Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14d19
(623 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q2F5S9 Cluster: Calcitonin gene-related peptide-recepto... 191 1e-47
UniRef50_UPI0000DB6E76 Cluster: PREDICTED: similar to calcitonin... 100 3e-20
UniRef50_Q7PTA4 Cluster: ENSANGP00000016026; n=1; Anopheles gamb... 96 7e-19
UniRef50_Q4RRY0 Cluster: Chromosome 7 SCAF15001, whole genome sh... 91 2e-17
UniRef50_A7RMB0 Cluster: Predicted protein; n=1; Nematostella ve... 91 3e-17
UniRef50_O75575 Cluster: DNA-directed RNA polymerase III subunit... 91 3e-17
UniRef50_UPI0000E4A5C9 Cluster: PREDICTED: similar to CGRP-recep... 88 1e-16
UniRef50_Q8T885 Cluster: Calcitonin gene-related peptide recepto... 83 4e-15
UniRef50_Q7KUX1 Cluster: CG4875-PB, isoform B; n=3; Sophophora|R... 72 1e-11
UniRef50_Q0G841 Cluster: Putative uncharacterized protein; n=1; ... 65 1e-09
UniRef50_A7Q5D6 Cluster: Chromosome undetermined scaffold_53, wh... 59 1e-07
UniRef50_Q5DE86 Cluster: SJCHGC05325 protein; n=1; Schistosoma j... 59 1e-07
UniRef50_Q013X9 Cluster: Predicted RNA polymerase III subunit C1... 51 2e-05
UniRef50_A5E328 Cluster: Putative uncharacterized protein; n=1; ... 50 5e-05
UniRef50_A3LNP3 Cluster: Predicted protein; n=4; Saccharomycetal... 48 2e-04
UniRef50_UPI000155C0D6 Cluster: PREDICTED: hypothetical protein;... 48 2e-04
UniRef50_Q9C0Z9 Cluster: DNA-directed RNA polymerase III complex... 44 0.002
UniRef50_P47076 Cluster: DNA-directed RNA polymerase III subunit... 44 0.004
UniRef50_A3H8T8 Cluster: RNA polymerase Rpb4; n=1; Caldivirga ma... 43 0.005
UniRef50_Q5CNZ7 Cluster: Putative uncharacterized protein; n=2; ... 41 0.028
UniRef50_Q6FSY0 Cluster: Similar to sp|P47076 Saccharomyces cere... 40 0.064
UniRef50_Q2GVZ1 Cluster: Putative uncharacterized protein; n=1; ... 38 0.26
UniRef50_UPI0000F20CC6 Cluster: PREDICTED: similar to nephronoph... 36 0.60
UniRef50_A7R2M4 Cluster: Chromosome undetermined scaffold_435, w... 36 1.0
UniRef50_Q30Q67 Cluster: Putative uncharacterized protein; n=1; ... 35 1.4
UniRef50_UPI0000498FEB Cluster: hypothetical protein 105.t00019;... 35 1.8
UniRef50_Q8SRV8 Cluster: DNA-DIRECTED RNA POLYMERASE II 16kDa PO... 35 1.8
UniRef50_A2E098 Cluster: Bromodomain containing protein; n=2; Tr... 34 2.4
UniRef50_Q9KEG2 Cluster: BH0890 protein; n=1; Bacillus haloduran... 33 4.2
UniRef50_A0EGG7 Cluster: Chromosome undetermined scaffold_95, wh... 33 4.2
UniRef50_Q2QQM6 Cluster: Expressed protein; n=3; Oryza sativa|Re... 33 5.6
UniRef50_UPI000150A0FA Cluster: Type III restriction enzyme, res... 33 7.3
UniRef50_Q0IHB6 Cluster: MGC154468 protein; n=1; Xenopus laevis|... 33 7.3
UniRef50_Q8SML4 Cluster: Putative uncharacterized protein; n=1; ... 33 7.3
UniRef50_Q4UCH4 Cluster: Bifunctional nuclease, putative; n=2; T... 33 7.3
UniRef50_A2E3C1 Cluster: Zinc finger in N-recognin family protei... 33 7.3
UniRef50_UPI0000E80337 Cluster: PREDICTED: hypothetical protein;... 32 9.7
>UniRef50_Q2F5S9 Cluster: Calcitonin gene-related peptide-receptor
component protein; n=3; Endopterygota|Rep: Calcitonin
gene-related peptide-receptor component protein - Bombyx
mori (Silk moth)
Length = 127
Score = 191 bits (465), Expect = 1e-47
Identities = 94/95 (98%), Positives = 95/95 (100%)
Frame = -3
Query: 558 REASLATVTYETVHYLQDTECKNQSAQKIQKFLEAMKKYKLTKVEKLMMVNTPPRTELEI 379
REASLATVTYETVHYLQDTECKNQSAQKIQKFLEAMKKYKLTKVEKLMMVNTPPRTELEI
Sbjct: 33 REASLATVTYETVHYLQDTECKNQSAQKIQKFLEAMKKYKLTKVEKLMMVNTPPRTELEI 92
Query: 378 QLIVQESEERLSEEDVQDIISIVSQHLLANDSSNT 274
QLIVQESEERLSEEDVQDIISIVSQHLLAND+SNT
Sbjct: 93 QLIVQESEERLSEEDVQDIISIVSQHLLANDNSNT 127
>UniRef50_UPI0000DB6E76 Cluster: PREDICTED: similar to calcitonin
gene-related peptide-receptor component protein; n=1;
Apis mellifera|Rep: PREDICTED: similar to calcitonin
gene-related peptide-receptor component protein - Apis
mellifera
Length = 130
Score = 100 bits (239), Expect = 3e-20
Identities = 43/91 (47%), Positives = 70/91 (76%)
Frame = -3
Query: 558 REASLATVTYETVHYLQDTECKNQSAQKIQKFLEAMKKYKLTKVEKLMMVNTPPRTELEI 379
++ LA++TY+T+ YL++T CK QS +KI+ FL AM+ +KLTK E L ++N P+T LEI
Sbjct: 37 KQNQLASITYQTIRYLENTSCKIQSPEKIKDFLRAMEPFKLTKCEILTLLNVCPKTPLEI 96
Query: 378 QLIVQESEERLSEEDVQDIISIVSQHLLAND 286
QLIV++SE+RL++E+V ++ +V+ +L N+
Sbjct: 97 QLIVEDSEDRLTDEEVDSLLQVVANYLNENE 127
>UniRef50_Q7PTA4 Cluster: ENSANGP00000016026; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000016026 - Anopheles gambiae
str. PEST
Length = 140
Score = 95.9 bits (228), Expect = 7e-19
Identities = 45/77 (58%), Positives = 59/77 (76%)
Frame = -3
Query: 549 SLATVTYETVHYLQDTECKNQSAQKIQKFLEAMKKYKLTKVEKLMMVNTPPRTELEIQLI 370
+LAT+TYETV YL+DT CK QS I FL+AMK++ LTK E LMMVN PP + L IQL+
Sbjct: 34 NLATITYETVQYLEDTPCKEQSTAGIIDFLQAMKEFNLTKNECLMMVNDPPSSPLHIQLM 93
Query: 369 VQESEERLSEEDVQDII 319
+++S+ERL+EE V I+
Sbjct: 94 IEDSDERLTEEQVTRIL 110
>UniRef50_Q4RRY0 Cluster: Chromosome 7 SCAF15001, whole genome
shotgun sequence; n=6; Euteleostomi|Rep: Chromosome 7
SCAF15001, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 144
Score = 91.1 bits (216), Expect = 2e-17
Identities = 41/86 (47%), Positives = 61/86 (70%)
Frame = -3
Query: 555 EASLATVTYETVHYLQDTECKNQSAQKIQKFLEAMKKYKLTKVEKLMMVNTPPRTELEIQ 376
+ +L T+ YET+ YL T C Q + +++FL M +KLTK EKL ++N P+T +EIQ
Sbjct: 39 QQNLNTIMYETLKYLSQTPCSRQRPETVKEFLTTMMHHKLTKAEKLQLLNHRPQTAVEIQ 98
Query: 375 LIVQESEERLSEEDVQDIISIVSQHL 298
L+V+ESEERLSEE ++++I V+Q L
Sbjct: 99 LMVEESEERLSEEQIEELIQTVAQVL 124
>UniRef50_A7RMB0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 160
Score = 90.6 bits (215), Expect = 3e-17
Identities = 41/88 (46%), Positives = 64/88 (72%), Gaps = 1/88 (1%)
Frame = -3
Query: 555 EASLATVTYETVHYLQDTECKNQSAQKIQKFLEAMKKYKLTKVEKLMMVNTPPRTELEIQ 376
