Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14d19
(623 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061486-1|AAL29034.1| 222|Drosophila melanogaster LD45115p pro... 72 7e-13
AE014298-2497|AAF48678.1| 222|Drosophila melanogaster CG4875-PA... 72 7e-13
AE014298-2496|AAS65391.1| 238|Drosophila melanogaster CG4875-PB... 72 7e-13
AY052040-1|AAK93464.1| 641|Drosophila melanogaster LP05054p pro... 29 5.1
AE014134-711|AAF51035.2| 641|Drosophila melanogaster CG3702-PA ... 29 5.1
BT023818-1|AAZ86739.1| 909|Drosophila melanogaster SD18573p pro... 28 8.9
AY128427-1|AAM75020.1| 558|Drosophila melanogaster GH23001p pro... 28 8.9
AY061576-1|AAL29124.1| 987|Drosophila melanogaster SD02803p pro... 28 8.9
AM262815-1|CAK18655.1| 1518|Drosophila melanogaster PP1 interact... 28 8.9
AE014297-3239|AAO41591.1| 1744|Drosophila melanogaster CG7029-PA... 28 8.9
>AY061486-1|AAL29034.1| 222|Drosophila melanogaster LD45115p
protein.
Length = 222
Score = 71.7 bits (168), Expect = 7e-13
Identities = 29/83 (34%), Positives = 54/83 (65%)
Frame = -3
Query: 549 SLATVTYETVHYLQDTECKNQSAQKIQKFLEAMKKYKLTKVEKLMMVNTPPRTELEIQLI 370
+LATVTYE + YL+++ CK Q+ + I +++ + Y+L E L M+N PP + L QL+
Sbjct: 18 NLATVTYEALQYLEESPCKTQTRENIMNYVKDLSSYRLKSQEILQMINDPPTSALHTQLL 77
Query: 369 VQESEERLSEEDVQDIISIVSQH 301
+ +++ L++E+ + II + +H
Sbjct: 78 IDDNKAPLTDEENEKIIQLSYKH 100
>AE014298-2497|AAF48678.1| 222|Drosophila melanogaster CG4875-PA,
isoform A protein.
Length = 222
Score = 71.7 bits (168), Expect = 7e-13
Identities = 29/83 (34%), Positives = 54/83 (65%)
Frame = -3
Query: 549 SLATVTYETVHYLQDTECKNQSAQKIQKFLEAMKKYKLTKVEKLMMVNTPPRTELEIQLI 370
+LATVTYE + YL+++ CK Q+ + I +++ + Y+L E L M+N PP + L QL+
Sbjct: 18 NLATVTYEALQYLEESPCKTQTRENIMNYVKDLSSYRLKSQEILQMINDPPTSALHTQLL 77
Query: 369 VQESEERLSEEDVQDIISIVSQH 301
+ +++ L++E+ + II + +H
Sbjct: 78 IDDNKAPLTDEENEKIIQLSYKH 100
>AE014298-2496|AAS65391.1| 238|Drosophila melanogaster CG4875-PB,
isoform B protein.
Length = 238
Score = 71.7 bits (168), Expect = 7e-13
Identities = 29/83 (34%), Positives = 54/83 (65%)
Frame = -3
Query: 549 SLATVTYETVHYLQDTECKNQSAQKIQKFLEAMKKYKLTKVEKLMMVNTPPRTELEIQLI 370
+LATVTYE + YL+++ CK Q+ + I +++ + Y+L E L M+N PP + L QL+
Sbjct: 34 NLATVTYEALQYLEESPCKTQTRENIMNYVKDLSSYRLKSQEILQMINDPPTSALHTQLL 93
Query: 369 VQESEERLSEEDVQDIISIVSQH 301
+ +++ L++E+ + II + +H
Sbjct: 94 IDDNKAPLTDEENEKIIQLSYKH 116
>AY052040-1|AAK93464.1| 641|Drosophila melanogaster LP05054p
protein.
Length = 641
Score = 29.1 bits (62), Expect = 5.1
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 475 FLGTLIFAFCVL*VMYSLICNSGK*SFSLMLFMC-XYLLTFWRICIT 612
+LG F V +YSLI N K +S +L M YLLTF I +T
Sbjct: 478 YLGWACFPLLVAYFVYSLIYNEHKGWYSFVLNMLYGYLLTFGFILMT 524
>AE014134-711|AAF51035.2| 641|Drosophila melanogaster CG3702-PA
protein.
Length = 641
Score = 29.1 bits (62), Expect = 5.1
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 475 FLGTLIFAFCVL*VMYSLICNSGK*SFSLMLFMC-XYLLTFWRICIT 612
+LG F V +YSLI N K +S +L M YLLTF I +T
Sbjct: 478 YLGWACFPLLVAYFVYSLIYNEHKGWYSFVLNMLYGYLLTFGFILMT 524
>BT023818-1|AAZ86739.1| 909|Drosophila melanogaster SD18573p
protein.
Length = 909
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 489 QSAQKIQKFLEAMKKYKLTKVEKLMMVNTPP 397
QS K +EA + KLTK+EK + PP
Sbjct: 558 QSRSKRNSMIEAQQTQKLTKLEKRRSLQEPP 588
>AY128427-1|AAM75020.1| 558|Drosophila melanogaster GH23001p
protein.
Length = 558
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 489 QSAQKIQKFLEAMKKYKLTKVEKLMMVNTPP 397
QS K +EA + KLTK+EK + PP
Sbjct: 207 QSRSKRNSMIEAQQTQKLTKLEKRRSLQEPP 237
>AY061576-1|AAL29124.1| 987|Drosophila melanogaster SD02803p
protein.
Length = 987
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = -3
Query: 552 ASLATVTYETVHYLQDTECKNQSAQKIQKFLEAMKKYKLTKVEKLMMVNTPPRTELEIQL 373
A+ AT + + +QD E KN + + L ++K V +PP +E++ L
Sbjct: 518 AAEATASEDAEPKVQDNEVKNNEVAGESPTDQQESEATLNDLDKTKTVPSPPPSEMQSHL 577
Query: 372 IV 367
IV
Sbjct: 578 IV 579
>AM262815-1|CAK18655.1| 1518|Drosophila melanogaster PP1 interacting
16 protein.
Length = 1518
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 489 QSAQKIQKFLEAMKKYKLTKVEKLMMVNTPP 397
QS K +EA + KLTK+EK + PP
Sbjct: 1167 QSRSKRNSMIEAQQTQKLTKLEKRRSLQEPP 1197
>AE014297-3239|AAO41591.1| 1744|Drosophila melanogaster CG7029-PA
protein.
Length = 1744
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 489 QSAQKIQKFLEAMKKYKLTKVEKLMMVNTPP 397
QS K +EA + KLTK+EK + PP
Sbjct: 1393 QSRSKRNSMIEAQQTQKLTKLEKRRSLQEPP 1423
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,431,351
Number of Sequences: 53049
Number of extensions: 436678
Number of successful extensions: 962
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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