)
(Fas-associated protein-tyrosine phosphatase 1) (FAP-1)
- Tribolium castaneum
Length = 768
Score = 33.1 bits (72), Expect = 7.5
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = -3
Query: 372 LVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMI 238
+ DGR ++ D +IKVND ++TT+I+D ++ G +C++
Sbjct: 708 VAARDGR-LKPGDRVIKVNDESVEHLSTTEIIDLLRIVRGPVCIV 751
>UniRef50_Q93VS6 Cluster: At1g67870/T23K23_28; n=2; Arabidopsis
thaliana|Rep: At1g67870/T23K23_28 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 279
Score = 33.1 bits (72), Expect = 7.5
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -2
Query: 160 HQGLHGTHLR--HEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHR 17
HQG+HG + H ++ + + H+G+H + GH H+ G G H+
Sbjct: 154 HQGMHGMQHQGGHGMQHQGGHGMQHQGMHGMQHQGGHGMEHQGGHGMQHQ 203
>UniRef50_Q0J1G4 Cluster: Os09g0441900 protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Os09g0441900 protein -
Oryza sativa subsp. japonica (Rice)
Length = 444
Score = 33.1 bits (72), Expect = 7.5
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = +3
Query: 21 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRCVPWSP*CAQCRRS 179
C+CP C A C+ C C T+C + C P C +C+ S
Sbjct: 337 CSCPRCSSCFNIFKCSCAGCCSSLCKCPCTTQCFSCQSSCCKRQPSCCKCQSS 389
>UniRef50_Q01J77 Cluster: OSIGBa0152K17.10 protein; n=5; Oryza
sativa|Rep: OSIGBa0152K17.10 protein - Oryza sativa
(Rice)
Length = 444
Score = 33.1 bits (72), Expect = 7.5
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = -2
Query: 187 TSRL--LR-HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAG 29
TSRL LR H H HG + RH++ +R R H L A G P + AG
Sbjct: 25 TSRLKGLRVHLTHVDAHGNYSRHQLLRRAARRSHHRMSRLVARATGVPMTSSKAAG 80
>UniRef50_Q7REV3 Cluster: Drosophila melanogaster CG8797 gene
product-related; n=8; Eukaryota|Rep: Drosophila
melanogaster CG8797 gene product-related - Plasmodium
yoelii yoelii
Length = 2198
Score = 33.1 bits (72), Expect = 7.5
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = -2
Query: 157 QGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRR 2
QG G H++H+ E ++QGH +QG ++G GQ + QG++
Sbjct: 1207 QGQQGAHVQHQQEAHRQHQQGHGQQQGQGQQQGQ--GQQQGQGQGQQGQGQQ 1256
>UniRef50_Q4XGP3 Cluster: Pc-fam-3 protein putative; n=1; Plasmodium
chabaudi|Rep: Pc-fam-3 protein putative - Plasmodium
chabaudi
Length = 160
Score = 33.1 bits (72), Expect = 7.5
Identities = 17/52 (32%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Frame = -2
Query: 169 HCAHQGLHGTHLRHEVEQRVHNRQGHE--GVHLAAARQGHPPHHRRGAGQAH 20
H H G H HL H + H+ + HE G H H HH G H
Sbjct: 97 HHEHHGHHEHHLHHAHGEHHHHGEHHEHHGHHEHHLHHAHGEHHHHGEHHHH 148
>UniRef50_P04929 Cluster: Histidine-rich glycoprotein precursor;
n=2; Plasmodium lophurae|Rep: Histidine-rich
glycoprotein precursor - Plasmodium lophurae
Length = 351
Score = 33.1 bits (72), Expect = 7.5
Identities = 19/63 (30%), Positives = 20/63 (31%)
Frame = -2
Query: 208 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAG 29
HH P E H H H H E + H H H HPPHH G
Sbjct: 62 HHHHPEE-----HHEPHHEEHHHHHPEEHHEPHHEEHHHHHPHPHHHHHHHPPHHHHHLG 116
Query: 28 QAH 20
H
Sbjct: 117 HHH 119
>UniRef50_Q4TFG9 Cluster: Chromosome undetermined SCAF4487, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF4487,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 258
Score = 32.7 bits (71), Expect = 9.9
Identities = 24/59 (40%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Frame = -2
Query: 172 RHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGH--PPHHRRGAGQAHRSQGRR 2
R H G HL E R G G A RQ PPH RR AG+ RSQG R
Sbjct: 152 RRLEHGGGPRLHLE-PAESEAAARTGRGGDRRARGRQRAQLPPHTRRPAGRYRRSQGWR 209
>UniRef50_Q89Y09 Cluster: Blr0146 protein; n=1; Bradyrhizobium
japonicum|Rep: Blr0146 protein - Bradyrhizobium
japonicum
Length = 530
Score = 32.7 bits (71), Expect = 9.9
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = -2
Query: 157 QGLHGTHLRHEVEQRVHNRQGH----EGVHLAAARQGHPPHHRRGAGQAHRSQGR 5
+G+HG H + RV +RQG +G+ AA RQ P H RG + R + +
Sbjct: 371 EGVHGRHHHQRLPGRVRHRQGRPVAVQGL-CAAFRQRRLPLHLRGTAEVDRERAQ 424
>UniRef50_A0VKI5 Cluster: ABC-type Fe3+ transport system periplasmic
component-like; n=1; Delftia acidovorans SPH-1|Rep:
ABC-type Fe3+ transport system periplasmic
component-like - Delftia acidovorans SPH-1
Length = 674
Score = 32.7 bits (71), Expect = 9.9
Identities = 24/57 (42%), Positives = 25/57 (43%)
Frame = +3
Query: 3 RRPWLRCACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRCVPWSP*CAQCR 173
RR W PAP R C RAAARC C R RC S R +P CA R
Sbjct: 12 RRKWAMWPMPAPAR----C-ARAAARCWAWCCPRSPIRCLPSACRALPRRRRCAAMR 63
>UniRef50_Q54XL5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 196
Score = 32.7 bits (71), Expect = 9.9
Identities = 17/56 (30%), Positives = 22/56 (39%)
Frame = -2
Query: 172 RHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGR 5
+H +H HG H E + H+ GH H GH H G H +GR
Sbjct: 76 KHESHH-FHGLHFHPEHQFGGHHFGGHHHHHGGHHHHGHHHGHHHGGHHGHHFEGR 130
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 830,344,378
Number of Sequences: 1657284
Number of extensions: 18425492
Number of successful extensions: 62615
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 58027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62319
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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