Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc14e09
         (378 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    23   1.0  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          20   7.2  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    20   9.5  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    20   9.5  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    20   9.5  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    20   9.5  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    20   9.5  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    20   9.5  

>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +3

Query: 21  RVTRVCDGECAHSVVFSACCS*FNVVPAVVVNT 119
           R+ R+C+GE A +    +C S   V P+V+  T
Sbjct: 45  RLQRICNGEVAVNKCEGSCKS--QVQPSVITPT 75


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 5/9 (55%), Positives = 9/9 (100%)
 Frame = +1

Query: 340 MLMNPHQEH 366
           +++NPHQ+H
Sbjct: 617 LVINPHQQH 625


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 70  ENTTECAHSPSQTLVTRTL 14
           ENTT C    +   VT T+
Sbjct: 122 ENTTNCPEQKNTVTVTFTV 140


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 140 YALLAKTGVHH 108
           Y L+AKT +HH
Sbjct: 257 YILIAKTLMHH 267


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 263 SPKQGGS*LTRWSFSVSLLQPF 328
           S KQG + +TR S   SL  PF
Sbjct: 532 SLKQGTNTITRHSTESSLTIPF 553


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 300 LFLFLCCNHFGSVN 341
           LF+F  C+H  S+N
Sbjct: 296 LFVFCDCSHQASLN 309


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 300 LFLFLCCNHFGSVN 341
           LF+F  C+H  S+N
Sbjct: 296 LFVFCDCSHQASLN 309


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 300 LFLFLCCNHFGSVN 341
           LF+F  C+H  S+N
Sbjct: 296 LFVFCDCSHQASLN 309


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,618
Number of Sequences: 336
Number of extensions: 1842
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7803226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)