Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14e08
(672 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O10348 Cluster: Uncharacterized 44.3 kDa protein; n=14;... 216 5e-55
UniRef50_Q9YMM0 Cluster: LdOrf-107 peptide; n=14; Nucleopolyhedr... 153 5e-36
UniRef50_Q0IL08 Cluster: ORF111; n=2; Leucania separata nuclear ... 136 3e-31
UniRef50_Q287K6 Cluster: ORF-66; n=4; Nucleopolyhedrovirus|Rep: ... 134 1e-30
UniRef50_Q9PYZ0 Cluster: ORF53; n=1; Xestia c-nigrum granuloviru... 93 4e-18
UniRef50_Q8JS09 Cluster: Putative uncharacterized protein PhopGV... 93 7e-18
UniRef50_Q7T9W9 Cluster: ORF_46; n=5; Granulovirus|Rep: ORF_46 -... 90 5e-17
UniRef50_A5IZP8 Cluster: Putative uncharacterized protein orf46;... 87 5e-16
UniRef50_Q9DVY9 Cluster: PxORF43 peptide; n=2; Granulovirus|Rep:... 80 6e-14
UniRef50_P41661 Cluster: Uncharacterized 11.8 kDa protein in HE6... 78 2e-13
UniRef50_O10347 Cluster: Uncharacterized 11.7 kDa protein; n=3; ... 50 5e-05
UniRef50_A3HA67 Cluster: Putative uncharacterized protein precur... 40 0.072
UniRef50_A4AGL0 Cluster: Ribonuclease G; n=2; Actinobacteria (cl... 36 1.2
UniRef50_Q126X5 Cluster: Signal transduction histidine kinase; n... 35 2.1
UniRef50_A3H9B7 Cluster: Bacterio-opsin activator, HTH; n=1; Cal... 35 2.1
UniRef50_Q8IHR6 Cluster: Coat protein, gamma subunit, putative; ... 34 2.7
UniRef50_A0EBL3 Cluster: Chromosome undetermined scaffold_88, wh... 34 3.6
UniRef50_Q9YW59 Cluster: Putative uncharacterized protein MSV032... 33 4.8
UniRef50_Q89J50 Cluster: Blr5434 protein; n=1; Bradyrhizobium ja... 33 4.8
UniRef50_Q1D9P1 Cluster: Putative uncharacterized protein; n=1; ... 33 4.8
UniRef50_UPI000049833D Cluster: hypothetical protein 55.t00029; ... 33 6.3
UniRef50_Q7YYX8 Cluster: Putative uncharacterized protein; n=3; ... 33 6.3
UniRef50_A4BXH2 Cluster: Leucyl-tRNA synthetase; n=2; Bacteria|R... 33 8.3
UniRef50_Q76DY2 Cluster: AG-motif binding protein-2; n=2; core e... 33 8.3
UniRef50_A0DQG6 Cluster: Chromosome undetermined scaffold_6, who... 33 8.3
UniRef50_A0DDZ4 Cluster: Chromosome undetermined scaffold_47, wh... 33 8.3
>UniRef50_O10348 Cluster: Uncharacterized 44.3 kDa protein; n=14;
Nucleopolyhedrovirus|Rep: Uncharacterized 44.3 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 390
Score = 216 bits (527), Expect = 5e-55
Identities = 96/177 (54%), Positives = 138/177 (77%)
Frame = -2
