Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14d13
(247 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 111 5e-26
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 111 5e-26
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 111 5e-26
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 111 5e-26
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 111 5e-26
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 80 2e-16
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 68 8e-13
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 57 2e-09
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 55 6e-09
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 55 6e-09
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 53 3e-08
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 41 1e-04
Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical pr... 39 4e-04
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 38 0.001
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 38 0.001
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 37 0.002
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 34 0.012
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 34 0.015
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 33 0.027
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 33 0.027
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 29 0.44
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 29 0.58
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 28 0.76
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 27 1.3
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 27 1.3
V01494-1|CAA24738.1| 91|Caenorhabditis elegans myosin heavy ch... 27 1.3
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 27 1.3
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 27 2.3
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 27 2.3
Z68879-4|CAA93085.1| 215|Caenorhabditis elegans Hypothetical pr... 26 3.1
U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein ... 26 3.1
U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein ... 26 3.1
U40800-9|AAA81494.1| 316|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z81465-3|CAC42253.4| 800|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical pr... 26 4.1
U97016-2|ABC71840.1| 216|Caenorhabditis elegans Hypothetical pr... 26 4.1
U97016-1|ABC71839.1| 234|Caenorhabditis elegans Hypothetical pr... 26 4.1
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 26 4.1
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z70306-3|CAA94325.1| 318|Caenorhabditis elegans Hypothetical pr... 25 5.4
U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical pr... 25 5.4
AL161712-22|CAO82055.1| 158|Caenorhabditis elegans Hypothetical... 25 5.4
Z70718-6|CAA94677.1| 1029|Caenorhabditis elegans Hypothetical pr... 25 7.1
Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical pr... 25 7.1
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 25 7.1
L14324-3|AAA28185.1| 851|Caenorhabditis elegans Abnormal nucleo... 25 7.1
AF047027-1|AAC14263.1| 851|Caenorhabditis elegans B box zinc fi... 25 7.1
U53342-6|AAA96218.1| 466|Caenorhabditis elegans Hypothetical pr... 25 9.4
L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein. 25 9.4
AC025726-18|AAK73910.1| 996|Caenorhabditis elegans Hypothetical... 25 9.4
AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical... 25 9.4
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 111 bits (268), Expect = 5e-26
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 50 IQKESTLH 27
IQKESTLH
Sbjct: 61 IQKESTLH 68
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 111 bits (268), Expect = 5e-26
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 50 IQKESTLH 27
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 111 bits (268), Expect = 5e-26
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 50 IQKESTLH 27
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 111 bits (268), Expect = 5e-26
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 50 IQKESTLH 27
IQKESTLH
Sbjct: 213 IQKESTLH 220
Score = 111 bits (268), Expect = 5e-26
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 50 IQKESTLH 27
IQKESTLH
Sbjct: 289 IQKESTLH 296
Score = 111 bits (268), Expect = 5e-26
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 50 IQKESTLH 27
IQKESTLH
Sbjct: 365 IQKESTLH 372
Score = 109 bits (262), Expect = 3e-25
Identities = 49/68 (72%), Positives = 59/68 (86%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTL GKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 50 IQKESTLH 27
IQKESTLH
Sbjct: 441 IQKESTLH 448
Score = 74.1 bits (174), Expect = 1e-14
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAG 90
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAG
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 111 bits (268), Expect = 5e-26
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 50 IQKESTLH 27
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 111 bits (268), Expect = 5e-26
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 50 IQKESTLH 27
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 111 bits (268), Expect = 5e-26
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 50 IQKESTLH 27
IQKESTLH
Sbjct: 213 IQKESTLH 220
Score = 111 bits (268), Expect = 5e-26
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 50 IQKESTLH 27
IQKESTLH
Sbjct: 289 IQKESTLH 296
Score = 111 bits (268), Expect = 5e-26
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 50 IQKESTLH 27
IQKESTLH
Sbjct: 365 IQKESTLH 372
Score = 111 bits (268), Expect = 5e-26
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 50 IQKESTLH 27
IQKESTLH
Sbjct: 517 IQKESTLH 524
