Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc14e05
         (815 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-3220|ABI31006.1| 1470|Drosophila melanogaster CG40500-P...    31   1.4  
AE014298-3219|ABI31005.1| 1626|Drosophila melanogaster CG40500-P...    31   1.4  
AE014298-3218|EAL24565.1| 1741|Drosophila melanogaster CG40500-P...    31   1.4  
AE014298-3217|ABI31004.1| 1513|Drosophila melanogaster CG40500-P...    31   1.4  
AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin pro...    31   2.5  
AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC...    31   2.5  
AY089234-1|AAL89972.1|  355|Drosophila melanogaster AT02512p pro...    29   5.8  
AL009192-1|CAA15687.1|  326|Drosophila melanogaster EG:133E12.3 ...    29   5.8  
AE014298-307|AAF45703.2|  355|Drosophila melanogaster CG4406-PA ...    29   5.8  

>AE014298-3220|ABI31006.1| 1470|Drosophila melanogaster CG40500-PD,
           isoform D protein.
          Length = 1470

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 15/44 (34%), Positives = 28/44 (63%)
 Frame = -2

Query: 778 LTNWPNLILKNLSSLESYETLKIKLALSKYMAMLSTLEMTQPLL 647
           L+++P++ L NLS+LES +  + +LA   +  +  TL + Q +L
Sbjct: 656 LSDFPHIALYNLSTLESLDLARNQLASIDFFKLSGTLNLRQLIL 699


>AE014298-3219|ABI31005.1| 1626|Drosophila melanogaster CG40500-PB,
           isoform B protein.
          Length = 1626

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 15/44 (34%), Positives = 28/44 (63%)
 Frame = -2

Query: 778 LTNWPNLILKNLSSLESYETLKIKLALSKYMAMLSTLEMTQPLL 647
           L+++P++ L NLS+LES +  + +LA   +  +  TL + Q +L
Sbjct: 656 LSDFPHIALYNLSTLESLDLARNQLASIDFFKLSGTLNLRQLIL 699


>AE014298-3218|EAL24565.1| 1741|Drosophila melanogaster CG40500-PA,
           isoform A protein.
          Length = 1741

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 15/44 (34%), Positives = 28/44 (63%)
 Frame = -2

Query: 778 LTNWPNLILKNLSSLESYETLKIKLALSKYMAMLSTLEMTQPLL 647
           L+++P++ L NLS+LES +  + +LA   +  +  TL + Q +L
Sbjct: 656 LSDFPHIALYNLSTLESLDLARNQLASIDFFKLSGTLNLRQLIL 699


>AE014298-3217|ABI31004.1| 1513|Drosophila melanogaster CG40500-PC,
           isoform C protein.
          Length = 1513

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 15/44 (34%), Positives = 28/44 (63%)
 Frame = -2

Query: 778 LTNWPNLILKNLSSLESYETLKIKLALSKYMAMLSTLEMTQPLL 647
           L+++P++ L NLS+LES +  + +LA   +  +  TL + Q +L
Sbjct: 656 LSDFPHIALYNLSTLESLDLARNQLASIDFFKLSGTLNLRQLIL 699


>AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin protein.
          Length = 16215

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 18/64 (28%), Positives = 32/64 (50%)
 Frame = -2

Query: 370   NCNVRIAKTFGASKRKNTTRSDDYESNKQPDYDMDLSDFSITEVEATQYLTLLLIVEHAY 191
             N N+R + T+    +K  T+S      ++PD+   L D+ +TE + T  L + L  E   
Sbjct: 15052 NTNLRDSGTYTCKVKKQETQSTVEVLQRKPDFIKVLEDYEVTEKD-TAILDVELTTEATE 15110

Query: 190   LHYY 179
             + +Y
Sbjct: 15111 VTWY 15114


>AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC,
             isoform C protein.
          Length = 18074

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 18/64 (28%), Positives = 32/64 (50%)
 Frame = -2

Query: 370   NCNVRIAKTFGASKRKNTTRSDDYESNKQPDYDMDLSDFSITEVEATQYLTLLLIVEHAY 191
             N N+R + T+    +K  T+S      ++PD+   L D+ +TE + T  L + L  E   
Sbjct: 16911 NTNLRDSGTYTCKVKKQETQSTVEVLQRKPDFIKVLEDYEVTEKD-TAILDVELTTEATE 16969

Query: 190   LHYY 179
             + +Y
Sbjct: 16970 VTWY 16973


>AY089234-1|AAL89972.1|  355|Drosophila melanogaster AT02512p
           protein.
          Length = 355

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +1

Query: 145 CNIQTPRNF*KYNNANRHVRRSATELDIEW 234
           CN + PR    YNNAN+H+     ++++++
Sbjct: 93  CNARNPRPGQVYNNANQHINVYGDDVEVDY 122


>AL009192-1|CAA15687.1|  326|Drosophila melanogaster EG:133E12.3
           protein.
          Length = 326

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +1

Query: 145 CNIQTPRNF*KYNNANRHVRRSATELDIEW 234
           CN + PR    YNNAN+H+     ++++++
Sbjct: 93  CNARNPRPGQVYNNANQHINVYGDDVEVDY 122


>AE014298-307|AAF45703.2|  355|Drosophila melanogaster CG4406-PA
           protein.
          Length = 355

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +1

Query: 145 CNIQTPRNF*KYNNANRHVRRSATELDIEW 234
           CN + PR    YNNAN+H+     ++++++
Sbjct: 93  CNARNPRPGQVYNNANQHINVYGDDVEVDY 122


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,744,568
Number of Sequences: 53049
Number of extensions: 685515
Number of successful extensions: 1796
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1796
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)