Query: 671 PARYVINLPHEEIDNLYNKLNWERTRRLMKGDVPSNCXTVNRSSLKYIKQAQSLLGIPDY 492
PARYVINLPHEE+D+LYNKLNW RTRRL++GD+PSNC TVNR+SL+Y+K AQ+LL I
Sbjct: 218 PARYVINLPHEEVDSLYNKLNWARTRRLLRGDIPSNCATVNRASLQYVKDAQTLLHIAKC 277
Query: 491 SQTVVDFVKMFQKIIFPYQLVPNVIIKLNNFDQIMSVAPNKAESYKKIRLFCKNDSIAIS 312
SQT+V+FV++FQ++IFPYQ+VP VI+KLN+ ++ + ++R+FCKNDS+AI+
Sbjct: 278 SQTIVEFVRIFQQLIFPYQIVPIVIVKLNS----LNAKSGQTAHENRVRVFCKNDSVAIT 333
Query: 311 SNGIVPINMPDFSPSNNAFDYSDYVNRTNINFVTQRVLIDGGFSSGVTVTPIKYNYY 141
+ G VP+NMPD +P+ + FD +++ + ++ V RV +DG F+SGV V ++YNY+
Sbjct: 334 TAGCVPVNMPDAAPA-STFDNTEFDDVAHLKQVANRVAVDGVFTSGVVVHAVRYNYF 389
>UniRef50_Q9YMM0 Cluster: LdOrf-107 peptide; n=14;
Nucleopolyhedrovirus|Rep: LdOrf-107 peptide - Lymantria
dispar multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 366
Score = 153 bits (370), Expect = 5e-36
Identities = 79/177 (44%), Positives = 108/177 (61%)
Frame = -2
Query: 671 PARYVINLPHEEIDNLYNKLNWERTRRLMKGDVPSNCXTVNRSSLKYIKQAQSLLGIPDY 492
PARY I LP E+D+++NKL WER RRLMKGD C VNR +L+YI+ A +LG+
Sbjct: 203 PARYAIYLPDREVDSIFNKLTWERVRRLMKGDYKRVCVNVNRHALRYIQLAMDMLGVEAS 262
Query: 491 SQTVVDFVKMFQKIIFPYQLVPNVIIKLNNFDQIMSVAPNKAESYKKIRLFCKNDSIAIS 312
SQ VV+ V+ F+ +I P+Q+VP +I+KLN E + +RL+CKNDS AI
Sbjct: 263 SQVVVNLVRAFEMLILPFQVVPEIIVKLNT-----------VERQRSVRLYCKNDSFAIG 311
Query: 311 SNGIVPINMPDFSPSNNAFDYSDYVNRTNINFVTQRVLIDGGFSSGVTVTPIKYNYY 141
+G VP N+PD +P AFDY+D VN + F + I G +TV +YNY+
Sbjct: 312 LHGPVPNNLPDDNPI--AFDYAD-VNDSRHLFEVRESFIKRGHVDELTVVATRYNYF 365
>UniRef50_Q0IL08 Cluster: ORF111; n=2; Leucania separata nuclear
polyhedrosis virus|Rep: ORF111 - Leucania separata
nuclear polyhedrosis virus (LsNPV)
Length = 364
Score = 136 bits (330), Expect = 3e-31
Identities = 73/178 (41%), Positives = 109/178 (61%), Gaps = 2/178 (1%)
Frame = -2
Query: 668 ARYVINLPHEEIDNLYNKLNWERTRRLMKGD--VPSNCXTVNRSSLKYIKQAQSLLGIPD 495
ARY IN+ EID++Y+KL WER RRLMKG P +C V+R SL YI A+ LLGIPD
Sbjct: 200 ARYAINMADAEIDDIYSKLRWERARRLMKGGPTTPKDCVMVDRESLSYINIAKMLLGIPD 259
Query: 494 YSQTVVDFVKMFQKIIFPYQLVPNVIIKLNNFDQIMSVAPNKAESYKKIRLFCKNDSIAI 315
Y++T +DFV+ F+ +I P +++P V +KLN+ + ++Y +R++C NDS AI
Sbjct: 260 YARTTLDFVEKFEVLIVPARIIPEVFVKLNSIE---------TKTY--MRIYCVNDSYAI 308
Query: 314 SSNGIVPINMPDFSPSNNAFDYSDYVNRTNINFVTQRVLIDGGFSSGVTVTPIKYNYY 141
+ +G+VP N + +P FDYSD V+ N ++ L + + + P YNY+
Sbjct: 309 TEHGLVPNNSANINPIK--FDYSD-VSNPNYLISLRKNLFERHDIYDIRIRPAYYNYF 363
>UniRef50_Q287K6 Cluster: ORF-66; n=4; Nucleopolyhedrovirus|Rep:
ORF-66 - Agrotis segetum nuclear polyhedrosis virus
(AsNPV)
Length = 356
Score = 134 bits (325), Expect = 1e-30
Identities = 71/177 (40%), Positives = 110/177 (62%)
Frame = -2
Query: 671 PARYVINLPHEEIDNLYNKLNWERTRRLMKGDVPSNCXTVNRSSLKYIKQAQSLLGIPDY 492
PAR+ + ++ ++Y +L E RRL+KGD +C +N +L+YIK+AQ LL +PD
Sbjct: 193 PARFAYEMSDADVQDIYVELKNELVRRLIKGDTSQHCPYLNIPNLQYIKRAQQLLLVPDS 252
Query: 491 SQTVVDFVKMFQKIIFPYQLVPNVIIKLNNFDQIMSVAPNKAESYKKIRLFCKNDSIAIS 312
SQT+V+F+ MFQ ++ PY +VP++IIKLN+ D+ +K+RL+CKNDS AI+
Sbjct: 253 SQTIVNFINMFQVLVLPYMIVPDIIIKLNSLDR-----------ERKVRLYCKNDSYAIT 301
Query: 311 SNGIVPINMPDFSPSNNAFDYSDYVNRTNINFVTQRVLIDGGFSSGVTVTPIKYNYY 141
S G VP NM + +P AFDYSD ++N + + L + + V+ +YNY+
Sbjct: 302 SFGPVPNNMVEDNPV--AFDYSDINTPYHLNTMRDK-LYESTRIDNLIVSAARYNYF 355
>UniRef50_Q9PYZ0 Cluster: ORF53; n=1; Xestia c-nigrum
granulovirus|Rep: ORF53 - Xestia c-nigrum granulosis
virus (XnGV) (Xestia c-nigrumgranulovirus)
Length = 353
Score = 93.5 bits (222), Expect = 4e-18
Identities = 50/141 (35%), Positives = 78/141 (55%), Gaps = 1/141 (0%)
Frame = -2
Query: 671 PARYVINLPHEEIDNLYNKLNWERTRRLMKGDVPSNCXTVNRSSLKYIKQAQSLLGI-PD 495
P +Y INL HEE + +L WE +RRL++ ++C N SS+KY+ +LGI D
Sbjct: 194 PVKYSINLCHEEKVLIQKELTWENSRRLLRSGKGASCTMYNTSSIKYVTDTLEILGINRD 253
Query: 494 YSQTVVDFVKMFQKIIFPYQLVPNVIIKLNNFDQIMSVAPNKAESYKKIRLFCKNDSIAI 315
+V V++F ++ Y++VP+V + +N+ + K +RL+C+ DS+AI
Sbjct: 254 SVVSVHSLVEIFNPLVLRYRVVPDVFLHINSMTKYR----------KHVRLYCEGDSLAI 303
Query: 314 SSNGIVPINMPDFSPSNNAFD 252
S G+VPIN P S FD
Sbjct: 304 SPAGVVPINRPTHSVKKFEFD 324
>UniRef50_Q8JS09 Cluster: Putative uncharacterized protein
PhopGV050; n=1; Phthorimaea operculella
granulovirus|Rep: Putative uncharacterized protein
PhopGV050 - Phthorimaea operculella granulovirus
Length = 339
Score = 92.7 bits (220), Expect = 7e-18
Identities = 47/137 (34%), Positives = 81/137 (59%), Gaps = 1/137 (0%)
Frame = -2
Query: 668 ARYVINLPHEEIDNLYNKLNWERTRRLMKGDVPSNCXTVNRSSLKYIKQAQSLLGIPDYS 489
+++ I LP EEI N++ +L+WE TRR M+ V + C +N +S +Y+ A LLGI
Sbjct: 181 SQFHIYLPPEEIMNIHKELSWEMTRRRMRTRVANRCTVLNEASYRYVLSAIELLGIDANG 240
Query: 488 QTVV-DFVKMFQKIIFPYQLVPNVIIKLNNFDQIMSVAPNKAESYKKIRLFCKNDSIAIS 312
+ + V+ F +I ++LVP++ ++LN K +RL+C+ DS+A++
Sbjct: 241 KLALHTIVEKFTSLIHSFKLVPDIFVELNRLH----------GEEKHVRLYCEYDSVAVT 290
Query: 311 SNGIVPINMPDFSPSNN 261
+ GIVP+N+P +P N+
Sbjct: 291 NAGIVPLNLPTVNPRND 307
>UniRef50_Q7T9W9 Cluster: ORF_46; n=5; Granulovirus|Rep: ORF_46 -
Adoxophyes orana granulovirus (AoGV)
Length = 349
Score = 89.8 bits (213), Expect = 5e-17
Identities = 47/132 (35%), Positives = 82/132 (62%), Gaps = 2/132 (1%)
Frame = -2
Query: 671 PARYVINLPHEEIDNLYNKLNWERTRRLMKGDVPSN-CXTVNRSSLKYIKQAQSLLGIPD 495
P + I L ++E++ ++ +L+WE RR M+G + SN C +NRSS KY++ A +L I
Sbjct: 189 PVKLCIYLTYDELNVVHKELSWESIRRQMRGGLASNACNILNRSSYKYVQDAMEILQINT 248
Query: 494 YSQTVVD-FVKMFQKIIFPYQLVPNVIIKLNNFDQIMSVAPNKAESYKKIRLFCKNDSIA 318
+ + + VKMF +I Y+LVP++ +++N + + K +RL+CK++S+A
Sbjct: 249 TNISSIHVLVKMFTPLILRYKLVPDIFVEMNRING----------NEKHVRLYCKHESLA 298
Query: 317 ISSNGIVPINMP 282
I++ G VPIN+P
Sbjct: 299 ITNAGPVPINLP 310
>UniRef50_A5IZP8 Cluster: Putative uncharacterized protein orf46;
n=1; Spodoptera litura granulovirus|Rep: Putative
uncharacterized protein orf46 - Spodoptera litura
granulovirus
Length = 358
Score = 86.6 bits (205), Expect = 5e-16
Identities = 45/130 (34%), Positives = 75/130 (57%), Gaps = 1/130 (0%)
Frame = -2
Query: 668 ARYVINLPHEEIDNLYNKLNWERTRRLMKGDVPSNCXTVNRSSLKYIKQAQSLLGIPDYS 489
A++ I L +E+ + +LNWE TRRL++G S C NR S YI A +LGI +
Sbjct: 201 AKFAIYLNCDELHIIQKELNWENTRRLLRGGKKSACKVYNRKSYNYIVDALEMLGIDNLD 260
Query: 488 -QTVVDFVKMFQKIIFPYQLVPNVIIKLNNFDQIMSVAPNKAESYKKIRLFCKNDSIAIS 312
+V + + +F ++ +++VP+V I+L NK S K +R++C+ S+AI+
Sbjct: 261 ISSVHNLMDIFNPLVLTFKIVPDVFIQL-----------NKMHSEKHVRVYCEGQSVAIT 309
Query: 311 SNGIVPINMP 282
+ G+VP N+P
Sbjct: 310 NAGMVPFNLP 319
>UniRef50_Q9DVY9 Cluster: PxORF43 peptide; n=2; Granulovirus|Rep:
PxORF43 peptide - Plutella xylostella granulovirus
Length = 414
Score = 79.8 bits (188), Expect = 6e-14
Identities = 43/135 (31%), Positives = 77/135 (57%), Gaps = 1/135 (0%)
Frame = -2
Query: 668 ARYVINLPHEEIDNLYNKLNWERTRRLMKGDVPSNCXTVNRSSLKYIKQAQSLLGIPDYS 489
A + I + ++E+ ++ +L+WE RR+++ C ++R S Y+K A LL I +
Sbjct: 257 ATFSIYMTYDELTIVHRELSWESVRRVLRDGKIGQCNVLDRKSYVYVKNALELLDIDNQD 316
Query: 488 -QTVVDFVKMFQKIIFPYQLVPNVIIKLNNFDQIMSVAPNKAESYKKIRLFCKNDSIAIS 312
++V + F ++ Y LVP+V I+LNN + + K +RL+CK ++AI+
Sbjct: 317 MKSVHMLLDAFTPLVMRYHLVPDVFIELNNI----------SGANKHVRLYCKYMALAIT 366
Query: 311 SNGIVPINMPDFSPS 267
+ G+VPIN+P +PS
Sbjct: 367 NRGLVPINLPTNNPS 381
>UniRef50_P41661 Cluster: Uncharacterized 11.8 kDa protein in
HE65-PK2 intergenic region; n=9;
Nucleopolyhedrovirus|Rep: Uncharacterized 11.8 kDa
protein in HE65-PK2 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 105
