Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14d17
(691 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q06669 Cluster: Uncharacterized 15.5 kDa protein in IAP... 206 5e-52
UniRef50_Q06690 Cluster: Uncharacterized 9.4 kDa protein in IAP2... 124 3e-27
UniRef50_O10328 Cluster: Uncharacterized 14.9 kDa protein; n=5; ... 79 8e-14
UniRef50_Q0N433 Cluster: Ac75-like protein; n=1; Clanis bilineat... 60 4e-08
UniRef50_Q80LN7 Cluster: Putative uncharacterized protein; n=1; ... 52 1e-05
UniRef50_Q9YMP2 Cluster: LdOrf-85 peptide; n=16; Nucleopolyhedro... 48 2e-04
UniRef50_A0EYW2 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_Q91BF3 Cluster: Putative uncharacterized protein; n=1; ... 42 0.019
UniRef50_Q9PYS0 Cluster: ORF125; n=9; Granulovirus|Rep: ORF125 -... 37 0.53
UniRef50_Q0IL32 Cluster: ORF87; n=1; Leucania separata nuclear p... 37 0.53
UniRef50_UPI00006CFA10 Cluster: hypothetical protein TTHERM_0042... 36 0.93
UniRef50_Q7QU32 Cluster: GLP_725_33478_28370; n=1; Giardia lambl... 34 2.9
UniRef50_Q5AFT3 Cluster: Protein CFT1; n=4; Candida albicans|Rep... 34 2.9
UniRef50_Q7T9S2 Cluster: ORF_93; n=7; Granulovirus|Rep: ORF_93 -... 33 5.0
UniRef50_Q5UQ73 Cluster: Uncharacterized protein L509; n=1; Acan... 33 5.0
UniRef50_Q6BGY9 Cluster: Similar to CA3276|IPF6263 Candida albic... 33 6.6
UniRef50_Q4A5W9 Cluster: Putative uncharacterized protein; n=2; ... 33 8.7
UniRef50_A5AET3 Cluster: Putative uncharacterized protein; n=2; ... 33 8.7
>UniRef50_Q06669 Cluster: Uncharacterized 15.5 kDa protein in
IAP2-VLF1 intergenic region; n=7;
Nucleopolyhedrovirus|Rep: Uncharacterized 15.5 kDa
protein in IAP2-VLF1 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 133
Score = 206 bits (502), Expect = 5e-52
Identities = 104/134 (77%), Positives = 109/134 (81%)
Frame = -2
Query: 402 MSNLMKNFFTEXXXXXXXXXXXXXXXXXXSDWLCEQVYPDKDFSLKLKRVINMFLNDEIE 223
MSNLMKNFFTE S+WLCEQVYPDKDFSLKLKRV+NMFLN+EIE
Sbjct: 1 MSNLMKNFFTELVKSTTFTTKVSVVKTTLSNWLCEQVYPDKDFSLKLKRVVNMFLNNEIE 60
Query: 222 NDKIYKLVETVDSSNKLSRRQVDFLIHALLNNVSVTFTLHRFVDDNVLTQDELSFLANFL 43
N+KIYKLVETVDSSNKLSRRQVDFLIHALLNNVSVTFTLHRFVDDNVLTQDELSFLANFL
Sbjct: 61 NNKIYKLVETVDSSNKLSRRQVDFLIHALLNNVSVTFTLHRFVDDNVLTQDELSFLANFL 120
Query: 42 VTKXGAKHTNCPAY 1
VTK + PAY
Sbjct: 121 VTKMDEAY-QLPAY 133
>UniRef50_Q06690 Cluster: Uncharacterized 9.4 kDa protein in
IAP2-VLF1 intergenic region; n=12;
Nucleopolyhedrovirus|Rep: Uncharacterized 9.4 kDa
protein in IAP2-VLF1 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 84
Score = 124 bits (298), Expect = 3e-27
Identities = 67/85 (78%), Positives = 67/85 (78%)
Frame = -2
Query: 678 MNLYLLLGALTIFSLVYDKKENSXXXXXXXXXXXXXXXVSPAIISKNTESNVEDIPSHKA 499
MNLYLLLGAL IFSLVYDKKENS SPAIISKNTES VEDIPSHKA
Sbjct: 1 MNLYLLLGALAIFSLVYDKKENSIFLYLLILFLVFIIV-SPAIISKNTESTVEDIPSHKA 59
Query: 498 KSVRKKLEIEQALDAILNKNTSSID 424
KSVRKKLEIEQALDAILNKNTSSID
Sbjct: 60 KSVRKKLEIEQALDAILNKNTSSID 84
