Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc14e04
         (715 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   7.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.5  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   9.9  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   9.9  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   9.9  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 229 TKVNVLKPKTPRPS 270
           TKV+  KP+ PRP+
Sbjct: 258 TKVSRRKPRPPRPT 271


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 11/49 (22%), Positives = 19/49 (38%)
 Frame = +3

Query: 360 FPDFVEARFVAQYLSNVQSRIVGVRTPRDPGRTLVHVEVVAHSVTRPVA 506
           +P F   R +          +  V  PR+  R + +V+  A     P+A
Sbjct: 145 YPSFARGRSLYDSRGRHSEIVETVYDPREDDRVVCYVQAAARYRKEPLA 193


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 155 DGTRSRMKSRNRSESLHRYIPFDW 226
           D T+S  +S+N+SES  + +  D+
Sbjct: 250 DRTQSMSESKNKSESAWKNLREDY 273


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 155 DGTRSRMKSRNRSESLHRYIPFDW 226
           D T+S  +S+N+SES  + +  D+
Sbjct: 250 DRTQSMSESKNKSESAWKNLREDY 273


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 155 DGTRSRMKSRNRSESLHRYIPFDW 226
           D T+S  +S+N+SES  + +  D+
Sbjct: 250 DRTQSMSESKNKSESAWKNLREDY 273


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,439
Number of Sequences: 336
Number of extensions: 3252
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)