Score = 78.2 bits (184), Expect = 2e-13
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = -1
Query: 120 MKPTAADIISRVTGGRTGNNIVDIIQANNSPTEGDQLGQ 4
MKPTAADIISR TGGR GNNIVDIIQA+NSPTEGDQLGQ
Sbjct: 1 MKPTAADIISRATGGRAGNNIVDIIQAHNSPTEGDQLGQ 39
>UniRef50_O10347 Cluster: Uncharacterized 11.7 kDa protein; n=3;
Nucleopolyhedrovirus|Rep: Uncharacterized 11.7 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 108
Score = 50.0 bits (114), Expect = 5e-05
Identities = 20/36 (55%), Positives = 30/36 (83%)
Frame = -1
Query: 111 TAADIISRVTGGRTGNNIVDIIQANNSPTEGDQLGQ 4
T + ++SR+TGGR GN IV++I++N +PT+GDQL Q
Sbjct: 3 TPSHVVSRLTGGRAGNPIVEVIRSNATPTDGDQLEQ 38
>UniRef50_A3HA67 Cluster: Putative uncharacterized protein
precursor; n=1; Caldivirga maquilingensis IC-167|Rep:
Putative uncharacterized protein precursor - Caldivirga
maquilingensis IC-167
Length = 664
Score = 39.5 bits (88), Expect = 0.072
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = -2
Query: 590 LMKGDVPSNCXTVNRSSLKYIKQAQSLLGIPDYSQTVVDFVKMFQKIIFP 441
L+KG PSN +S YI LLG+ Y++TV+DF K F P
Sbjct: 311 LLKGLYPSNADVSTPASFGYIALGSVLLGLETYNETVLDFAKGFINFWLP 360
>UniRef50_A4AGL0 Cluster: Ribonuclease G; n=2; Actinobacteria
(class)|Rep: Ribonuclease G - marine actinobacterium
PHSC20C1
Length = 944
Score = 35.5 bits (78), Expect = 1.2
Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Frame = -2
Query: 671 PARYVINLPHEEIDNLYNKL-NWERTR--RLMKGDVPSNCXTVNRSSLKYIKQAQSLLGI 501
P RY++ +P+ + + KL + ER+R +++KG +P N + R++ + + Q L +
Sbjct: 409 PGRYLVYVPNGSMSGISRKLPDTERSRLKKILKGVLPENVGVIVRTAAEGATEEQLTLDV 468
Query: 500 PDYSQTVVDFVKMFQKIIFPYQL--VPNVIIKL 408
+ D K+ P L P+++IK+
Sbjct: 469 SRLTNQWADISAQVDKVQAPALLHSEPDLLIKI 501
>UniRef50_Q126X5 Cluster: Signal transduction histidine kinase; n=1;
Polaromonas sp. JS666|Rep: Signal transduction histidine
kinase - Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 439
Score = 34.7 bits (76), Expect = 2.1
Identities = 27/122 (22%), Positives = 54/122 (44%), Gaps = 1/122 (0%)
Frame = -2
Query: 533 YIKQAQSLLGIPDYSQTVVDFVKMFQKIIFPYQLVPNVIIKLNNFDQ-IMSVAPNKAESY 357
YI+ ++L+ + + + +K+ YQ + L ++ Q ++S+ +
Sbjct: 263 YIRDPRTLMQFQESQGRIRSMALIHEKL---YQSETLATVDLADYVQTLVSILMRTYTAN 319
Query: 356 KKIRLFCKNDSIAISSNGIVPINMPDFSPSNNAFDYSDYVNRTNINFVTQRVLIDGGFSS 177
K++L C+ D ++ + VP+ + NA Y+ +R VT + DGGF
Sbjct: 320 AKVKLECRLDPATVNIDTAVPVGLMLNELVTNALKYAFPNSRPGRLLVTLDAVADGGFVL 379
Query: 176 GV 171
GV
Sbjct: 380 GV 381
>UniRef50_A3H9B7 Cluster: Bacterio-opsin activator, HTH; n=1;
Caldivirga maquilingensis IC-167|Rep: Bacterio-opsin
activator, HTH - Caldivirga maquilingensis IC-167
Length = 229
Score = 34.7 bits (76), Expect = 2.1
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -2
Query: 662 YVINLPHEEIDNLYNKL-NWERTRRLMKGDVPSNCXTVNRSSLKYIKQAQSLLGIPDY 492
Y+IN E+I +LY KL N+ + +P N NRS+L Y+ + + + Y
Sbjct: 120 YLINDHEEKISSLYEKLNNYGELLNFITNKIPGNIPLFNRSTLPYLTNTEGKILVYAY 177
>UniRef50_Q8IHR6 Cluster: Coat protein, gamma subunit, putative; n=6;
Plasmodium|Rep: Coat protein, gamma subunit, putative -
Plasmodium falciparum (isolate 3D7)
Length = 1068
Score = 34.3 bits (75), Expect = 2.7
Identities = 38/162 (23%), Positives = 67/162 (41%), Gaps = 8/162 (4%)
Frame = -2
Query: 662 YVINLPHEEIDNLYNKLNWERTRRLMKGD---VPSNCXTVNRSSLKYIKQAQSLLGIPDY 492
Y++ +E+D +++ E +L + +N N + + + + I
Sbjct: 647 YMLKEKIKELDTSNKQISNEYEEKLQNNENINEHNNIHYSNNNLIDQLLEYDQNTNIDQL 706
Query: 491 SQTVVDFVKMFQKIIFPYQLVPNVIIK---LNNFDQIMSVAPNKAE--SYKKIRLFCKND 327
+ + ++ K F YQ V II LNN D + S NK SY +I +
Sbjct: 707 LYFISNHIEKDPKEEFSYQHVKEQIIASNDLNNKDYVSSPFINKKNKTSYNEIPNLTNTN 766
Query: 326 SIAISSNGIVPINMPDFSPSNNAFDYSDYVNRTNINFVTQRV 201
SI+ + N + + PD NN Y D N +NIN + + +
Sbjct: 767 SIS-NINKYIDLT-PDTLYINNMSKYIDMYNLSNINIINKSI 806
>UniRef50_A0EBL3 Cluster: Chromosome undetermined scaffold_88, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_88,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 341
Score = 33.9 bits (74), Expect = 3.6
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = -2
Query: 542 SLKYIKQAQ-SLLGIPDYSQTVVDFVKMFQKIIFPYQLVPNVIIKLNNFDQIMSVAPNKA 366
S K IK + SL +YS ++D KM + LVPN+ I L N+ Q +
Sbjct: 128 SFKEIKSYKTSLFRKSNYSNLMIDSFKMVNLVNMALSLVPNLKIALKNYPQDRLLQKLTF 187
Query: 365 ESYKKIRLFCKN 330
Y++I+ + KN
Sbjct: 188 NIYQEIQGYQKN 199
>UniRef50_Q9YW59 Cluster: Putative uncharacterized protein MSV032;
n=1; Melanoplus sanguinipes entomopoxvirus|Rep: Putative
uncharacterized protein MSV032 - Melanoplus sanguinipes
entomopoxvirus (MsEPV)
Length = 252
Score = 33.5 bits (73), Expect = 4.8
Identities = 23/89 (25%), Positives = 43/89 (48%)
Frame = -2
Query: 581 GDVPSNCXTVNRSSLKYIKQAQSLLGIPDYSQTVVDFVKMFQKIIFPYQLVPNVIIKLNN 402
GD N N+ ++ +++ + PD +++V +FV +K I + + P+V K NN
Sbjct: 73 GDATFNFLRANK--IETLEEPSHIKITPDNNESVQEFVDE-EKKINSFTIGPDVTEKFNN 129
Query: 401 FDQIMSVAPNKAESYKKIRLFCKNDSIAI 315
+ + PN + LF +ND+ I
Sbjct: 130 ISILENNLPNDGFKFSNNVLFYQNDTTDI 158
>UniRef50_Q89J50 Cluster: Blr5434 protein; n=1; Bradyrhizobium
japonicum|Rep: Blr5434 protein - Bradyrhizobium
japonicum
Length = 410
Score = 33.5 bits (73), Expect = 4.8
Identities = 26/110 (23%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Frame = -2
Query: 470 VKMFQKIIFPYQLVPNVIIKLNNFDQIMSVAPNKAESYKKIRLFCKNDSIAISSNGIVPI 291
+K++ +I P + + + + FD ++S E F IA+S +G++ I
Sbjct: 141 IKVYADMISP-AMCHDAVAQAGKFDLVVS--RQVLEHIVDFENFFDCVKIALSDDGLLFI 197
Query: 290 NMPDFSPSNNAFDYSDYVNRTNINFVTQRVLIDGGFSSGVTVTPI-KYNY 144
++PDF+P + A D S + ++++ T+ L+ G + KYN+
Sbjct: 198 DVPDFAPGSTAGDLS-VLWEEHVSYFTEPTLVALLARHGFEAVSVKKYNF 246
>UniRef50_Q1D9P1 Cluster: Putative uncharacterized protein; n=1;
Myxococcus xanthus DK 1622|Rep: Putative uncharacterized
protein - Myxococcus xanthus (strain DK 1622)
Length = 669
Score = 33.5 bits (73), Expect = 4.8
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = -2
Query: 671 PARYVINLPHEEIDNLYNKLNWERTRRLMKG 579
PARY +++ H +I+N +NKLN + + L G
Sbjct: 605 PARYTVDVVHAQINNTFNKLNSQLNKGLTGG 635
>UniRef50_UPI000049833D Cluster: hypothetical protein 55.t00029;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 55.t00029 - Entamoeba histolytica HM-1:IMSS
Length = 505
Score = 33.1 bits (72), Expect = 6.3
Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Frame = -2
Query: 503 IPDYSQTVVDFVKMFQKIIFPYQLVPNVIIKLN-NFDQIMSVAPNKAESYKKIRLFCKND 327
IPD + V M +K F YQ +++ ++N N +QI+ + + Y + +FC +
Sbjct: 412 IPDDEIVALQLVSMREKCDFAYQFAMDMLKRMNKNNNQILQILIAIGD-YAEALIFCISH 470
Query: 326 SIAISSNGIVPINMPDFSPSNNAFDYSDYVNRTNIN 219
+ +S++ I + +P F + Y+ N N
Sbjct: 471 KVQLSNHDITSLLSQVKNPV-LLFQLNQYLQNKNTN 505
>UniRef50_Q7YYX8 Cluster: Putative uncharacterized protein; n=3;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum
Length = 1316
Score = 33.1 bits (72), Expect = 6.3
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Frame = -2
Query: 425 NVIIKLNNFDQIMSVAPNKAESYKKIRLFCKNDSIAISSNGI------VPINMPDFSPSN 264
N + K NNFD I ++ SY ++ + S + SSN I +PI+M N
Sbjct: 640 NSLHKENNFDIINTIVQKDTISYDEVNSILVSPSKSFSSNSIFIPESNLPISMFHVIQKN 699
Query: 263 NAFDYSDYVNRTNINFVTQR 204
NA NFV+++
Sbjct: 700 NASSKPQESKENKFNFVSEK 719
>UniRef50_A4BXH2 Cluster: Leucyl-tRNA synthetase; n=2; Bacteria|Rep:
Leucyl-tRNA synthetase - Polaribacter irgensii 23-P
Length = 1117
Score = 32.7 bits (71), Expect = 8.3