Score = 111 bits (268), Expect = 5e-26
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 50 IQKESTLH 27
IQKESTLH
Sbjct: 593 IQKESTLH 600
Score = 111 bits (268), Expect = 5e-26
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 50 IQKESTLH 27
IQKESTLH
Sbjct: 669 IQKESTLH 676
Score = 111 bits (268), Expect = 5e-26
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 50 IQKESTLH 27
IQKESTLH
Sbjct: 745 IQKESTLH 752
Score = 111 bits (268), Expect = 5e-26
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 50 IQKESTLH 27
IQKESTLH
Sbjct: 821 IQKESTLH 828
Score = 109 bits (262), Expect = 3e-25
Identities = 49/68 (72%), Positives = 59/68 (86%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTL GKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 50 IQKESTLH 27
IQKESTLH
Sbjct: 441 IQKESTLH 448
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 111 bits (268), Expect = 5e-26
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 50 IQKESTLH 27
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 111 bits (268), Expect = 5e-26
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 50 IQKESTLH 27
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 111 bits (268), Expect = 5e-26
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 50 IQKESTLH 27
IQKESTLH
Sbjct: 213 IQKESTLH 220
Score = 111 bits (268), Expect = 5e-26
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 50 IQKESTLH 27
IQKESTLH
Sbjct: 289 IQKESTLH 296
Score = 111 bits (268), Expect = 5e-26
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 50 IQKESTLH 27
IQKESTLH
Sbjct: 365 IQKESTLH 372
Score = 111 bits (268), Expect = 5e-26
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 50 IQKESTLH 27
IQKESTLH
Sbjct: 441 IQKESTLH 448
Score = 111 bits (268), Expect = 5e-26
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 50 IQKESTLH 27
IQKESTLH
Sbjct: 517 IQKESTLH 524
Score = 111 bits (268), Expect = 5e-26
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 50 IQKESTLH 27
IQKESTLH
Sbjct: 593 IQKESTLH 600
Score = 111 bits (268), Expect = 5e-26
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 50 IQKESTLH 27
IQKESTLH
Sbjct: 669 IQKESTLH 676
Score = 111 bits (268), Expect = 5e-26
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 50 IQKESTLH 27
IQKESTLH
Sbjct: 745 IQKESTLH 752
Score = 110 bits (265), Expect = 1e-25
Identities = 49/68 (72%), Positives = 60/68 (88%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 50 IQKESTLH 27
IQK+STLH
Sbjct: 821 IQKQSTLH 828
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 111 bits (268), Expect = 5e-26
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 50 IQKESTLH 27
IQKESTLH
Sbjct: 61 IQKESTLH 68
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 79.8 bits (188), Expect = 2e-16
Identities = 37/68 (54%), Positives = 47/68 (69%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
M I +KTLTGK I + EP + V +K+K+ +KEG+P QQRLIFAGKQ+ D KT ADY
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYK 60
Query: 50 IQKESTLH 27
+ S LH
Sbjct: 61 VLGGSVLH 68
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 68.1 bits (159), Expect = 8e-13
Identities = 32/69 (46%), Positives = 44/69 (63%)
Frame = -3
Query: 233 KMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADY 54
K+ + +KTL GKTI + +TV LK K+ +K GVP DQQRLIF QLE+ + + Y
Sbjct: 160 KLTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAY 219
Query: 53 NIQKESTLH 27
NI+ E +H
Sbjct: 220 NIRDEDIIH 228
Score = 35.5 bits (78), Expect = 0.005
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = -3
Query: 209 LTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 30
+TG IT E A + DL K+A+ + P ++ +D +T++DYNI+ STL
Sbjct: 98 VTGDPITVEASDA--IKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTL 151
Query: 29 HHGVTITRR 3
V + +
Sbjct: 152 RLEVPVKEK 160
Score = 29.1 bits (62), Expect = 0.44
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -3
Query: 242 NSVKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGV 123
+S M + +KT TGKTIT E ++K ++ DK+GV
Sbjct: 55 DSKTMLLSVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 56.8 bits (131), Expect = 2e-09
Identities = 24/37 (64%), Positives = 31/37 (83%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVP 120
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 55.2 bits (127), Expect = 6e-09
Identities = 29/66 (43%), Positives = 42/66 (63%)
Frame = -3
Query: 224 IFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQ 45
+F+KTL +T+ E E V +KQKI EG+P ++QRL +AG+QLEDS D I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLEDS----DCGID 56
Query: 44 KESTLH 27
E+T++
Sbjct: 57 SEATIY 62
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 55.2 bits (127), Expect = 6e-09
Identities = 29/66 (43%), Positives = 42/66 (63%)
Frame = -3
Query: 224 IFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQ 45
+F+KTL +T+ E E V +KQKI EG+P ++QRL +AG+QLEDS D I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLEDS----DCGID 56
Query: 44 KESTLH 27
E+T++
Sbjct: 57 SEATIY 62
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 52.8 bits (121), Expect = 3e-08
Identities = 27/68 (39%), Positives = 40/68 (58%)
Frame = -3
Query: 233 KMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADY 54
+ QIF+K L G + + +TV D+K I + +P L F+GK+LED ++ DY
Sbjct: 153 EFQIFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDY 211
Query: 53 NIQKESTL 30
NIQK ST+
Sbjct: 212 NIQKSSTI 219
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 40.7 bits (91), Expect = 1e-04
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = -3
Query: 224 IFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGK 87
+F+KTL +T+ E E V +KQKI EG+P ++QRL +A +
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical
protein F56F3.4 protein.
Length = 341
Score = 39.1 bits (87), Expect = 4e-04
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = -3
Query: 200 KTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLED-SKTMADYNIQKESTLHH 24
K I E + ETV+ LK +I + V ++Q L+F G +L+D +KTM D I ++ +
Sbjct: 32 KQIVVEMKDKETVSILKNRIEQETEVLTNRQVLLFKGMELKDNNKTMTDCGINSDAKITM 91
Query: 23 GVTIT 9
V ++
Sbjct: 92 NVKMS 96
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 37.9 bits (84), Expect = 0.001
Identities = 16/61 (26%), Positives = 36/61 (59%)
Frame = -3
Query: 209 LTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 30
+ G + + +++LKQ+I D+ G+PV +Q+L+ G ++D+ + A YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 29 H 27
+
Sbjct: 644 Y 644
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 37.9 bits (84), Expect = 0.001
Identities = 16/61 (26%), Positives = 36/61 (59%)
Frame = -3
Query: 209 LTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 30
+ G + + +++LKQ+I D+ G+PV +Q+L+ G ++D+ + A YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 29 H 27
+
Sbjct: 644 Y 644
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 37.1 bits (82), Expect = 0.002
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = -3
Query: 173 AETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 30
++T+ +K I V + R++ K LED T+A YNIQ+ STL
Sbjct: 192 SDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTL 239
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 34.3 bits (75), Expect = 0.012
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = -3
Query: 212 TLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADY 54
++ G+ + E+V LK KI + G+P + L GK L D K +ADY
Sbjct: 149 SMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY 201
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 33.9 bits (74), Expect = 0.015
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -3
Query: 173 AETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQK 42
++T+ +K +I V + R++ GK LED ++A YNIQ+
Sbjct: 215 SDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQE 258
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 33.1 bits (72), Expect = 0.027
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEG--VPVDQQRLIFAGKQLEDS 72
+ + +TLT E +T+A++K +A ++G + Q+LI+ GK L+DS
Sbjct: 52 LSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNGKILDDS 106
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 33.1 bits (72), Expect = 0.027
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -3
Query: 173 AETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 30
++T+ +K +I G+ R K LED T+A YNI++ ST+
Sbjct: 181 SDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 29.1 bits (62), Expect = 0.44
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 218 IKTLTGKTITAETEPAETVADLKQKIADKEGVPV 117
I TL G+TI P E +A K+ EG+P+
Sbjct: 279 ISTLDGRTIFYRVLPGEVIAHADVKVIHNEGMPM 312
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 28.7 bits (61), Expect = 0.58
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQ-LEDSKTMADY 54
M + IKT TGK IT E + +K ++ DK+GV G Q +E T+ D
Sbjct: 1 MLLSIKTSTGKNITVEAPKS-----VKTEVRDKQGVVFTVSYDKGTGNQIIEMEDTVQDV 55
Query: 53 NIQK 42
IQ+
Sbjct: 56 KIQE 59
Score = 25.4 bits (53), Expect = 5.4
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -3
Query: 233 KMQIFIKTLTGKTIT 189
++ +F+KT TGKTIT
Sbjct: 180 EIDVFVKTYTGKTIT 194
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 28.3 bits (60), Expect = 0.76
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQ-LEDSKTMADY 54
M + IKT TGKTIT E + +K ++ K+GV AG Q +E T+ D
Sbjct: 1 MLLSIKTSTGKTITVEAPKS-----VKTEVRYKQGVVFAVSYDKDAGNQIIEMEDTVQDV 55
Query: 53 NIQK 42
IQ+
Sbjct: 56 KIQE 59
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 27.5 bits (58), Expect = 1.3
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -3
Query: 113 QQRLIFAGKQLEDSKTMADYNIQKESTLHH 24
QQ+L KQ+E+++ +A+ N+QK L H
Sbjct: 1881 QQKLKTQKKQVEEAEELANLNLQKYKQLTH 1910
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 27.5 bits (58), Expect = 1.3
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -3
Query: 113 QQRLIFAGKQLEDSKTMADYNIQKESTLHH 24
QQ+L KQ+E+++ +A+ N+QK L H
Sbjct: 1881 QQKLKTQKKQVEEAEELANLNLQKYKQLTH 1910
>V01494-1|CAA24738.1| 91|Caenorhabditis elegans myosin heavy chain
protein.