+ +LAT++YE YL+ T CK+QS + I++FL A+ + LTK EKL ++N P T +EIQ
Sbjct: 43 QVNLATISYEARKYLEKTPCKHQSPEVIEEFLRALAPFNLTKAEKLQLLNLRPETPVEIQ 102
Query: 375 LIVQESEERL-SEEDVQDIISIVSQHLL 295
LI++ESEERL ++ D Q ++ I+++ LL
Sbjct: 103 LIIEESEERLKTDSDFQQLLDIITEKLL 130
>UniRef50_O75575 Cluster: DNA-directed RNA polymerase III subunit
RPC9; n=21; Euteleostomi|Rep: DNA-directed RNA
polymerase III subunit RPC9 - Homo sapiens (Human)
Length = 148
Score = 90.6 bits (215), Expect = 3e-17
Identities = 41/88 (46%), Positives = 65/88 (73%)
Frame = -3
Query: 555 EASLATVTYETVHYLQDTECKNQSAQKIQKFLEAMKKYKLTKVEKLMMVNTPPRTELEIQ 376
+ +L T+TYET+ Y+ T C++QS + +++FL A+K +KLTK EKL ++N P T +EIQ
Sbjct: 39 QQNLNTITYETLKYISKTPCRHQSPEIVREFLTALKSHKLTKAEKLQLLNHRPVTAVEIQ 98
Query: 375 LIVQESEERLSEEDVQDIISIVSQHLLA 292
L+V+ESEERL+EE ++ ++ V+ L A
Sbjct: 99 LMVEESEERLTEEQIEALLHTVTSILPA 126
>UniRef50_UPI0000E4A5C9 Cluster: PREDICTED: similar to CGRP-receptor
component protein; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to CGRP-receptor
component protein - Strongylocentrotus purpuratus
Length = 148
Score = 88.2 bits (209), Expect = 1e-16
Identities = 37/87 (42%), Positives = 63/87 (72%)
Frame = -3
Query: 558 REASLATVTYETVHYLQDTECKNQSAQKIQKFLEAMKKYKLTKVEKLMMVNTPPRTELEI 379
++ +LAT++YET+ YL++T C Q+ + ++KFL+A+ Y LTK EKL ++N P T +EI
Sbjct: 45 KKQNLATISYETIKYLENTPCGLQTPEVVEKFLQALAPYNLTKSEKLQLLNHRPSTSVEI 104
Query: 378 QLIVQESEERLSEEDVQDIISIVSQHL 298
+V+E EERLSE+ ++ +I +++ L
Sbjct: 105 MAMVEECEERLSEDQMESLIKVITSML 131
>UniRef50_Q8T885 Cluster: Calcitonin gene-related peptide receptor
component protein; n=1; Ciona intestinalis|Rep:
Calcitonin gene-related peptide receptor component
protein - Ciona intestinalis (Transparent sea squirt)
Length = 124
Score = 83.4 bits (197), Expect = 4e-15
Identities = 40/82 (48%), Positives = 58/82 (70%)
Frame = -3
Query: 549 SLATVTYETVHYLQDTECKNQSAQKIQKFLEAMKKYKLTKVEKLMMVNTPPRTELEIQLI 370
+L+T+TYET+ YL +T Q+ I+ L+A+ + LTK EKL +VN P T +EI LI
Sbjct: 27 NLSTITYETIKYLSETPAGLQNQACIETTLKALLPFGLTKAEKLQLVNLRPTTAVEISLI 86
Query: 369 VQESEERLSEEDVQDIISIVSQ 304
V+ESEER++EE + +II IVS+
Sbjct: 87 VEESEERITEEQIDEIIEIVSR 108
>UniRef50_Q7KUX1 Cluster: CG4875-PB, isoform B; n=3; Sophophora|Rep:
CG4875-PB, isoform B - Drosophila melanogaster (Fruit
fly)
Length = 238
Score = 71.7 bits (168), Expect = 1e-11
Identities = 29/83 (34%), Positives = 54/83 (65%)
Frame = -3
Query: 549 SLATVTYETVHYLQDTECKNQSAQKIQKFLEAMKKYKLTKVEKLMMVNTPPRTELEIQLI 370
+LATVTYE + YL+++ CK Q+ + I +++ + Y+L E L M+N PP + L QL+
Sbjct: 34 NLATVTYEALQYLEESPCKTQTRENIMNYVKDLSSYRLKSQEILQMINDPPTSALHTQLL 93
Query: 369 VQESEERLSEEDVQDIISIVSQH 301
+ +++ L++E+ + II + +H
Sbjct: 94 IDDNKAPLTDEENEKIIQLSYKH 116
>UniRef50_Q0G841 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 128
Score = 64.9 bits (151), Expect = 1e-09
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Frame = -3
