BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14e15
(742 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M65062-1|AAD04730.1| 272|Homo sapiens insulin-like growth facto... 31 4.3
M62782-1|AAA53505.1| 272|Homo sapiens insulin-like growth facto... 31 4.3
L27559-1|AAA72051.1| 272|Homo sapiens IGFBP5 protein. 31 4.3
CR456809-1|CAG33090.1| 272|Homo sapiens IGFBP5 protein. 31 4.3
BT019707-1|AAV38513.1| 272|Homo sapiens insulin-like growth fac... 31 4.3
BT019706-1|AAV38512.1| 272|Homo sapiens insulin-like growth fac... 31 4.3
BC011453-1|AAH11453.1| 272|Homo sapiens insulin-like growth fac... 31 4.3
AY534685-1|AAS16353.1| 272|Homo sapiens insulin-like growth fac... 31 4.3
AF055033-1|AAC09368.1| 272|Homo sapiens insulin-like growth fac... 31 4.3
AC007563-1|AAY14662.1| 272|Homo sapiens unknown protein. 31 4.3
>M65062-1|AAD04730.1| 272|Homo sapiens insulin-like growth factor
binding protein 5 protein.
Length = 272
Score = 31.1 bits (67), Expect = 4.3
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = -3
Query: 362 RHVPRSLYERQRFPHLPH*ANR--NCTRQGKIRDRHYVCRFVPTGNRRCGRCGCVEQYAH 189
RH+ SL E + P + A NC R+G + + C+ P+ R+ G C CV++Y
Sbjct: 194 RHMEASLQELKASPRMVPRAVYLPNCDRKGFYKRKQ--CK--PSRGRKRGICWCVDKYG- 248
Query: 188 EKFNGLRYHD 159
K G+ Y D
Sbjct: 249 MKLPGMEYVD 258
>M62782-1|AAA53505.1| 272|Homo sapiens insulin-like growth factor
binding protein 5 protein.
Length = 272
Score = 31.1 bits (67), Expect = 4.3
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = -3
Query: 362 RHVPRSLYERQRFPHLPH*ANR--NCTRQGKIRDRHYVCRFVPTGNRRCGRCGCVEQYAH 189
RH+ SL E + P + A NC R+G + + C+ P+ R+ G C CV++Y
Sbjct: 194 RHMEASLQELKASPRMVPRAVYLPNCDRKGFYKRKQ--CK--PSRGRKRGICWCVDKYG- 248
Query: 188 EKFNGLRYHD 159
K G+ Y D
Sbjct: 249 MKLPGMEYVD 258
>L27559-1|AAA72051.1| 272|Homo sapiens IGFBP5 protein.
Length = 272
Score = 31.1 bits (67), Expect = 4.3
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = -3
Query: 362 RHVPRSLYERQRFPHLPH*ANR--NCTRQGKIRDRHYVCRFVPTGNRRCGRCGCVEQYAH 189
RH+ SL E + P + A NC R+G + + C+ P+ R+ G C CV++Y
Sbjct: 194 RHMEASLQELKASPRMVPRAVYLPNCDRKGFYKRKQ--CK--PSRGRKRGICWCVDKYG- 248
Query: 188 EKFNGLRYHD 159
K G+ Y D
Sbjct: 249 MKLPGMEYVD 258
>CR456809-1|CAG33090.1| 272|Homo sapiens IGFBP5 protein.
Length = 272
Score = 31.1 bits (67), Expect = 4.3
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = -3
Query: 362 RHVPRSLYERQRFPHLPH*ANR--NCTRQGKIRDRHYVCRFVPTGNRRCGRCGCVEQYAH 189
RH+ SL E + P + A NC R+G + + C+ P+ R+ G C CV++Y
Sbjct: 194 RHMEASLQELKASPRMVPRAVYLPNCDRKGFYKRKQ--CK--PSRGRKRGICWCVDKYG- 248
Query: 188 EKFNGLRYHD 159
K G+ Y D
Sbjct: 249 MKLPGMEYVD 258
>BT019707-1|AAV38513.1| 272|Homo sapiens insulin-like growth factor
binding protein 5 protein.
Length = 272
Score = 31.1 bits (67), Expect = 4.3
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = -3
Query: 362 RHVPRSLYERQRFPHLPH*ANR--NCTRQGKIRDRHYVCRFVPTGNRRCGRCGCVEQYAH 189
RH+ SL E + P + A NC R+G + + C+ P+ R+ G C CV++Y
Sbjct: 194 RHMEASLQELKASPRMVPRAVYLPNCDRKGFYKRKQ--CK--PSRGRKRGICWCVDKYG- 248
Query: 188 EKFNGLRYHD 159
K G+ Y D
Sbjct: 249 MKLPGMEYVD 258
>BT019706-1|AAV38512.1| 272|Homo sapiens insulin-like growth factor
binding protein 5 protein.
Length = 272
Score = 31.1 bits (67), Expect = 4.3
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = -3
Query: 362 RHVPRSLYERQRFPHLPH*ANR--NCTRQGKIRDRHYVCRFVPTGNRRCGRCGCVEQYAH 189
RH+ SL E + P + A NC R+G + + C+ P+ R+ G C CV++Y
Sbjct: 194 RHMEASLQELKASPRMVPRAVYLPNCDRKGFYKRKQ--CK--PSRGRKRGICWCVDKYG- 248
Query: 188 EKFNGLRYHD 159
K G+ Y D
Sbjct: 249 MKLPGMEYVD 258
>BC011453-1|AAH11453.1| 272|Homo sapiens insulin-like growth factor
binding protein 5 protein.
Length = 272
Score = 31.1 bits (67), Expect = 4.3
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = -3
Query: 362 RHVPRSLYERQRFPHLPH*ANR--NCTRQGKIRDRHYVCRFVPTGNRRCGRCGCVEQYAH 189
RH+ SL E + P + A NC R+G + + C+ P+ R+ G C CV++Y
Sbjct: 194 RHMEASLQELKASPRMVPRAVYLPNCDRKGFYKRKQ--CK--PSRGRKRGICWCVDKYG- 248
Query: 188 EKFNGLRYHD 159
K G+ Y D
Sbjct: 249 MKLPGMEYVD 258
>AY534685-1|AAS16353.1| 272|Homo sapiens insulin-like growth factor
binding protein 5 protein.
Length = 272
Score = 31.1 bits (67), Expect = 4.3
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = -3
Query: 362 RHVPRSLYERQRFPHLPH*ANR--NCTRQGKIRDRHYVCRFVPTGNRRCGRCGCVEQYAH 189
RH+ SL E + P + A NC R+G + + C+ P+ R+ G C CV++Y
Sbjct: 194 RHMEASLQELKASPRMVPRAVYLPNCDRKGFYKRKQ--CK--PSRGRKRGICWCVDKYG- 248
Query: 188 EKFNGLRYHD 159
K G+ Y D
Sbjct: 249 MKLPGMEYVD 258
>AF055033-1|AAC09368.1| 272|Homo sapiens insulin-like growth factor
binding protein 5 protein.
Length = 272
Score = 31.1 bits (67), Expect = 4.3
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = -3
Query: 362 RHVPRSLYERQRFPHLPH*ANR--NCTRQGKIRDRHYVCRFVPTGNRRCGRCGCVEQYAH 189
RH+ SL E + P + A NC R+G + + C+ P+ R+ G C CV++Y
Sbjct: 194 RHMEASLQELKASPRMVPRAVYLPNCDRKGFYKRKQ--CK--PSRGRKRGICWCVDKYG- 248
Query: 188 EKFNGLRYHD 159
K G+ Y D
Sbjct: 249 MKLPGMEYVD 258
>AC007563-1|AAY14662.1| 272|Homo sapiens unknown protein.
Length = 272
Score = 31.1 bits (67), Expect = 4.3
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = -3
Query: 362 RHVPRSLYERQRFPHLPH*ANR--NCTRQGKIRDRHYVCRFVPTGNRRCGRCGCVEQYAH 189
RH+ SL E + P + A NC R+G + + C+ P+ R+ G C CV++Y
Sbjct: 194 RHMEASLQELKASPRMVPRAVYLPNCDRKGFYKRKQ--CK--PSRGRKRGICWCVDKYG- 248
Query: 188 EKFNGLRYHD 159
K G+ Y D
Sbjct: 249 MKLPGMEYVD 258
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,431,430
Number of Sequences: 237096
Number of extensions: 2443433
Number of successful extensions: 5257
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5211
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -