Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14e10
(369 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0E8X7 Cluster: CG30415-PA, isoform A; n=7; Endopterygo... 108 4e-23
UniRef50_UPI0000515741 Cluster: PREDICTED: similar to CG30415-PA... 85 3e-16
UniRef50_Q09JI6 Cluster: Conserved arthropod protein; n=2; Ixodo... 71 5e-12
UniRef50_UPI0000E4A3F9 Cluster: PREDICTED: similar to ankyrin 2,... 34 0.95
UniRef50_A7RI12 Cluster: Predicted protein; n=2; Nematostella ve... 32 2.9
UniRef50_A3FQD7 Cluster: Putative uncharacterized protein; n=2; ... 32 3.8
UniRef50_A7PKL2 Cluster: Chromosome chr7 scaffold_20, whole geno... 31 5.1
UniRef50_UPI0000584AAA Cluster: PREDICTED: similar to MGC69335 p... 31 6.7
UniRef50_Q17BI7 Cluster: Putative uncharacterized protein; n=1; ... 31 6.7
UniRef50_A4LX82 Cluster: Ig family protein precursor; n=2; cellu... 31 8.9
UniRef50_A7RQC5 Cluster: Predicted protein; n=1; Nematostella ve... 31 8.9
UniRef50_Q5A9W9 Cluster: Putative uncharacterized protein; n=1; ... 31 8.9
>UniRef50_Q0E8X7 Cluster: CG30415-PA, isoform A; n=7;
Endopterygota|Rep: CG30415-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 82
Score = 108 bits (259), Expect = 4e-23
Identities = 44/71 (61%), Positives = 55/71 (77%)
Frame = -1
Query: 252 GRPMKFPYTFSAKVAQFPYKFYLQNLWLWRYWAAAIVISSPLFYKIHKMSNSPENVSKWA 73
GRPM++PYTFSAK+AQFP K Y++N W+WRY+ A V P+FYKI K++NSPEN WA
Sbjct: 12 GRPMRYPYTFSAKIAQFPIKHYIKNQWIWRYYFIAAVACVPVFYKISKLANSPENKKAWA 71
Query: 72 EIRRKEAAEHH 40
E + KE AEHH
Sbjct: 72 ESQAKEHAEHH 82
>UniRef50_UPI0000515741 Cluster: PREDICTED: similar to CG30415-PA,
isoform A; n=2; Apocrita|Rep: PREDICTED: similar to
CG30415-PA, isoform A - Apis mellifera
Length = 78
Score = 85.4 bits (202), Expect = 3e-16
Identities = 36/75 (48%), Positives = 54/75 (72%), Gaps = 4/75 (5%)
Frame = -1
Query: 252 GRPMKFPYTFSAKVAQFPYKFYL---QNLWLWRYWAAAIVISSPLFYKIHKMSNSPENVS 82
GRPMKFPYT +AK+ +FP+ Y + W++RYWA +I+I +PL+YK ++S++PENV
Sbjct: 3 GRPMKFPYTIAAKITRFPFHHYFVKSETGWVFRYWAISILICAPLWYKFQQLSHNPENVK 62
Query: 81 KWAEIRRKE-AAEHH 40
KW EI + + + E H
Sbjct: 63 KWDEIHKHQFSGEMH 77
>UniRef50_Q09JI6 Cluster: Conserved arthropod protein; n=2;
Ixodoidea|Rep: Conserved arthropod protein - Argas
monolakensis
Length = 102
Score = 71.3 bits (167), Expect = 5e-12
Identities = 36/82 (43%), Positives = 53/82 (64%), Gaps = 5/82 (6%)
Frame = -1
Query: 270 TMSDAPGRPMKFPYTFSAKVAQFPYKFYLQNLWLWRYWAAAIVISSPLFY--KIHKMSNS 97
T S + R MK+PYT++AKVA FP++F +N+WL RY AI+++ +FY +H+ NS
Sbjct: 21 TASSSTSRRMKYPYTWTAKVALFPHRFMFENVWLIRYSIPAIILTF-IFYVVPVHRAVNS 79
Query: 96 PENVSKWAEIRRKEA---AEHH 40
P ++ E RK+A AEHH
Sbjct: 80 PSAIAAHEEFMRKQAEAEAEHH 101
>UniRef50_UPI0000E4A3F9 Cluster: PREDICTED: similar to ankyrin
2,3/unc44; n=3; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to ankyrin 2,3/unc44 -
Strongylocentrotus purpuratus
Length = 1763
Score = 33.9 bits (74), Expect = 0.95
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -1
Query: 270 TMSDAPGRPMKFPYTFSAKVAQFPYKFYLQNLWLWRYWAAAIVIS 136
T D P+K+ + A + F Y FY + +W W + +AA V S
Sbjct: 1382 TYLDRNDHPLKYAVS-PASIDSFKYSFYPRTIWTWNHLSAAAVTS 1425
>UniRef50_A7RI12 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 1740
Score = 32.3 bits (70), Expect = 2.9
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -1
Query: 318 SNY*VFSIFSSFTYALTMSDAPGRP-MKFPYTFSAKVAQFPYKFYLQNLWL 169
+N+ FS F+ YA+ M+ + + FP+ + + Q PY Y+Q+ ++
Sbjct: 182 TNFYTFSGFAILQYAIDMAIIQAKASLPFPFAYPMNIKQLPYPGYVQDFFV 232
>UniRef50_A3FQD7 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 296
Score = 31.9 bits (69), Expect = 3.8
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = -1
Query: 363 FRFRSD-FIEKTEKVISNY*VFSIFSSFTYALTMSDAPGRPMKFPYTFSAKVAQFPYKFY 187
FR ++D + K +K++++ V S+F+S S PG+ + +P TF ++ +P
Sbjct: 82 FRRKTDLWSRKNDKILTH--VVSLFTSSFIFFWDSFFPGKKLLYPPTFDGRIIMYPTDED 139
Query: 186 LQNLWLWR 163
++ WR
Sbjct: 140 IRTYLSWR 147
>UniRef50_A7PKL2 Cluster: Chromosome chr7 scaffold_20, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr7 scaffold_20, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 388
Score = 31.5 bits (68), Expect = 5.1
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 254 GASDIVRA*VNEEKIENT**FEITFSVFSMKSD 352
GASDI+ VN+EK+EN F + +V ++K D
Sbjct: 230 GASDIIAVDVNDEKLENAKVFGASHTVNALKED 262
>UniRef50_UPI0000584AAA Cluster: PREDICTED: similar to MGC69335
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to MGC69335 protein -
Strongylocentrotus purpuratus
Length = 286
Score = 31.1 bits (67), Expect = 6.7
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 210 AQFPYKFYLQNLWLWRYWAAAIVIS 136
+ F Y FY + +W W + +AA VIS
Sbjct: 236 SNFKYSFYPRTIWTWNHLSAAAVIS 260
>UniRef50_Q17BI7 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 642
Score = 31.1 bits (67), Expect = 6.7
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -2
Query: 167 GVTGLPPS*FPHHSST-KFTKCQTPLKM*ASGLKSEGKKLPNTTKCSSSNHS 15
GVTG PS H ST + + P + S SEGK +TT S S HS
Sbjct: 355 GVTGTTPSGSQSHKSTVSSSMSELPGSIGRSTTPSEGKTGASTTSPSKSGHS 406
>UniRef50_A4LX82 Cluster: Ig family protein precursor; n=2; cellular
organisms|Rep: Ig family protein precursor - Geobacter
bemidjiensis Bem
Length = 1544
Score = 30.7 bits (66), Expect = 8.9
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = -1
Query: 297 IFSSFTYALTMSDAPGRP-MKFPYTFSAKVAQFPYKF-YLQNLWLWRYWAAAIVISSPL 127
+ F + M APGR +KF YT+S VA F Y+ L+ L W + PL
Sbjct: 1459 VLRHFRDNVLMKSAPGRAFVKFYYTYSPPVADFIYEHDLLRLLTRWALTPLIFAVKYPL 1517
>UniRef50_A7RQC5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 389
Score = 30.7 bits (66), Expect = 8.9
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2
Query: 359 DFDQTSLRKLKRLSQIIKCFQSFLHLL 279
DFD + LR+L + I FQS LHLL
Sbjct: 256 DFDWSPLRELSSIDDITNTFQSTLHLL 282
>UniRef50_Q5A9W9 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 884
Score = 30.7 bits (66), Expect = 8.9
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1
Query: 291 SSFTYALTMSDAPGRPMKFPYTFSAKVAQFPYKFYLQN 178
SS T S PG+ KF +T ++P+KF LQN
Sbjct: 692 SSITIHKKHSIMPGKTAKFNFTLINTHTKYPFKFILQN 729
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 380,886,832
Number of Sequences: 1657284
Number of extensions: 7643129
Number of successful extensions: 18840
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18830
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 13647406432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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