Query: 546 LATVTYETVHYLQDTECKNQSAQKIQKFLEAMKKYKLTKVEKLMMVNTPPRTELEIQLIV 367
L+TV YET YL + Q+ I + + + +KLT E L ++N P T +IQL++
Sbjct: 39 LSTVIYETKKYLNTSPAVTQNEAVICELIPKLAPFKLTGAETLQVINLRPSTTADIQLLI 98
Query: 366 QESEERL-SEEDVQDIISIVSQHL 298
+E+EER SEED++ ++S VS+ L
Sbjct: 99 EETEERFPSEEDLEKLVSTVSECL 122
>UniRef50_A7Q5D6 Cluster: Chromosome undetermined scaffold_53, whole
genome shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome undetermined scaffold_53, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 157
Score = 58.8 bits (136), Expect = 1e-07
Identities = 29/81 (35%), Positives = 49/81 (60%)
Frame = -3
Query: 552 ASLATVTYETVHYLQDTECKNQSAQKIQKFLEAMKKYKLTKVEKLMMVNTPPRTELEIQL 373
A +A ++ YL ++ NQ+ + I + LE KKY L K E L ++N P + +EI
Sbjct: 35 APIAASEFKVYDYLVESAACNQTRESINELLEKCKKYDLAKAEILNIINIRPASPVEIDP 94
Query: 372 IVQESEERLSEEDVQDIISIV 310
I++ESE+R+ E ++D+I +V
Sbjct: 95 IIEESEKRMG-EGIEDLIEMV 114
>UniRef50_Q5DE86 Cluster: SJCHGC05325 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05325 protein - Schistosoma
japonicum (Blood fluke)
Length = 140
Score = 58.8 bits (136), Expect = 1e-07
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = -3
Query: 540 TVTYETVHYLQD-TECKNQSAQKIQKFLEAMKKYKLTKVEKLMMVNTPPRTELEIQLIVQ 364
T+ Y + YL C Q+ +Q F +K Y LTK E LM++N P T++E+ +I+
Sbjct: 36 TLLYTSAKYLNSKAPCSKQTEAGVQAFANEVKVYNLTKTEILMLINHCPSTQVELSVIIS 95
Query: 363 ESEERLSEEDVQDIISIVSQH 301
+ + RLS ++ ++ +H
Sbjct: 96 DLDSRLSNSQADQLLQLIEKH 116
>UniRef50_Q013X9 Cluster: Predicted RNA polymerase III subunit C17;
n=2; Ostreococcus|Rep: Predicted RNA polymerase III
subunit C17 - Ostreococcus tauri
Length = 121
Score = 51.2 bits (117), Expect = 2e-05
Identities = 19/64 (29%), Positives = 42/64 (65%)
Frame = -3
Query: 489 QSAQKIQKFLEAMKKYKLTKVEKLMMVNTPPRTELEIQLIVQESEERLSEEDVQDIISIV 310
Q+ +++Q F++A+ +LTK E + ++N PR + I +V+ +RLS+++V D++ +
Sbjct: 58 QARERVQAFIDAVDAVELTKAEIVQLINLKPRERVVIHAVVESCAKRLSDDEVDDLLHLC 117
Query: 309 SQHL 298
++L
Sbjct: 118 EEYL 121
>UniRef50_A5E328 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 195
Score = 50.0 bits (114), Expect = 5e-05
Identities = 22/58 (37%), Positives = 39/58 (67%)
Frame = -3
Query: 477 KIQKFLEAMKKYKLTKVEKLMMVNTPPRTELEIQLIVQESEERLSEEDVQDIISIVSQ 304
K ++ ++ + KY+L KVEKL ++N+ PR + + +V+E EER EE ++II+ + Q
Sbjct: 110 KFKELMQFLNKYELMKVEKLQIMNSLPRELVILTTLVEECEERFGEEGCEEIIAKIRQ 167
>UniRef50_A3LNP3 Cluster: Predicted protein; n=4;
Saccharomycetales|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 136
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/78 (28%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = -3
Query: 549 SLATVTYETVHYLQDTECKN-QSAQKIQKFLEAMKKYKLTKVEKLMMVNTPPRTELEIQL 373
+L +T + + Y+ ++ + S +K + ++ + Y+L KVEKL +VN+ PR+ + +
Sbjct: 56 NLEVITRDILSYVSNSATASIDSTEKFSELVQFLNNYELMKVEKLQIVNSLPRSMVTLYS 115
Query: 372 IVQESEERLSEEDVQDII 319
IV+E ++R E+ +I+
Sbjct: 116 IVEECDQRFDEQICNNIL 133
>UniRef50_UPI000155C0D6 Cluster: PREDICTED: hypothetical protein;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein - Ornithorhynchus anatinus
Length = 187
Score = 47.6 bits (108), Expect = 2e-04
Identities = 19/42 (45%), Positives = 31/42 (73%)
Frame = -3
Query: 555 EASLATVTYETVHYLQDTECKNQSAQKIQKFLEAMKKYKLTK 430
+ +L T+ YET+ Y+ T C++QS + +++FL AMK +KLTK
Sbjct: 146 QQNLNTIMYETLKYISKTPCRHQSPEIVREFLTAMKSHKLTK 187
>UniRef50_Q9C0Z9 Cluster: DNA-directed RNA polymerase III complex
subunit Rpc17; n=1; Schizosaccharomyces pombe|Rep:
DNA-directed RNA polymerase III complex subunit Rpc17 -
Schizosaccharomyces pombe (Fission yeast)
Length = 129
Score = 44.4 bits (100), Expect = 0.002
Identities = 20/82 (24%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = -3
Query: 549 SLATVTYETVHYLQDT-ECKNQSAQKIQKFLEAMKKYKLTKVEKLMMVNTPPRTELEIQL 373
+L T+ +E + YL C+ + ++ + +++LTK E L+++N P + E+
Sbjct: 44 NLRTIQFEILKYLSSQGNCEGLTKERFLDCIAIFNEFELTKAEILVILNNKPSSVPELYA 103
Query: 372 IVQESEERLSEEDVQDIISIVS 307
++ EER EED+ ++ ++
Sbjct: 104 CIEGIEERFKEEDIFKLVEKIN 125
>UniRef50_P47076 Cluster: DNA-directed RNA polymerase III subunit
RPC9; n=4; Saccharomycetaceae|Rep: DNA-directed RNA
polymerase III subunit RPC9 - Saccharomyces cerevisiae
(Baker's yeast)
Length = 161
Score = 43.6 bits (98), Expect = 0.004
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = -3
Query: 510 QDTECKNQSAQKIQKFLEAMKK---YKLTKVEKLMMVNTPPRTELEIQLIVQESEERLSE 340
+D E S + F E M K +KL K EKL +VN P + + IV+E + R E
Sbjct: 88 KDAEKSGISKMSDESFAELMTKLNSFKLFKAEKLQIVNQLPANMVHLYSIVEECDARFDE 147
Query: 339 EDVQDIISIVSQH 301
+ +++++ I+S +
Sbjct: 148 KTIEEMLEIISAY 160
>UniRef50_A3H8T8 Cluster: RNA polymerase Rpb4; n=1; Caldivirga
maquilingensis IC-167|Rep: RNA polymerase Rpb4 -
Caldivirga maquilingensis IC-167
Length = 115
Score = 43.2 bits (97), Expect = 0.005
Identities = 22/76 (28%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Frame = -3
Query: 525 TVHYLQD-TECKNQSAQKIQKFLEAMKKYKLTKVEKLMMVNTPPRTELEIQLIVQESEER 349
T+ YL+ ++ K + A+ + K E KY L ++ + +VN P T E+Q I+ +
Sbjct: 37 TLDYLRRYSKVKPEDAEALIK--ELTSKYGLARITAIQVVNIMPSTPEELQAIISVEKRP 94
Query: 348 LSEEDVQDIISIVSQH 301
EED+++I+ +++ H
Sbjct: 95 FKEEDLKEIVDLLNSH 110
>UniRef50_Q5CNZ7 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium hominis
Length = 134
Score = 40.7 bits (91), Expect = 0.028
Identities = 15/48 (31%), Positives = 32/48 (66%)
Frame = -3
Query: 447 KYKLTKVEKLMMVNTPPRTELEIQLIVQESEERLSEEDVQDIISIVSQ 304
KY L++ E + +++ P+ ++E+ I+ + E+R SEED+ I+ +V +
Sbjct: 72 KYDLSQQEVMQIIDIRPKKQVELHCIIPDCEKRFSEEDIFQILKLVGE 119
>UniRef50_Q6FSY0 Cluster: Similar to sp|P47076 Saccharomyces
cerevisiae YJL011c; n=1; Candida glabrata|Rep: Similar
to sp|P47076 Saccharomyces cerevisiae YJL011c - Candida
glabrata (Yeast) (Torulopsis glabrata)
Length = 153