Identities = 33/136 (24%), Positives = 59/136 (43%), Gaps = 4/136 (2%)
Frame = -2
Query: 551 NRSSLKYIKQAQSLLGIPDYSQTVVDFVKMFQKIIFPYQLVP--NVIIKLNNFDQIMSVA 378
++ SL+Y K+ +G +++ + + + +QK +F +VP KL N I+ +
Sbjct: 714 SKESLEYWKEVDLYIGGSEHATGHLLYARFWQKFLFDKGIVPVDEFAKKLINQGMILGTS 773
Query: 377 PNKAESYKKIRLFCKNDSIAISSNGIVPINMPDFSPSNNAFDYSDYVNRTNINFVTQRVL 198
A Y + F KN SN V +P S N F+ D N++ +
Sbjct: 774 ---AFVY-RATAFVKNGCSTEKSNDDVLDKIPTVLVSKNLFNSDDEFEAVVKNYLLDKGF 829
Query: 197 IDGGFSSGVTV--TPI 156
++ F+ V + TPI
Sbjct: 830 LNPNFADLVMLVKTPI 845
>UniRef50_Q76DY2 Cluster: AG-motif binding protein-2; n=2; core
eudicotyledons|Rep: AG-motif binding protein-2 -
Nicotiana tabacum (Common tobacco)
Length = 289
Score = 32.7 bits (71), Expect = 8.3
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 4/40 (10%)
Frame = -2
Query: 605 ERTRRLMKG---DVPS-NCXTVNRSSLKYIKQAQSLLGIP 498
+R RR +G D+PS +C +VN+ S K +KQ + LL +P
Sbjct: 155 KRRRRRQRGSFADLPSEHCMSVNKPSFKSVKQREPLLSLP 194
>UniRef50_A0DQG6 Cluster: Chromosome undetermined scaffold_6, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_6,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 565
Score = 32.7 bits (71), Expect = 8.3
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = -2
Query: 566 NCXTVNRSSLKYIKQAQSLLGIPDYSQTVVDFVKMF--QKIIFPYQLVPNVIIKLNNFDQ 393
NC ++ SSL+Y+ Q ++ D S T +D +F K+ +PY L +I N +
Sbjct: 140 NCQSMTSSSLEYLFQGNQIIKYLDLSHTKIDNQGIFYISKLQWPY-LETFIIQWCNKINN 198
Query: 392 IMSVAPNKAESYKKIRL 342
+ + N AE++ +++
Sbjct: 199 LNDLGQN-AENFPNLKI 214
>UniRef50_A0DDZ4 Cluster: Chromosome undetermined scaffold_47, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_47,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 398
Score = 32.7 bits (71), Expect = 8.3
Identities = 25/83 (30%), Positives = 37/83 (44%)
Frame = -2
Query: 557 TVNRSSLKYIKQAQSLLGIPDYSQTVVDFVKMFQKIIFPYQLVPNVIIKLNNFDQIMSVA 378
+V SS + K +S P Y T + + KI FP L+ + +K FD +
Sbjct: 35 SVQMSSNQITKDMESK-NYPRYQYTSIQIEQQLCKIFFP--LIKDENVKQMIFDFYQTEF 91
Query: 377 PNKAESYKKIRLFCKNDSIAISS 309
A+ Y+K+R CKN I S
Sbjct: 92 FTIADQYQKLREICKNTIDLIQS 114
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 660,035,296
Number of Sequences: 1657284
Number of extensions: 13361716
Number of successful extensions: 36755
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 35547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36733
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -