Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc14e14
         (406 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    27   0.26 
AY745207-1|AAU93474.1|  103|Anopheles gambiae cytochrome P450 pr...    23   5.6  
AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9...    22   9.8  

>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 27.1 bits (57), Expect = 0.26
 Identities = 21/103 (20%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
 Frame = -3

Query: 329 RAKTCLDIALDNLKLLRRKTNIKEVAVMLNKKTTECXQLKQKXDKKIAQRILIKIYTIK* 150
           R+++  D+AL+ +++ R    +    V L+             D K+A     + Y ++ 
Sbjct: 10  RSRSAQDLALNTMRVERADVCLM---VELHSVPRNNGNWVADRDGKVAIIASSETYPVQQ 66

Query: 149 X-NHNEFNIXXAKINDIIF*TCFTSXXVRVKQVXDMMSSSQII 24
             +  +  I  A+IND++F  C+ S    V +  ++M    ++
Sbjct: 67  VVSVTQSGIAAARINDVLFICCYVSPSAGVSEFEEVMQRIDVL 109


>AY745207-1|AAU93474.1|  103|Anopheles gambiae cytochrome P450
           protein.
          Length = 103

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 371 GDLAHTFLKLGYLFRAKTCLDIALDNLKL 285
           GD  H F  L Y + A+ CL     +L++
Sbjct: 62  GDQLHPFASLPYGYGARMCLGRRFADLEM 90


>AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9
           protein.
          Length = 685

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +2

Query: 287 VSNYLKRYPDKSWP*INNPILKKCXPNRHAS 379
           + N  +  P+  +P + N  L +  P RHA+
Sbjct: 260 LKNLREPIPEAYFPKLLNSALNRTYPGRHAN 290


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 326,097
Number of Sequences: 2352
Number of extensions: 4264
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32494788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)