Score = 39.5 bits (88), Expect = 0.064
Identities = 16/65 (24%), Positives = 38/65 (58%)
Frame = -3
Query: 492 NQSAQKIQKFLEAMKKYKLTKVEKLMMVNTPPRTELEIQLIVQESEERLSEEDVQDIISI 313
N + K + + + +Y+L + EKL +VN P + + IV+E + R ++E + ++ +
Sbjct: 89 NLNDDKFTELVMRLNQYELFQAEKLQIVNQLPVQMVHLYAIVEECDTRFTQEQIDALLQL 148
Query: 312 VSQHL 298
V++++
Sbjct: 149 VAEYV 153
>UniRef50_Q2GVZ1 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 179
Score = 37.5 bits (83), Expect = 0.26
Identities = 19/65 (29%), Positives = 37/65 (56%)
Frame = -3
Query: 471 QKFLEAMKKYKLTKVEKLMMVNTPPRTELEIQLIVQESEERLSEEDVQDIISIVSQHLLA 292
+K EA +LTK E L ++N P + + +++ EER +++ I+ I+++ +L
Sbjct: 95 EKLREANLPSELTKGELLSILNIRPSSTALLSTAIEDMEERFDDDNQNKIVDIIAE-VLG 153
Query: 291 NDSSN 277
+D SN
Sbjct: 154 SDESN 158
>UniRef50_UPI0000F20CC6 Cluster: PREDICTED: similar to
nephronophthisis 4,; n=17; Danio rerio|Rep: PREDICTED:
similar to nephronophthisis 4, - Danio rerio
Length = 909
Score = 36.3 bits (80), Expect = 0.60
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 85 CDTWCTQCIYWSPENPCQLLML*ITGSDEIRNPYAILI 198
C WC ++W PE P + + L + G D NP+A+++
Sbjct: 639 CVRWCAWSLFWDPEGPGENVCLNLQG-DSFPNPWAVMV 675
>UniRef50_A7R2M4 Cluster: Chromosome undetermined scaffold_435,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_435, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 244
Score = 35.5 bits (78), Expect = 1.0
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Frame = -3
Query: 522 VHYLQDTECKNQSAQKIQKFLEAMKKYKLTKVEKLMMVNTPPRTELEIQLIVQESEERLS 343
+ Y Q + C S Q ++ LE + KY ++ E ++ NT P T E+ +V + + S
Sbjct: 149 LQYAQSSNCY-ASPQSVRLVLEPLSKYGVSDGEICVIANTCPETIDEVFALVPSLKPKWS 207
Query: 342 --EEDVQDIISIVSQHLLANDSSN 277
E ++D++ +++ +N SSN
Sbjct: 208 TLREPLKDVLRGLAELKHSNQSSN 231
>UniRef50_Q30Q67 Cluster: Putative uncharacterized protein; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: Putative
uncharacterized protein - Thiomicrospira denitrificans
(strain ATCC 33889 / DSM 1351)
Length = 550
Score = 35.1 bits (77), Expect = 1.4
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = -3
Query: 540 TVTYETVHYLQDTECKNQSAQKIQKFLEAMKKYKLTKVEKLMMVNTP-PRTELEIQLIVQ 364
T+ E HY++ + N+ Q +QK L+ K + K+ + P +TE+E +Q
Sbjct: 425 TLKSEDKHYIRSHKVTNRFYQSVQKILDDSTKNEQVKINCIKSSFNPLNKTEIEFTEKIQ 484
Query: 363 ESEERLSEEDVQDII 319
++ +S E ++ +I
Sbjct: 485 NADGTISNETIKALI 499
>UniRef50_UPI0000498FEB Cluster: hypothetical protein 105.t00019;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 105.t00019 - Entamoeba histolytica HM-1:IMSS
Length = 133
Score = 34.7 bits (76), Expect = 1.8
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = -3
Query: 480 QKIQKFLEAMKKYKLTKVEKLMMVNTPPRTELEIQLIVQESEERLSEED---VQDIISIV 310
+++ K E +K++ T EK+++VN PP + +E +V + EE ++DI I+
Sbjct: 53 RRLLKLAEYLKQFNFTPQEKIVIVNYPPTSLVEFYSVVPNPSQFSDEEANKFMKDIEEIM 112
Query: 309 SQHLL 295
LL
Sbjct: 113 QMELL 117
>UniRef50_Q8SRV8 Cluster: DNA-DIRECTED RNA POLYMERASE II 16kDa
POLYPEPTIDE; n=1; Encephalitozoon cuniculi|Rep:
DNA-DIRECTED RNA POLYMERASE II 16kDa POLYPEPTIDE -
Encephalitozoon cuniculi
Length = 106
Score = 34.7 bits (76), Expect = 1.8
Identities = 13/42 (30%), Positives = 31/42 (73%)
Frame = -3
Query: 438 LTKVEKLMMVNTPPRTELEIQLIVQESEERLSEEDVQDIISI 313
LT+ E + +++ P++ + +QL+V++ EER ++ED+ I+++
Sbjct: 61 LTEFESIQLLDFSPKSIVCLQLVVEDMEERFTDEDLFRILNL 102
>UniRef50_A2E098 Cluster: Bromodomain containing protein; n=2;
Trichomonas vaginalis G3|Rep: Bromodomain containing
protein - Trichomonas vaginalis G3
Length = 231
Score = 34.3 bits (75), Expect = 2.4
Identities = 16/44 (36%), Positives = 29/44 (65%)
Frame = -3
Query: 408 NTPPRTELEIQLIVQESEERLSEEDVQDIISIVSQHLLANDSSN 277
NTP +E EIQ +Q SE+ S+E+ +++I I++++ D+ N
Sbjct: 153 NTPVMSEHEIQCFIQASEKLQSDEEQKEMIRILNENQPELDAGN 196
>UniRef50_Q9KEG2 Cluster: BH0890 protein; n=1; Bacillus
halodurans|Rep: BH0890 protein - Bacillus halodurans
Length = 202
Score = 33.5 bits (73), Expect = 4.2
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = -3
Query: 528 ETVHYLQDTECKNQSAQKIQKFLEAMKKYKLTKVEKLMMVNTPPRTELEIQLIVQESEER 349
E +YLQ+TE N S + IQK + A+ +L +V K+ R E+ +Q +
Sbjct: 9 ELKNYLQETEVINYSHRLIQKTIAALALDELDEVGKIKQAFLFVRDEISHSWDIQSQKVT 68
Query: 348 LSEEDV---QDIISIVSQHLLA 292
+ DV ++ I HLLA
Sbjct: 69 CAASDVLREKEGICYAKSHLLA 90
>UniRef50_A0EGG7 Cluster: Chromosome undetermined scaffold_95, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_95,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 683
Score = 33.5 bits (73), Expect = 4.2
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = -3
Query: 549 SLATVTYETVHYLQDTECKNQSAQKIQKFLEAMKKYKLTKVEKLMMVNTPPRTELEIQLI 370
SL + + HY Q + Q Q +QK +E ++K + KL + + + +L+
Sbjct: 426 SLDQLIKDINHYQQKISNQQQIIQSLQKQIEDLQKESQEQEYKLTIQQQSEKQLVNKELL 485
Query: 369 VQESEERLS-EEDVQDIISIVSQHLLANDSSN 277
Q+ EE L +E++++I V Q + + SN
Sbjct: 486 QQKDEEILKLQEEMKNIYQKVEQRMNKSVISN 517
>UniRef50_Q2QQM6 Cluster: Expressed protein; n=3; Oryza sativa|Rep:
Expressed protein - Oryza sativa subsp. japonica (Rice)
Length = 111
Score = 33.1 bits (72), Expect = 5.6
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = -3
Query: 549 SLATVTYETVHYLQDTECKNQSAQKIQKFLEAMKKYKLTKVEKLMMVNTPP 397
++A + YL T NQ+ + I +F+ + +KLT +KL ++N P
Sbjct: 35 AVAASECKVYEYLLKTPACNQTRESINEFVTRCESFKLTNADKLNVINWRP 85
>UniRef50_UPI000150A0FA Cluster: Type III restriction enzyme, res
subunit family protein; n=1; Tetrahymena thermophila
SB210|Rep: Type III restriction enzyme, res subunit
family protein - Tetrahymena thermophila SB210
Length = 2730
Score = 32.7 bits (71), Expect = 7.3
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = -3
Query: 552 ASLATVTYETVHYLQDTECKNQSAQKIQKFLEAMKKYKLTKVEKLMMVNTPPRTELEIQL 373
AS+ +YE +H L+ T KN+ K E + +K + K +++N P EIQ
