Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc14e04
         (715 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.    25   3.1  
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    24   5.4  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   7.2  
AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsiv...    23   7.2  
AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic pr...    23   9.5  

>AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.
          Length = 332

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -1

Query: 85  KVNASR*PGSEPSRSLDHSCNRDARFG 5
           +++A++    EP R +D   NRDA FG
Sbjct: 226 EIDAAQQLMGEPYRKMDGCLNRDAGFG 252


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 19/69 (27%), Positives = 30/69 (43%)
 Frame = -3

Query: 458 GPSGVSWRPYPDDPGLNVGQILSNEPGFYKVGEYGIRHEDLIEIVAVDKGSDHPKAKNLR 279
           G   +   P P  P LN G   ++E      GE  ++H   + +V   K +D P    L+
Sbjct: 438 GEEALRVTPPPIAPYLNGG---NDELDNGDAGE--LQHVTRVRLVQFQKNTDEPMGITLK 492

Query: 278 GDYDGRGVL 252
              DGR ++
Sbjct: 493 MTEDGRCIV 501


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -3

Query: 194  LTDFEISYVNAYHRRVLDTLSPILKERGLLKDLEWLEGQCIPIT 63
            +T  E++YVN Y  + L T+ P  K   +L+  +     C+P+T
Sbjct: 3126 VTHGELNYVNCYSDQGLVTIFP--KVEAILQSHDEYR-NCLPLT 3166


>AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsive
           protein 1 protein.
          Length = 447

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -3

Query: 458 GPSGVSWRPYPDDPGLNVGQILSNEPGFYKVGE 360
           G SG++  P     G +     +N PGFY  GE
Sbjct: 315 GDSGITGVPPIPADGPSPAGPYTNVPGFYSFGE 347


>AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic
           protein.
          Length = 379

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 457 VRPGSRGVRTPTIL 416
           VRPG +G R PT L
Sbjct: 138 VRPGVKGKRAPTFL 151


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 733,693
Number of Sequences: 2352
Number of extensions: 15268
Number of successful extensions: 30
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)