>UniRef50_O10328 Cluster: Uncharacterized 14.9 kDa protein; n=5;
Nucleopolyhedrovirus|Rep: Uncharacterized 14.9 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 130
Score = 79.4 bits (187), Expect = 8e-14
Identities = 36/93 (38%), Positives = 59/93 (63%)
Frame = -2
Query: 312 DWLCEQVYPDKDFSLKLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALL 133
DWL QVYPD+ FS K + V+ MF++ +++ + +Y LV T+D S L+ Q+++L A
Sbjct: 31 DWLNSQVYPDERFSAKWRGVLKMFVDGQLDEESVYCLVNTIDPSKLLTVGQINYLARAFR 90
Query: 132 NNVSVTFTLHRFVDDNVLTQDELSFLANFLVTK 34
NN + +FVD L+ D++S L+N+LV +
Sbjct: 91 NNRKMMSITQKFVDGYRLSDDDISELSNYLVAQ 123
>UniRef50_Q0N433 Cluster: Ac75-like protein; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: Ac75-like protein - Clanis
bilineata nucleopolyhedrosis virus
Length = 130
Score = 60.5 bits (140), Expect = 4e-08
Identities = 30/84 (35%), Positives = 48/84 (57%)
Frame = -2
Query: 285 DKDFSLKLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALLNNVSVTFTL 106
DK F K +V+ MF+ +I + + ++ VDS NKL+ Q+DFL + +N V L
Sbjct: 38 DKRFCDKFVKVLKMFIASQITIEDMCNIMAAVDSPNKLTADQIDFLCQQVQHNHEVMRIL 97
Query: 105 HRFVDDNVLTQDELSFLANFLVTK 34
H FVD+ + ++ LA FL+T+
Sbjct: 98 HTFVDEQHIDDQDIHELAKFLITE 121
>UniRef50_Q80LN7 Cluster: Putative uncharacterized protein; n=1;
Adoxophyes honmai NPV|Rep: Putative uncharacterized
protein - Adoxophyes honmai nucleopolyhedrovirus
Length = 129
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/79 (31%), Positives = 49/79 (62%)
Frame = -2
Query: 276 FSLKLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALLNNVSVTFTLHRF 97
F++KL +++N+FL ++IE + + L+ + D N L+ QV++L + +NN +V L F
Sbjct: 41 FTVKLVKIVNLFLQEKIEVEDLQHLLNSTDGLN-LTINQVNYLYYQAVNNNNVIHILQLF 99
Query: 96 VDDNVLTQDELSFLANFLV 40
+ LT + ++ +A F+V
Sbjct: 100 TKGHCLTDEHINDIAAFIV 118
>UniRef50_Q9YMP2 Cluster: LdOrf-85 peptide; n=16;
Nucleopolyhedrovirus|Rep: LdOrf-85 peptide - Lymantria
dispar multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 86
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = -2
Query: 543 KNTESNVEDIPSHKAKSVRKKLEIEQALDAILNKNTSSID 424
K S+ D+ + KAKS++KK ++E+A DAILNKNTSS D
Sbjct: 47 KPESSDAADLQTGKAKSIKKKRDLERAFDAILNKNTSSTD 86
>UniRef50_A0EYW2 Cluster: Putative uncharacterized protein; n=1;
Ecotropis obliqua NPV|Rep: Putative uncharacterized
protein - Ecotropis obliqua NPV
Length = 130
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/82 (24%), Positives = 48/82 (58%)
Frame = -2
Query: 285 DKDFSLKLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALLNNVSVTFTL 106
++ F+ K K ++ F++ EI D+I +++ D +L++ Q+++ ++ + + + L
Sbjct: 40 NEKFNKKFKTILQKFIDQEITLDQICTIIDAADGI-QLNKSQLNYFVNQMYLDCYLIDIL 98
Query: 105 HRFVDDNVLTQDELSFLANFLV 40
R++D N L + + ++A FLV
Sbjct: 99 QRYIDYNQLNDENVHYVAEFLV 120
>UniRef50_Q91BF3 Cluster: Putative uncharacterized protein; n=1;
Spodoptera litura NPV|Rep: Putative uncharacterized
protein - Spodoptera litura multicapsid
nucleopolyhedrovirus (SpltMNPV)
Length = 127
Score = 41.5 bits (93), Expect = 0.019
Identities = 22/82 (26%), Positives = 44/82 (53%)
Frame = -2
Query: 285 DKDFSLKLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALLNNVSVTFTL 106
D F V++MF+ ++ D + +VE VD +LS+ Q+++L + +N +
Sbjct: 38 DDSFRNTFITVLDMFVKGKVSVDSLMDVVEAVDI--ELSKSQLEYLCSRMFSNERIMSIA 95
Query: 105 HRFVDDNVLTQDELSFLANFLV 40
+ +++ L DE++ +A FLV
Sbjct: 96 NVYIERQKLNSDEVNDVAEFLV 117
>UniRef50_Q9PYS0 Cluster: ORF125; n=9; Granulovirus|Rep: ORF125 -
Xestia c-nigrum granulosis virus (XnGV) (Xestia
c-nigrumgranulovirus)
Length = 85
Score = 36.7 bits (81), Expect = 0.53
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -2
Query: 540 NTESNVEDIPSHKAKSVRKKLEIEQALDAILNKNTSSID 424
NT+S D+ + + K +KK DAILNKN SS++
Sbjct: 47 NTDSAPHDLYNEETKKAKKKKHFNDMFDAILNKNNSSLE 85
>UniRef50_Q0IL32 Cluster: ORF87; n=1; Leucania separata nuclear
polyhedrosis virus|Rep: ORF87 - Leucania separata
nuclear polyhedrosis virus (LsNPV)
Length = 140
Score = 36.7 bits (81), Expect = 0.53
Identities = 23/90 (25%), Positives = 47/90 (52%)
Frame = -2
Query: 309 WLCEQVYPDKDFSLKLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALLN 130
+L E Y D +L V +FL +I+ + + ++ E+V +L+ Q D+L + +
Sbjct: 30 YLKELAYEDT-LREQLVIVFKLFLQRKIDVESVKEVCESVGM--ELTDYQADYLRNRVYE 86
Query: 129 NVSVTFTLHRFVDDNVLTQDELSFLANFLV 40
N + + F++ L DE+++++ FLV
Sbjct: 87 NDQLISIIENFIEHQSLRPDEINYVSEFLV 116
>UniRef50_UPI00006CFA10 Cluster: hypothetical protein
TTHERM_00421090; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00421090 - Tetrahymena
thermophila SB210
Length = 480
Score = 35.9 bits (79), Expect = 0.93
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 13/91 (14%)
Frame = -2
Query: 252 INMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALLNN---VSVTFTLHR------ 100
IN F ND ++ + KL +++ K+ + ++DF + + ++ S+T +++R
Sbjct: 262 INFFKNDNFTDNSLQKLADSLAEFTKIEKLKLDFHYNTIFSDKAFYSLTSSMNRMKGIQE 321
Query: 99 ----FVDDNVLTQDELSFLANFLVTKXGAKH 19
F +N LT + L+ L+ L+TK H
Sbjct: 322 MFLNFCKNNTLTDESLANLSRVLITKQKITH 352
>UniRef50_Q7QU32 Cluster: GLP_725_33478_28370; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_725_33478_28370 - Giardia lamblia
ATCC 50803
Length = 1702
Score = 34.3 bits (75), Expect = 2.9
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = -2
Query: 141 ALLNNVSVTFTLHRFVDDNVLTQDELS 61
ALLN +S+TF + + +DDN L QD LS
Sbjct: 1120 ALLNTISLTFCIKKTLDDNALLQDFLS 1146
>UniRef50_Q5AFT3 Cluster: Protein CFT1; n=4; Candida albicans|Rep:
Protein CFT1 - Candida albicans (Yeast)
Length = 1420
Score = 34.3 bits (75), Expect = 2.9
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = -2
Query: 237 NDEIENDKIYKLVETVDSSNKLSRRQVDFLIH-ALLNN-VSVTFTL 106
ND+ + D +YK E ++ +S+ ++FL H L+NN S TFTL
Sbjct: 467 NDDDDEDDLYKEEEEEETQKTISKSHIEFLYHDELINNGPSSTFTL 512
>UniRef50_Q7T9S2 Cluster: ORF_93; n=7; Granulovirus|Rep: ORF_93 -
Adoxophyes orana granulovirus (AoGV)
Length = 154
Score = 33.5 bits (73), Expect = 5.0
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -2
Query: 267 KLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALLNNVSV 118
KL ++ MFLNDE++ +Y+L KL+ Q D+L N+ +
Sbjct: 51 KLNKIFKMFLNDELDQSMMYQL---FGDKLKLNHSQFDYLYQRTKNDAQI 97
>UniRef50_Q5UQ73 Cluster: Uncharacterized protein L509; n=1;
Acanthamoeba polyphaga mimivirus|Rep: Uncharacterized
protein L509 - Mimivirus
Length = 280
Score = 33.5 bits (73), Expect = 5.0
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Frame = -2
Query: 261 KRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALLNNVS--VTFTLHR-FVD 91
K + + L +I+N+K+ K+ T+D +NK + +D++++ L N++ + T H
Sbjct: 138 KSINDYHLIKKIDNNKLTKI--TIDDTNKWNTESIDYILNQLKNSIKPLIILTHHAPLFS 195
Query: 90 DNVL 79
DN+L
Sbjct: 196 DNIL 199
>UniRef50_Q6BGY9 Cluster: Similar to CA3276|IPF6263 Candida albicans
IPF6263; n=1; Debaryomyces hansenii|Rep: Similar to
CA3276|IPF6263 Candida albicans IPF6263 - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 864
Score = 33.1 bits (72), Expect = 6.6
Identities = 26/89 (29%), Positives = 42/89 (47%)
Frame = -2
Query: 300 EQVYPDKDFSLKLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALLNNVS 121
+Q +D LKL+ N N E EN+ + KL VD++ + ++ + N ++
Sbjct: 774 KQSLSKEDLKLKLEESFNRIYNLENENENL-KLKSLVDNTLNDNTNILNSNTNVNTNTIT 832
Query: 120 VTFTLHRFVDDNVLTQDELSFLANFLVTK 34
T T F ++N + LS L N L TK
Sbjct: 833 NTDTTEAFGNENQNNKAFLSELENTLSTK 861
>UniRef50_Q4A5W9 Cluster: Putative uncharacterized protein; n=2;
Mycoplasma synoviae 53|Rep: Putative uncharacterized
protein - Mycoplasma synoviae (strain 53)
Length = 971
Score = 32.7 bits (71), Expect = 8.7
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = -2
Query: 300 EQVYPDKDFSLKLKRVINMFLNDEIENDKIYKL-VETVDSSNKLSRRQVDFLIHALLNNV 124
+++Y DKD +K+K + LN+ I + IYKL +E + K + D +
Sbjct: 241 KEIY-DKDLYIKIKIKDYVLLNENINEENIYKLNIENYNIEQKKEAEKED-----INQFK 294
Query: 123 SVTFTLHRFVDDNVL 79
S TF L+ F+++ +L
Sbjct: 295 SKTFNLYNFINEYLL 309
>UniRef50_A5AET3 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 1108
Score = 32.7 bits (71), Expect = 8.7
Identities = 18/78 (23%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = -2
Query: 279 DFSLKLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRR-QVDFLIHALLNNVSVTFTLH 103
D++L V N F+N E+E + K+ ++++ K+ + F+ H+ +++
Sbjct: 733 DWNLHQLDVKNAFINGELEEEVYMKIPPSIETPGKIQEKYHTLFMKHSKEGEMTLFIV-- 790
Query: 102 RFVDDNVLTQDELSFLAN 49
+VDD ++T+D+ + N
Sbjct: 791 -YVDDIIITEDDEEGIGN 807
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 564,242,354
Number of Sequences: 1657284
Number of extensions: 9653453
Number of successful extensions: 26971
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 25986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26962
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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