Sbjct: 2375 ASVKNFSYEFLHQLRQTTQKNKEKSLSIKLEETSQSHKESMRLKQILLNYSPNNNEEIQE 2434
Query: 372 IV 367
I+
Sbjct: 2435 IL 2436
>UniRef50_Q0IHB6 Cluster: MGC154468 protein; n=1; Xenopus
laevis|Rep: MGC154468 protein - Xenopus laevis (African
clawed frog)
Length = 393
Score = 32.7 bits (71), Expect = 7.3
Identities = 22/93 (23%), Positives = 45/93 (48%)
Frame = -3
Query: 546 LATVTYETVHYLQDTECKNQSAQKIQKFLEAMKKYKLTKVEKLMMVNTPPRTELEIQLIV 367
+ +T+ET +DTE + + K E + ++K++ ++ + + +TELE L
Sbjct: 154 IRALTHETTQKNKDTEALQEQLDRFMKMNEDL-RHKMSVLQAQLKSSLQRKTELETLL-- 210
Query: 366 QESEERLSEEDVQDIISIVSQHLLANDSSNT*C 268
+ER E D S+V+ + ++ + T C
Sbjct: 211 ---QERQKENDTVSKSSVVAPGITDSNMNTTLC 240
>UniRef50_Q8SML4 Cluster: Putative uncharacterized protein; n=1;
Trebouxia aggregata|Rep: Putative uncharacterized
protein - Trebouxia aggregata
Length = 210
Score = 32.7 bits (71), Expect = 7.3
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +3
Query: 456 LLGTSEFFGHSDFCILCLVSNVQSHM*QWQVKLLSYAFYVXLSFNFLENLHNFI 617
LL T + F H++ CILC V + ++ W K + + +S E LHN I
Sbjct: 140 LLNT-QGFSHAEVCILCNVLTQKFNLSCWPHKQKQNTYQIFISGKSFETLHNCI 192
>UniRef50_Q4UCH4 Cluster: Bifunctional nuclease, putative; n=2;
Theileria|Rep: Bifunctional nuclease, putative -
Theileria annulata
Length = 391
Score = 32.7 bits (71), Expect = 7.3
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +2
Query: 98 ARNVFIG--LQKTPASCLCFRLRVLTKYAILMQYLSLFKGISLHVGLFLNRRQERLHRL 268
AR++ IG L K L L +L YAI+ + LFK L V LFL++R + +++L
Sbjct: 331 ARSINIGYYLVKISIIFLLLALVLLVYYAIVSLFKRLFKDKGLFVRLFLSKRYQPVNKL 389
>UniRef50_A2E3C1 Cluster: Zinc finger in N-recognin family protein;
n=1; Trichomonas vaginalis G3|Rep: Zinc finger in
N-recognin family protein - Trichomonas vaginalis G3
Length = 1179
Score = 32.7 bits (71), Expect = 7.3
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 37 SYKXKKELFFFIENLFCDTWCTQCIYWSPENPCQLLML*ITGSDEI 174
++K ++ EN CD C + W P+NPC L T D +
Sbjct: 80 NHKGHNVSYYVTENFICD--CGNPVNWDPDNPCSLHKKPTTNEDTL 123
>UniRef50_UPI0000E80337 Cluster: PREDICTED: hypothetical protein;
n=2; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 438
Score = 32.3 bits (70), Expect = 9.7
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = -3
Query: 513 LQDTECKNQSAQKIQKFLEAMKKYKLTKVEKLMMVNTPPRTELEIQLIVQESEERLSEED 334
L++ E Q+A++ + +A +K+K K+E L R E + + I ++ EE L+ +
Sbjct: 285 LKEKEAAEQNAERAEAAQKAFEKWKEKKIEYL---REQGRQEKQSERIRKKKEEELAAKK 341
Query: 333 VQDIISIVSQHLL 295
+D IS V + L
Sbjct: 342 KRDSISAVEKWYL 354
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 518,665,784
Number of Sequences: 1657284
Number of extensions: 9275553
Number of successful extensions: 22851
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 22179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22845
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45636850930
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -