Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14d15
(463 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P55828 Cluster: 40S ribosomal protein S20; n=28; Eukary... 173 1e-42
UniRef50_P60866 Cluster: 40S ribosomal protein S20; n=127; cellu... 163 1e-39
UniRef50_O74893 Cluster: 40S ribosomal protein S20; n=15; Fungi/... 152 3e-36
UniRef50_Q86H15 Cluster: 40S rRNA protein-like protein; n=10; Bi... 128 4e-29
UniRef50_UPI00015B60B9 Cluster: PREDICTED: similar to ENSANGP000... 121 7e-27
UniRef50_Q22DC6 Cluster: Ribosomal protein S10 containing protei... 113 1e-24
UniRef50_Q4Q8G4 Cluster: Ribosomal protein s20, putative; n=4; T... 111 5e-24
UniRef50_UPI0000498481 Cluster: 40S ribosomal protein S20; n=2; ... 111 7e-24
UniRef50_Q98S21 Cluster: 40S ribosomal protein S20; n=1; Guillar... 101 1e-20
UniRef50_A2EK65 Cluster: Ribosomal protein S10p/S20e, putative; ... 100 2e-20
UniRef50_A0BD80 Cluster: Chromosome undetermined scaffold_10, wh... 88 8e-17
UniRef50_Q5M8F0 Cluster: Putative uncharacterized protein; n=2; ... 84 2e-15
UniRef50_A0RUM5 Cluster: Ribosomal protein S10; n=3; Thermoprote... 80 2e-14
UniRef50_O29324 Cluster: 30S ribosomal protein S10P; n=35; Archa... 77 2e-13
UniRef50_A3H8H3 Cluster: Ribosomal protein S10; n=2; Thermoprote... 73 3e-12
UniRef50_UPI00015BAA87 Cluster: SSU ribosomal protein S10P; n=1;... 71 1e-11
UniRef50_P17199 Cluster: 30S ribosomal protein S10P; n=15; Archa... 68 9e-11
UniRef50_Q74MI5 Cluster: 30S ribosomal protein S10P; n=1; Nanoar... 65 8e-10
UniRef50_Q7R349 Cluster: GLP_554_44441_44061; n=1; Giardia lambl... 59 4e-08
UniRef50_Q9PLX0 Cluster: 30S ribosomal protein S10; n=15; Campyl... 53 3e-06
UniRef50_A4RTZ9 Cluster: Plastid ribosomal protein S10 small rib... 52 8e-06
UniRef50_Q4UMT0 Cluster: 30S ribosomal protein S10; n=23; Bacter... 52 8e-06
UniRef50_Q6MJ14 Cluster: 30S ribosomal protein S10; n=14; Bacter... 52 8e-06
UniRef50_Q7VQE9 Cluster: 30S ribosomal protein S10; n=10; Proteo... 51 1e-05
UniRef50_Q6MER9 Cluster: 30S ribosomal protein S10; n=7; Bacteri... 50 2e-05
UniRef50_Q2GEE0 Cluster: 30S ribosomal protein S10; n=5; Proteob... 49 6e-05
UniRef50_Q6F7R1 Cluster: 30S ribosomal protein S10; n=23; Bacter... 49 6e-05
UniRef50_Q9LK61 Cluster: 30S ribosomal protein S10, chloroplast ... 48 7e-05
UniRef50_Q88XY7 Cluster: 30S ribosomal protein S10; n=18; Bacter... 46 5e-04
UniRef50_Q8SQX6 Cluster: 40S RIBOSOMAL PROTEIN S20; n=1; Encepha... 45 0.001
UniRef50_Q7U4D0 Cluster: 30S ribosomal protein S10; n=136; cellu... 44 0.002
UniRef50_P66331 Cluster: 30S ribosomal protein S10; n=234; Bacte... 44 0.002
UniRef50_Q9TLV9 Cluster: Chloroplast 30S ribosomal protein S10; ... 42 0.007
UniRef50_O21246 Cluster: Mitochondrial ribosomal protein S10; n=... 41 0.011
UniRef50_Q8EUB2 Cluster: 30S ribosomal protein S10; n=4; Mycopla... 38 0.080
UniRef50_Q8A475 Cluster: 30S ribosomal protein S10; n=247; cellu... 37 0.19
UniRef50_Q73H86 Cluster: 30S ribosomal protein S10; n=2; Wolbach... 37 0.24
UniRef50_A0T0K7 Cluster: Chloroplast 30S ribosomal protein S10; ... 36 0.56
UniRef50_Q6YR19 Cluster: 30S ribosomal protein S10; n=5; Bacteri... 35 0.99
UniRef50_Q89ES3 Cluster: FliF protein; n=7; Rhizobiales|Rep: Fli... 34 1.3
UniRef50_Q7VVW2 Cluster: Putative exported protein; n=2; Bordete... 34 1.3
UniRef50_O50185 Cluster: 30S ribosomal protein S10; n=5; Mycopla... 34 1.7
UniRef50_A0T870 Cluster: Putative uncharacterized protein; n=2; ... 33 3.0
UniRef50_Q4N2X8 Cluster: Putative uncharacterized protein; n=2; ... 33 3.0
UniRef50_P75581 Cluster: 30S ribosomal protein S10; n=2; Mycopla... 32 5.3
UniRef50_UPI0000D99BC8 Cluster: PREDICTED: similar to 40S riboso... 32 7.0
UniRef50_Q9YMJ9 Cluster: LdOrf-128 peptide; n=1; Lymantria dispa... 32 7.0
UniRef50_A6W3N1 Cluster: Phosphate ABC transporter, inner membra... 31 9.2
UniRef50_A5ED35 Cluster: Flagellar basal body M-ring protein; n=... 31 9.2
UniRef50_A1VFC2 Cluster: Putative uncharacterized protein; n=1; ... 31 9.2
UniRef50_A7QMI1 Cluster: Chromosome chr19 scaffold_126, whole ge... 31 9.2
UniRef50_Q4QJ47 Cluster: Putative uncharacterized protein; n=3; ... 31 9.2
UniRef50_Q98PX9 Cluster: 30S ribosomal protein S10; n=7; Mollicu... 31 9.2
>UniRef50_P55828 Cluster: 40S ribosomal protein S20; n=28;
Eukaryota|Rep: 40S ribosomal protein S20 - Drosophila
melanogaster (Fruit fly)
Length = 120
Score = 173 bits (422), Expect = 1e-42
Identities = 82/96 (85%), Positives = 86/96 (89%), Gaps = 1/96 (1%)
Frame = -2
Query: 336 KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 160
KDIEKP + + +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPTK LRI
Sbjct: 6 KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65
Query: 159 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVK 52
TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK
Sbjct: 66 TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVK 101
>UniRef50_P60866 Cluster: 40S ribosomal protein S20; n=127; cellular
organisms|Rep: 40S ribosomal protein S20 - Homo sapiens
(Human)
Length = 119
Score = 163 bits (397), Expect = 1e-39
Identities = 79/96 (82%), Positives = 84/96 (87%), Gaps = 1/96 (1%)
Frame = -2
Query: 336 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 160
KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
Query: 159 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVK 52
TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK
Sbjct: 64 TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVK 99
>UniRef50_O74893 Cluster: 40S ribosomal protein S20; n=15;
Fungi/Metazoa group|Rep: 40S ribosomal protein S20 -
Schizosaccharomyces pombe (Fission yeast)
Length = 118
Score = 152 bits (369), Expect = 3e-36
Identities = 70/92 (76%), Positives = 83/92 (90%)
Frame = -2
Query: 327 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRK 148
+K Q S +HRIRITLTSRNVR+LEKVC+DL+N AK ++LRVKGPVR+PTKIL+ITTRK
Sbjct: 8 QKEQQIPSTVHRIRITLTSRNVRNLEKVCSDLVNRAKDKQLRVKGPVRLPTKILKITTRK 67
Query: 147 TPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVK 52
TP GEGSKTW+ ++MRIHKR+IDLHSPSEIVK
Sbjct: 68 TPNGEGSKTWETYEMRIHKRLIDLHSPSEIVK 99
>UniRef50_Q86H15 Cluster: 40S rRNA protein-like protein; n=10;
Bilateria|Rep: 40S rRNA protein-like protein -
Schistosoma japonicum (Blood fluke)
Length = 121
Score = 128 bits (310), Expect = 4e-29
Identities = 62/98 (63%), Positives = 76/98 (77%)
Frame = -2
Query: 354 AAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPT 175
AA+++ K + PQ +S +R+TLT+ +++ LEKV LI AK Q LRVKGPVRMPT
Sbjct: 2 AAMIAEKKADVPQ--LSTTKWVRVTLTAASIKPLEKVADGLIKKAKDQNLRVKGPVRMPT 59
Query: 174 KILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSE 61
K+LR+TTRKTPCGEGSKTWDRFQ+RIHKRVIDL S E
Sbjct: 60 KVLRVTTRKTPCGEGSKTWDRFQLRIHKRVIDLLSTDE 97
>UniRef50_UPI00015B60B9 Cluster: PREDICTED: similar to
ENSANGP00000022492; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000022492 - Nasonia
vitripennis
Length = 483
Score = 121 bits (292), Expect = 7e-27
Identities = 56/61 (91%), Positives = 58/61 (95%)
Frame = -2
Query: 234 LINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIV 55
LI KKQKL+VKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDL+SPSEIV
Sbjct: 403 LIQRGKKQKLKVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLYSPSEIV 462
Query: 54 K 52
K
Sbjct: 463 K 463
>UniRef50_Q22DC6 Cluster: Ribosomal protein S10 containing protein;
n=5; Eukaryota|Rep: Ribosomal protein S10 containing
protein - Tetrahymena thermophila SB210
Length = 120
Score = 113 bits (273), Expect = 1e-24
Identities = 52/88 (59%), Positives = 73/88 (82%), Gaps = 1/88 (1%)
Frame = -2
Query: 336 KDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKK-QKLRVKGPVRMPTKILRI 160
K+ +K + EV + R+RITLT +N++S+EK +++++ AKK +++ VKGPVRMPTK L I
Sbjct: 5 KETKKGEEEVKKV-RVRITLTCKNLKSVEKATSEIVSRAKKTEQVEVKGPVRMPTKTLVI 63
Query: 159 TTRKTPCGEGSKTWDRFQMRIHKRVIDL 76
T RK+PCGEGSKTWDRF+MRI+KR+IDL
Sbjct: 64 TVRKSPCGEGSKTWDRFEMRIYKRIIDL 91
>UniRef50_Q4Q8G4 Cluster: Ribosomal protein s20, putative; n=4;
Trypanosomatidae|Rep: Ribosomal protein s20, putative -
Leishmania major
Length = 116
Score = 111 bits (268), Expect = 5e-24
Identities = 46/92 (50%), Positives = 71/92 (77%)
Frame = -2
Query: 327 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRK 148
+K QA + +R+T+TSRN +++E V + L+ A+ +K+ + GPVR+PT+ L+ITTRK
Sbjct: 5 KKNQAAPAEGQTVRLTITSRNAKAVESVTSQLLTRARDEKVTIHGPVRLPTRTLKITTRK 64
Query: 147 TPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVK 52
TPCG G+ TWD F+++I+KR+IDLH+P+E VK
Sbjct: 65 TPCGNGTNTWDTFELKIYKRIIDLHAPTEQVK 96
>UniRef50_UPI0000498481 Cluster: 40S ribosomal protein S20; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S20 - Entamoeba histolytica HM-1:IMSS
Length = 118
Score = 111 bits (267), Expect = 7e-24
Identities = 52/95 (54%), Positives = 69/95 (72%)
Frame = -2
Query: 336 KDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRIT 157
KDI+ P I IT+TS V+++E +CA++ KK+ ++VKGPVR+PTK LRIT
Sbjct: 6 KDIKAPVTP-KVYKNITITITSTKVKAVESLCAEVKENGKKKGVQVKGPVRIPTKTLRIT 64
Query: 156 TRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVK 52
TRKTPCGEGSKTWD +QMRI+KRV+ + + E VK
Sbjct: 65 TRKTPCGEGSKTWDHYQMRIYKRVLSMKTTPETVK 99
>UniRef50_Q98S21 Cluster: 40S ribosomal protein S20; n=1; Guillardia
theta|Rep: 40S ribosomal protein S20 - Guillardia theta
(Cryptomonas phi)
Length = 116
Score = 101 bits (241), Expect = 1e-20
Identities = 39/74 (52%), Positives = 58/74 (78%)
Frame = -2
Query: 291 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 112
+RITLTS+++ SLEK C ++I K+ ++GP+R+PTK + + RK+PCGEG+ TWD+
Sbjct: 16 LRITLTSKHLISLEKACKEIIEKNKENNYHIRGPIRIPTKKINLNVRKSPCGEGTNTWDK 75
Query: 111 FQMRIHKRVIDLHS 70
F+M+IHKR+ID HS
Sbjct: 76 FEMKIHKRIIDFHS 89
>UniRef50_A2EK65 Cluster: Ribosomal protein S10p/S20e, putative;
n=3; Trichomonas vaginalis G3|Rep: Ribosomal protein
S10p/S20e, putative - Trichomonas vaginalis G3
Length = 123
Score = 100 bits (239), Expect = 2e-20
Identities = 47/103 (45%), Positives = 69/103 (66%)
Frame = -2
Query: 360 MAAAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRM 181
MA VV D +K E P+ +IR+T+TS + +L++V +L+ KK L V+GP+ M
Sbjct: 1 MADRVVPTGDEKKEIVEDLPVQKIRLTITSSKLPNLQRVVGNLMGKLKKGNLEVRGPIPM 60
Query: 180 PTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVK 52
P + LRITTR+ PCG G++T+D F++RI+KRVID +E VK
Sbjct: 61 PRRRLRITTRRAPCGNGTETYDHFELRIYKRVIDFQGTAEAVK 103
>UniRef50_A0BD80 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_10,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 123
Score = 88.2 bits (209), Expect = 8e-17
Identities = 46/89 (51%), Positives = 59/89 (66%), Gaps = 6/89 (6%)
Frame = -2
Query: 327 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAK----KQKLRV--KGPVRMPTKIL 166
EK + +IR+ +TSR+ + LE +I + Q +V KGPVRMPTK L
Sbjct: 6 EKKVEDEQQTKKIRMIVTSRSAQDLENFTNQVIEKTRGIQRDQGAQVVFKGPVRMPTKHL 65
Query: 165 RITTRKTPCGEGSKTWDRFQMRIHKRVID 79
++T RK+PCGEGSKTWDRF+MRIHKRVID
Sbjct: 66 KMTVRKSPCGEGSKTWDRFEMRIHKRVID 94
>UniRef50_Q5M8F0 Cluster: Putative uncharacterized protein; n=2;
Tetrapoda|Rep: Putative uncharacterized protein -
Xenopus tropicalis (Western clawed frog) (Silurana
tropicalis)
Length = 82
Score = 83.8 bits (198), Expect = 2e-15
Identities = 47/82 (57%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Frame = -2
Query: 336 KDIEK-PQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 160
KD K P + IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK+ ++
Sbjct: 4 KDAGKAPVDQEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKV-QL 62
Query: 159 TTRKTPCGEGSKTWD-RFQMRI 97
+ + C + W+ +FQ RI
Sbjct: 63 ESYISQC--AAVCWESKFQHRI 82
>UniRef50_A0RUM5 Cluster: Ribosomal protein S10; n=3;
Thermoprotei|Rep: Ribosomal protein S10 - Cenarchaeum
symbiosum
Length = 102
Score = 80.2 bits (189), Expect = 2e-14
Identities = 31/79 (39%), Positives = 57/79 (72%)
Frame = -2
Query: 288 RITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRF 109
R+ LTS N+ L+ VC +++ K+ +R+KGP +P K L I TRK+PCG G++T++++
Sbjct: 6 RVKLTSINLLKLDGVCGIIMDIGKRTGVRIKGPTPLPVKKLHIATRKSPCGSGTETYEKW 65
Query: 108 QMRIHKRVIDLHSPSEIVK 52
+MR+H+R+ID+ + + ++
Sbjct: 66 EMRMHRRIIDISADDKTIR 84
>UniRef50_O29324 Cluster: 30S ribosomal protein S10P; n=35;
Archaea|Rep: 30S ribosomal protein S10P - Archaeoglobus
fulgidus
Length = 106
Score = 76.6 bits (180), Expect = 2e-13
Identities = 31/81 (38%), Positives = 53/81 (65%)
Frame = -2
Query: 294 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 115
+ RI L+ N R L+++C+ + A K + + GPV +PT+ + + RK P GEGS+TWD
Sbjct: 7 KARIKLSGLNPRELDRICSQIKEIANKTGVELSGPVPLPTRRMVVPVRKAPDGEGSETWD 66
Query: 114 RFQMRIHKRVIDLHSPSEIVK 52
++MR+HKR+ID+ + ++
Sbjct: 67 HWEMRVHKRLIDISADERALR 87
>UniRef50_A3H8H3 Cluster: Ribosomal protein S10; n=2;
Thermoproteales|Rep: Ribosomal protein S10 - Caldivirga
maquilingensis IC-167
Length = 121
Score = 72.9 bits (171), Expect = 3e-12
Identities = 32/85 (37%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = -2
Query: 303 PIHRI-RITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGS 127
P+ RI RI + N S++ + D+ AKK ++V+GP+ +PT+ L +T R+ P G+G
Sbjct: 18 PVPRIVRIRIWGTNTDSVDGLARDITGIAKKLGIKVRGPIPLPTRRLMVTVRRAPSGQGY 77
Query: 126 KTWDRFQMRIHKRVIDLHSPSEIVK 52
T+D ++MRIHKRV+D+ + ++
Sbjct: 78 HTYDHWEMRIHKRVVDMDADERALR 102
>UniRef50_UPI00015BAA87 Cluster: SSU ribosomal protein S10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S10P - Ignicoccus hospitalis KIN4/I
Length = 106
Score = 70.9 bits (166), Expect = 1e-11
Identities = 32/84 (38%), Positives = 56/84 (66%)
Frame = -2
Query: 303 PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSK 124
P + RI + S +V+S+E+V + A++ + V+GPV +P K L I+T + P GEG+K
Sbjct: 3 PKNMARIKMWSTDVKSIEEVAKQIREIAERSGVEVRGPVPLPVKRLEISTLRLPHGEGTK 62
Query: 123 TWDRFQMRIHKRVIDLHSPSEIVK 52
+D ++MRIHKR+ID+ ++++
Sbjct: 63 VFDHWEMRIHKRLIDVELNDKVMR 86
>UniRef50_P17199 Cluster: 30S ribosomal protein S10P; n=15;
Archaea|Rep: 30S ribosomal protein S10P - Sulfolobus
acidocaldarius
Length = 102
Score = 68.1 bits (159), Expect = 9e-11
Identities = 28/81 (34%), Positives = 50/81 (61%)
Frame = -2
Query: 294 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 115
+ RI L S N+ SL V + N A+K ++V GP+ +PT + + + P GEG K W+
Sbjct: 4 KARIRLWSSNIDSLNFVVNQIRNMAQKTGIQVSGPIPLPTTRMEVPVMRLPHGEGKKKWE 63
Query: 114 RFQMRIHKRVIDLHSPSEIVK 52
++M++HKR+ID+ + +++
Sbjct: 64 HWEMKVHKRIIDIAADERVMR 84
>UniRef50_Q74MI5 Cluster: 30S ribosomal protein S10P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S10P -
Nanoarchaeum equitans
Length = 109
Score = 64.9 bits (151), Expect = 8e-10
Identities = 27/80 (33%), Positives = 49/80 (61%)
Frame = -2
Query: 291 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 112
+RI + S ++ L +V + K+ ++++GP+ +PTKILR+ + G+K WD
Sbjct: 4 LRIKIYSTDLEELNRVVEKIKEIVKQTGVKMRGPIPLPTKILRVPVLRITGHRGTKIWDT 63
Query: 111 FQMRIHKRVIDLHSPSEIVK 52
+QMRIH+R+ID+ + +K
Sbjct: 64 YQMRIHRRIIDIATDDRTIK 83
>UniRef50_Q7R349 Cluster: GLP_554_44441_44061; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_554_44441_44061 - Giardia lamblia
ATCC 50803
Length = 126
Score = 59.3 bits (137), Expect = 4e-08
Identities = 24/66 (36%), Positives = 42/66 (63%)
Frame = -2
Query: 285 ITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQ 106
I + ++++ +E+ ++ + + GP R P + L ITTRK+PCGEG+ TW RF+
Sbjct: 27 IIVVGKDLKLVERYVKSIVKEGRA--FGISGPCRAPVRRLTITTRKSPCGEGTNTWHRFE 84
Query: 105 MRIHKR 88
+R++KR
Sbjct: 85 LRMYKR 90
>UniRef50_Q9PLX0 Cluster: 30S ribosomal protein S10; n=15;
Campylobacter|Rep: 30S ribosomal protein S10 -
Campylobacter jejuni
Length = 103
Score = 53.2 bits (122), Expect = 3e-06
Identities = 25/75 (33%), Positives = 46/75 (61%)
Frame = -2
Query: 300 IHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKT 121
+ RIR+ L + + R L++ A ++ K+ ++GP+ MPTKI R T K+P +
Sbjct: 1 MERIRLKLKAYDHRVLDRTVAAIVEAVKRTGADIRGPIPMPTKIKRYTVLKSP-HINKDS 59
Query: 120 WDRFQMRIHKRVIDL 76
++F++RIH R++D+
Sbjct: 60 REQFEIRIHARMLDI 74
>UniRef50_A4RTZ9 Cluster: Plastid ribosomal protein S10 small
ribosomal subunit; n=1; Ostreococcus lucimarinus
CCE9901|Rep: Plastid ribosomal protein S10 small
ribosomal subunit - Ostreococcus lucimarinus CCE9901
Length = 136
Score = 51.6 bits (118), Expect = 8e-06
Identities = 27/85 (31%), Positives = 42/85 (49%)
Frame = -2
Query: 318 QAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPC 139
QA +IRI L S ++ C ++ AK + RV GPV +PTK ++P
Sbjct: 31 QAAAVQASKIRIRLRSFETNHMQSACDKILEAAKATEARVSGPVPLPTKRRIFCVLRSP- 89
Query: 138 GEGSKTWDRFQMRIHKRVIDLHSPS 64
+ + F+ R H R+ID+H P+
Sbjct: 90 HVNKDSREHFETRTHHRLIDVHQPT 114
>UniRef50_Q4UMT0 Cluster: 30S ribosomal protein S10; n=23;
Bacteria|Rep: 30S ribosomal protein S10 - Rickettsia
felis (Rickettsia azadi)
Length = 105
Score = 51.6 bits (118), Expect = 8e-06
Identities = 24/81 (29%), Positives = 49/81 (60%)
Frame = -2
Query: 297 HRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTW 118
++I+I L S + RSL++ ++++ K+ + GP+ +P KI R T ++P K+
Sbjct: 3 NKIKIRLKSFDHRSLDQATKEIVSAVKRTFANINGPIPLPRKIERFTVNRSP-HVHKKSR 61
Query: 117 DRFQMRIHKRVIDLHSPSEIV 55
++F++R HKR++ + P+ V
Sbjct: 62 EQFEIRKHKRLLVIDDPNPAV 82
>UniRef50_Q6MJ14 Cluster: 30S ribosomal protein S10; n=14;
Bacteria|Rep: 30S ribosomal protein S10 - Bdellovibrio
bacteriovorus
Length = 105
Score = 51.6 bits (118), Expect = 8e-06
Identities = 23/78 (29%), Positives = 51/78 (65%)
Frame = -2
Query: 294 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 115
+IRI L + + + L++ +++ A++ +V GP+ +PT+I R T ++P + K+ +
Sbjct: 5 KIRIRLKAFDHKLLDQSTKEIVETARRTGAKVAGPIPLPTRINRYTVLRSPHVD-KKSRE 63
Query: 114 RFQMRIHKRVIDLHSPSE 61
+F++R HKR++D+ P++
Sbjct: 64 QFEVRTHKRMLDILEPTQ 81
>UniRef50_Q7VQE9 Cluster: 30S ribosomal protein S10; n=10;
Proteobacteria|Rep: 30S ribosomal protein S10 -
Blochmannia floridanus
Length = 103
Score = 51.2 bits (117), Expect = 1e-05
Identities = 26/78 (33%), Positives = 46/78 (58%)
Frame = -2
Query: 294 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 115
RIRI L + + R +++ D++ AK+ +V GP+ +PTK R T +P D
Sbjct: 5 RIRIRLKAFDHRLIDRSTLDIVETAKRTGAQVHGPIPLPTKKERFTILVSP-HVNKDARD 63
Query: 114 RFQMRIHKRVIDLHSPSE 61
++++R HKR+ID+ P++
Sbjct: 64 QYEIRTHKRLIDIVDPTD 81
>UniRef50_Q6MER9 Cluster: 30S ribosomal protein S10; n=7;
Bacteria|Rep: 30S ribosomal protein S10 - Protochlamydia
amoebophila (strain UWE25)
Length = 111
Score = 50.4 bits (115), Expect = 2e-05
Identities = 23/77 (29%), Positives = 46/77 (59%)
Frame = -2
Query: 294 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 115
+IRI L + R L++ D++ AK+ + GP+ +PT + T ++P K+ +
Sbjct: 14 KIRIRLKGYDQRLLDRSTGDIVETAKRTGAAIAGPIPLPTSCEKFTVLRSP-NIDRKSRE 72
Query: 114 RFQMRIHKRVIDLHSPS 64
+F++R H+R+ID+ +P+
Sbjct: 73 QFEIRTHRRLIDILNPT 89
>UniRef50_Q2GEE0 Cluster: 30S ribosomal protein S10; n=5;
Proteobacteria|Rep: 30S ribosomal protein S10 -
Neorickettsia sennetsu (strain Miyayama)
Length = 103
Score = 48.8 bits (111), Expect = 6e-05
Identities = 24/75 (32%), Positives = 45/75 (60%)
Frame = -2
Query: 294 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 115
+IRI L S + L + +++ AK+ V GP+ +PT++ R T K+P + K+ +
Sbjct: 3 KIRIKLKSFDSGILHRSTKEIVMAAKRNGALVSGPIPLPTRVSRYTVNKSPHVD-KKSRE 61
Query: 114 RFQMRIHKRVIDLHS 70
+FQ+ +HK +++L S
Sbjct: 62 QFQLAVHKCLLELSS 76
>UniRef50_Q6F7R1 Cluster: 30S ribosomal protein S10; n=23;
Bacteria|Rep: 30S ribosomal protein S10 - Acinetobacter
sp. (strain ADP1)
Length = 103
Score = 48.8 bits (111), Expect = 6e-05
Identities = 25/78 (32%), Positives = 46/78 (58%)
Frame = -2
Query: 294 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 115
RIRI L S + R +++ +++ AK+ +V GP+ MPT+I R +P D
Sbjct: 5 RIRIRLKSFDHRLIDQSSQEIVETAKRTGAQVCGPIPMPTRIERFNVLTSP-HVNKDARD 63
Query: 114 RFQMRIHKRVIDLHSPSE 61
++++R +KR+ID+ P++
Sbjct: 64 QYEIRTYKRLIDIVQPTD 81
>UniRef50_Q9LK61 Cluster: 30S ribosomal protein S10, chloroplast
precursor; n=33; cellular organisms|Rep: 30S ribosomal
protein S10, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 191
Score = 48.4 bits (110), Expect = 7e-05
Identities = 29/98 (29%), Positives = 49/98 (50%)
Frame = -2
Query: 357 AAAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 178
A+ V S I +++P +IRI L S V +E C +++ A+ + GPV +P
Sbjct: 73 ASEVPSSSSISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLP 132
Query: 177 TKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPS 64
TK K+P + F++R H+R+ID+ P+
Sbjct: 133 TKKRIYCVLKSPHVHKDARF-HFEIRTHQRMIDILYPT 169
>UniRef50_Q88XY7 Cluster: 30S ribosomal protein S10; n=18;
Bacteria|Rep: 30S ribosomal protein S10 - Lactobacillus
plantarum
Length = 102
Score = 45.6 bits (103), Expect = 5e-04
Identities = 23/77 (29%), Positives = 45/77 (58%)
Frame = -2
Query: 294 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 115
+IRI L + R L++ ++ AK+ + GP+ +PT+ T ++P + + +
Sbjct: 5 KIRIRLKAYEHRILDQSADKIVETAKRTGATISGPIPLPTERTIYTVLRSP-HKFKDSRE 63
Query: 114 RFQMRIHKRVIDLHSPS 64
+F+MR HKR+ID+ +P+
Sbjct: 64 QFEMRTHKRLIDIVNPT 80
>UniRef50_Q8SQX6 Cluster: 40S RIBOSOMAL PROTEIN S20; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S20
- Encephalitozoon cuniculi
Length = 120
Score = 44.8 bits (101), Expect = 0.001
Identities = 20/69 (28%), Positives = 36/69 (52%)
Frame = -2
Query: 294 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 115
++ I + S + + KVC + K ++ +P K+ ITT + P G+G+K W
Sbjct: 20 KVCIDMASLEEKQINKVCREFYEYGKTFIDDLQRETVLPKKVESITTLRNPSGQGTKKWS 79
Query: 114 RFQMRIHKR 88
R++M +H R
Sbjct: 80 RYKMIVHLR 88
>UniRef50_Q7U4D0 Cluster: 30S ribosomal protein S10; n=136; cellular
organisms|Rep: 30S ribosomal protein S10 - Synechococcus
sp. (strain WH8102)
Length = 106
Score = 44.0 bits (99), Expect = 0.002
Identities = 24/77 (31%), Positives = 41/77 (53%)
Frame = -2
Query: 294 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 115
+IRI L + + R L+ C +I A + GP+ +PTK ++P + +
Sbjct: 9 KIRIRLKAFDRRMLDLSCDKIIETADQTAATAIGPIPLPTKRKIYCVLRSPHVDKDSR-E 67
Query: 114 RFQMRIHKRVIDLHSPS 64
F+ R H+R+ID++SPS
Sbjct: 68 HFETRTHRRIIDIYSPS 84
>UniRef50_P66331 Cluster: 30S ribosomal protein S10; n=234;
Bacteria|Rep: 30S ribosomal protein S10 - Listeria
innocua
Length = 102
Score = 43.6 bits (98), Expect = 0.002
Identities = 24/77 (31%), Positives = 44/77 (57%)
Frame = -2
Query: 294 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 115
+IRI L + + R L++ ++ AK+ V GP+ +PT+ I T + + +
Sbjct: 5 KIRIRLKAYDHRILDQSAEKIVETAKRSGASVSGPIPLPTE-KSIYTVLRAVHKYKDSRE 63
Query: 114 RFQMRIHKRVIDLHSPS 64
+F+MR HKR+ID+ +P+
Sbjct: 64 QFEMRTHKRLIDIVNPT 80
>UniRef50_Q9TLV9 Cluster: Chloroplast 30S ribosomal protein S10;
n=1; Cyanidium caldarium|Rep: Chloroplast 30S ribosomal
protein S10 - Cyanidium caldarium
Length = 109
Score = 41.9 bits (94), Expect = 0.007
Identities = 23/77 (29%), Positives = 41/77 (53%)
Frame = -2
Query: 294 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 115
++RI L+S + L C +++ K+ VKGPV +PT+ ++P + +
Sbjct: 12 KVRIKLSSYSASLLNLSCNNVLQSIKESNTSVKGPVFLPTRRRVYCVLRSP-HVNKDSRE 70
Query: 114 RFQMRIHKRVIDLHSPS 64
F++R H R+ID+ S S
Sbjct: 71 HFEIRSHFRIIDISSCS 87
>UniRef50_O21246 Cluster: Mitochondrial ribosomal protein S10; n=1;
Reclinomonas americana|Rep: Mitochondrial ribosomal
protein S10 - Reclinomonas americana
Length = 116
Score = 41.1 bits (92), Expect = 0.011
Identities = 23/78 (29%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = -2
Query: 300 IHRIRITLTSRNVRSLEKVCADLI-NGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSK 124
I + + L S ++ L+ CA ++ N Q L++ GP+ +PTKI +IT ++P + K
Sbjct: 3 ITKCSLHLKSFDLDVLKDSCALILKNKINLQNLKLTGPINLPTKIKKITVLRSPHID-KK 61
Query: 123 TWDRFQMRIHKRVIDLHS 70
+ ++F++R + + I + S
Sbjct: 62 SREQFEIRTYTKTIQIES 79
>UniRef50_Q8EUB2 Cluster: 30S ribosomal protein S10; n=4;
Mycoplasma|Rep: 30S ribosomal protein S10 - Mycoplasma
penetrans
Length = 102
Score = 38.3 bits (85), Expect = 0.080
Identities = 23/82 (28%), Positives = 45/82 (54%)
Frame = -2
Query: 297 HRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTW 118
+ ++I L S + R L++ +I ++ +VKGP+ +PTK T ++P +
Sbjct: 3 NEMKIKLFSYDHRLLDQSVRKIIKSSQDSGAKVKGPIPLPTKKEIFTICRSP-HVNKTSR 61
Query: 117 DRFQMRIHKRVIDLHSPSEIVK 52
++F+ R H+R+I L + +E K
Sbjct: 62 EQFERRTHQRLIILLNTTEKTK 83
>UniRef50_Q8A475 Cluster: 30S ribosomal protein S10; n=247; cellular
organisms|Rep: 30S ribosomal protein S10 - Bacteroides
thetaiotaomicron
Length = 101
Score = 37.1 bits (82), Expect = 0.19
Identities = 22/75 (29%), Positives = 39/75 (52%)
Frame = -2
Query: 294 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 115
+IRI L S + ++K ++ K V GP+ +PT RI T K+ +
Sbjct: 4 KIRIKLKSYDHNLVDKSAEKIVRTVKATGAIVSGPIPLPTH-KRIFTVNRSTFVNKKSRE 62
Query: 114 RFQMRIHKRVIDLHS 70
+F++ +KR+ID++S
Sbjct: 63 QFELSSYKRLIDIYS 77
>UniRef50_Q73H86 Cluster: 30S ribosomal protein S10; n=2;
Wolbachia|Rep: 30S ribosomal protein S10 - Wolbachia
pipientis wMel
Length = 109
Score = 36.7 bits (81), Expect = 0.24
Identities = 19/73 (26%), Positives = 39/73 (53%)
Frame = -2
Query: 291 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 112
I I + + + LE+ I+ K+ ++ GP+ +P K + ++P + K+ ++
Sbjct: 5 IYINIKAFDCSLLEECVRKFIDELKRSSAKLSGPIALPRKDSKFIVNRSPHVD-KKSREQ 63
Query: 111 FQMRIHKRVIDLH 73
F+MR +R+I LH
Sbjct: 64 FEMRTSRRLIVLH 76
>UniRef50_A0T0K7 Cluster: Chloroplast 30S ribosomal protein S10;
n=3; Bacillariophyta|Rep: Chloroplast 30S ribosomal
protein S10 - Phaeodactylum tricornutum
Length = 107
Score = 35.5 bits (78), Expect = 0.56
Identities = 19/79 (24%), Positives = 39/79 (49%)
Frame = -2
Query: 294 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 115
+IR+ L S N L C ++N + G + +PT+ ++P + +
Sbjct: 8 KIRVRLESFNHELLNSSCQKIVNILQNTLSNSIGVITLPTRKRIYCVLRSPHVDKDSR-E 66
Query: 114 RFQMRIHKRVIDLHSPSEI 58
F++R HKR+++++ SE+
Sbjct: 67 HFEIRTHKRILEIYYNSEV 85
>UniRef50_Q6YR19 Cluster: 30S ribosomal protein S10; n=5;
Bacteria|Rep: 30S ribosomal protein S10 - Onion yellows
phytoplasma
Length = 107
Score = 34.7 bits (76), Expect = 0.99
Identities = 18/77 (23%), Positives = 42/77 (54%)
Frame = -2
Query: 291 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 112
I+I L + + +++ +I+ K ++GP+ +PT+ T ++P + ++
Sbjct: 9 IKIILRAYDHHLIDQSAKKIIDILTKTGANIEGPIPLPTRKEVFTVLRSPF-VNKDSREQ 67
Query: 111 FQMRIHKRVIDLHSPSE 61
F+ R HKR+I + +P++
Sbjct: 68 FERRTHKRLIQIINPNK 84
>UniRef50_Q89ES3 Cluster: FliF protein; n=7; Rhizobiales|Rep: FliF
protein - Bradyrhizobium japonicum
Length = 519
Score = 34.3 bits (75), Expect = 1.3
Identities = 21/86 (24%), Positives = 41/86 (47%)
Frame = -2
Query: 327 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRK 148
E P+ S + R+R L ++ +R++ + A +NG K Q++ + T +
Sbjct: 142 EAPEPSASIVVRVRGALEAQQIRAIRHLVASAVNGLKPQRVSIVDEAGQLLADGAATDPE 201
Query: 147 TPCGEGSKTWDRFQMRIHKRVIDLHS 70
G+ +T F+ R+ K+V D+ S
Sbjct: 202 QALGDERRT--TFEKRMRKQVEDIVS 225
>UniRef50_Q7VVW2 Cluster: Putative exported protein; n=2;
Bordetella|Rep: Putative exported protein - Bordetella
pertussis
Length = 317
Score = 34.3 bits (75), Expect = 1.3
Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Frame = -2
Query: 300 IHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTP--CGEGS 127
IH +T ++ VC +L+ A K K+ P +L +T + CGE +
Sbjct: 142 IHTSTQGITYATAYGMQTVCGELLGKAAKGKVLGIPYKSTPPAVLDVTAGRVAFACGETA 201
Query: 126 KTWDRFQMRIHKRVIDLHSPSEIVKPGSPSINHSXP 19
T Q R + + ++ PG PS+ S P
Sbjct: 202 TTLSALQGRTLRALAVINPGGSKYIPGVPSVQESLP 237
>UniRef50_O50185 Cluster: 30S ribosomal protein S10; n=5; Mycoplasma
hyopneumoniae|Rep: 30S ribosomal protein S10 -
Mycoplasma hyopneumoniae (strain 232)
Length = 106
Score = 33.9 bits (74), Expect = 1.7
Identities = 21/72 (29%), Positives = 37/72 (51%)
Frame = -2
Query: 291 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 112
I+I L S + R ++ +I A++ + +GPV +PT I T K+ ++
Sbjct: 6 IKIKLKSFDHRQIDAAAKKIILLARELNIETRGPVPLPTS-RAIYTILRSVHINKKSREQ 64
Query: 111 FQMRIHKRVIDL 76
F+ R HKR++ L
Sbjct: 65 FESRTHKRLVIL 76
>UniRef50_A0T870 Cluster: Putative uncharacterized protein; n=2;
Burkholderia ambifaria|Rep: Putative uncharacterized
protein - Burkholderia ambifaria MC40-6
Length = 325
Score = 33.1 bits (72), Expect = 3.0
Identities = 22/52 (42%), Positives = 29/52 (55%)
Frame = -3
Query: 395 KLFISAGIQQATWQPL*CQAKTSRNPRQRSPLFTASGSLLLLAMCAHSRRSV 240
+ FI+AGI TWQPL T+R P + F+ G+L LLA A R S+
Sbjct: 231 RTFIAAGIHPETWQPL----ATARRPAMIA--FSIIGALGLLAFWAWGRMSL 276
>UniRef50_Q4N2X8 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria parva
Length = 1371
Score = 33.1 bits (72), Expect = 3.0
Identities = 17/87 (19%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = -2
Query: 267 NVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKR 88
NV+S+E++CA+++N KQ P + ++ + +++ + D+ +++ +
Sbjct: 1184 NVKSVEQLCANILNSIPKQSKSTSKPTKSISEFFKPSSK---VDKPDSKLDKTSLQLPEL 1240
Query: 87 VIDLHSP-SEIVKPGSPSINHSXPRCR 10
++H P ++ KP S + + R +
Sbjct: 1241 GTEVHKPTAQQTKPSSKHLKNKRKRMK 1267
>UniRef50_P75581 Cluster: 30S ribosomal protein S10; n=2;
Mycoplasma|Rep: 30S ribosomal protein S10 - Mycoplasma
pneumoniae
Length = 108
Score = 32.3 bits (70), Expect = 5.3
Identities = 19/72 (26%), Positives = 39/72 (54%)
Frame = -2
Query: 291 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 112
++I L S + L+ ++ K +++KGP+ +PTK IT ++P + + ++
Sbjct: 12 LKIKLESYDSTLLDLTTKKIVEVVKGVDVKIKGPLPLPTKKEVITIIRSPHVDKASR-EQ 70
Query: 111 FQMRIHKRVIDL 76
F+ HKR++ L
Sbjct: 71 FEKNRHKRLMIL 82
>UniRef50_UPI0000D99BC8 Cluster: PREDICTED: similar to 40S ribosomal
protein S20; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S20 - Macaca mulatta
Length = 71
Score = 31.9 bits (69), Expect = 7.0
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = -2
Query: 108 QMRIHKRVIDLHSPSEIVK 52
+M+IH ++IDL SPSEIVK
Sbjct: 33 KMKIHNQLIDLQSPSEIVK 51
Score = 31.5 bits (68), Expect = 9.2
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = -2
Query: 336 KDIEKPQAEVSPIHRIRITLTSRNVRSLEKV 244
KD + IH+IRITL S NV+SLEK+
Sbjct: 4 KDRKNTHGAGGGIHQIRITLISCNVKSLEKM 34
>UniRef50_Q9YMJ9 Cluster: LdOrf-128 peptide; n=1; Lymantria dispar
MNPV|Rep: LdOrf-128 peptide - Lymantria dispar
multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 226
Score = 31.9 bits (69), Expect = 7.0
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -2
Query: 186 RMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRV 85
R+P ++ + +TPC S W+R ++R+H RV
Sbjct: 8 RLPLRVY-VDEAETPCWRASADWERGELRLHYRV 40
>UniRef50_A6W3N1 Cluster: Phosphate ABC transporter, inner membrane
subunit PstA; n=61; Gammaproteobacteria|Rep: Phosphate
ABC transporter, inner membrane subunit PstA -
Marinomonas sp. MWYL1
Length = 570
Score = 31.5 bits (68), Expect = 9.2
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = -2
Query: 189 VRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKPGSPSINHSXPRCR 10
V+ KI+ TT TP TW+ F+ I + + EI K IN++ R R
Sbjct: 153 VKEDGKIVSETTDLTPTDSAMATWNAFEKSIERAAVLFDEIHEIEKKDIGKINYALERIR 212
>UniRef50_A5ED35 Cluster: Flagellar basal body M-ring protein; n=4;
Alphaproteobacteria|Rep: Flagellar basal body M-ring
protein - Bradyrhizobium sp. (strain BTAi1 / ATCC
BAA-1182)
Length = 535
Score = 31.5 bits (68), Expect = 9.2
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = -2
Query: 327 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRK 148
E P+ S + R+R L + +R++ + A +NG K Q++ + V ++L T+
Sbjct: 160 ETPEPSASIVVRVRGALDAAQIRAIRHLVASAVNGLKPQRVSI---VDEAGQLLADGTQT 216
Query: 147 TPCGE-GSKTWDRFQMRIHKRVIDLHS 70
+ G + + F+ R+ K+V D+ S
Sbjct: 217 DIDQQVGDERRNTFEKRMRKQVEDIVS 243
>UniRef50_A1VFC2 Cluster: Putative uncharacterized protein; n=1;
Desulfovibrio vulgaris subsp. vulgaris DP4|Rep: Putative
uncharacterized protein - Desulfovibrio vulgaris subsp.
vulgaris (strain DP4)
Length = 419
Score = 31.5 bits (68), Expect = 9.2
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -2
Query: 114 RFQMRIHKRVIDLHSPSEIVKPGSPSINHS 25
RF+ RIH+RV LH I+ PG P ++HS
Sbjct: 335 RFEGRIHERVTGLHG-GFILLPGHPILHHS 363
>UniRef50_A7QMI1 Cluster: Chromosome chr19 scaffold_126, whole
genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr19 scaffold_126, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 215
Score = 31.5 bits (68), Expect = 9.2
Identities = 23/58 (39%), Positives = 31/58 (53%)
Frame = +2
Query: 188 TGPFTRSFCFLAPLIRSAQTFSSERTLREVRVILMR*IGETSAWGFSMSLPDTTAAAM 361
TG RSF LA RSAQ+F +E T RE+ L+ S+ GF++ + T A M
Sbjct: 107 TGGTPRSFTTLA---RSAQSFGNETTRREIHASLLM---ACSSAGFTLLVTGLTLARM 158
>UniRef50_Q4QJ47 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 1024
Score = 31.5 bits (68), Expect = 9.2
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -1
Query: 367 KQHGSRCSVRQRHRETPGRGLPYSPHQDHSYFSQCALTREGLC 239
++HG R ++R T RG YS H D S + + +T G C
Sbjct: 906 RRHGGRGQAQRRSNPTSDRGTAYSSHLDSSVWEESRVT-YGTC 947
>UniRef50_Q98PX9 Cluster: 30S ribosomal protein S10; n=7;
Mollicutes|Rep: 30S ribosomal protein S10 - Mycoplasma
pulmonis
Length = 103
Score = 31.5 bits (68), Expect = 9.2
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = -2
Query: 222 AKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSP 67
A K+K+ GP+ +PTK I T K+ ++F+ R +KR I ++P
Sbjct: 29 ASKEKIDYSGPIPLPTK-REIFTILRSVHVNKKSREQFERRTYKRFIVFNNP 79
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 483,537,564
Number of Sequences: 1657284
Number of extensions: 10012196
Number of successful extensions: 24122
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 23593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24104
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24771286585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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