Length = 91
Score = 27.5 bits (58), Expect = 1.3
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -3
Query: 113 QQRLIFAGKQLEDSKTMADYNIQKESTLHH 24
QQ+L KQ+E+++ +A+ N+QK L H
Sbjct: 9 QQKLKTQKKQVEEAEELANLNLQKYKQLTH 38
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 27.5 bits (58), Expect = 1.3
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -3
Query: 113 QQRLIFAGKQLEDSKTMADYNIQKESTLHH 24
QQ+L KQ+E+++ +A+ N+QK L H
Sbjct: 1884 QQKLKTQKKQVEEAEELANLNLQKYKQLTH 1913
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 26.6 bits (56), Expect = 2.3
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -3
Query: 215 KTLTGKTITAETEPAETVADLKQKIADKEGVP 120
+ L G + A T+P + V D +++ KEGVP
Sbjct: 812 QVLPGDPLEAGTKPNQIVLDTRKRKGLKEGVP 843
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 26.6 bits (56), Expect = 2.3
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -3
Query: 215 KTLTGKTITAETEPAETVADLKQKIADKEGVP 120
+ L G + A T+P + V D +++ KEGVP
Sbjct: 812 QVLPGDPLEAGTKPNQIVLDTRKRKGLKEGVP 843
>Z68879-4|CAA93085.1| 215|Caenorhabditis elegans Hypothetical
protein K08F4.5 protein.
Length = 215
Score = 26.2 bits (55), Expect = 3.1
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = -3
Query: 242 NSVKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTM 63
+ K IKT T + TA PAE V + K++ KE VP ++ + E++K
Sbjct: 39 DKTKAMSAIKTTTMGSTTANMHPAEPVVEKKEE--PKEKVPEKKEEEKKDATKKEEAKEE 96
Query: 62 ADYNIQKE 39
+KE
Sbjct: 97 KKEEERKE 104
>U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein
363, isoform b protein.
Length = 2692
Score = 26.2 bits (55), Expect = 3.1
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3
Query: 215 KTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFA 93
+TLTG I ++EP A K + E P + QR++ A
Sbjct: 544 QTLTGSLIPPKSEPIGRPASPKAILQKAETDPKELQRIVLA 584
>U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein
363, isoform a protein.
Length = 2695
Score = 26.2 bits (55), Expect = 3.1
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3
Query: 215 KTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFA 93
+TLTG I ++EP A K + E P + QR++ A
Sbjct: 544 QTLTGSLIPPKSEPIGRPASPKAILQKAETDPKELQRIVLA 584
>U40800-9|AAA81494.1| 316|Caenorhabditis elegans Hypothetical
protein D2096.8 protein.
Length = 316
Score = 26.2 bits (55), Expect = 3.1
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = -3
Query: 239 SVKMQIF-IKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTM 63
+VK ++ +K L KTI E++ + V +L+ + K DQ++ I AG ++E +K
Sbjct: 25 NVKQRVCALKNLQMKTIQIESDFYKRVHELEIEFEGKFKSTFDQRKAIVAG-EVEPTKEQ 83
Query: 62 AD 57
D
Sbjct: 84 ID 85
>Z81465-3|CAC42253.4| 800|Caenorhabditis elegans Hypothetical
protein C09F9.3 protein.
Length = 800
Score = 25.8 bits (54), Expect = 4.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 219 HQNIDGQNHYRRNGTRRDG 163
H+NI+G H NGT +G
Sbjct: 725 HRNINGHGHMNGNGTHTNG 743
>Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical
protein C35A5.4 protein.
Length = 427
Score = 25.8 bits (54), Expect = 4.1
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -1
Query: 226 KYSSKH*RAKPLPPKRNPQRRWPISSKKLPIKKVCP*INKD 104
K SK P PK+N Q + S KLP K P KD
Sbjct: 348 KTVSKALSHSPKSPKKNSQEKSAPPSPKLPPKTTAPTPTKD 388
>U97016-2|ABC71840.1| 216|Caenorhabditis elegans Hypothetical
protein B0261.4b protein.
Length = 216
Score = 25.8 bits (54), Expect = 4.1
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = -1
Query: 109 KDLSLRANNWKIPKLWPITIFKRNLLFTM 23
++L L++N+ + KLW + + +RN+L TM
Sbjct: 55 EELRLKSNS-DLHKLWYVCLKERNMLITM 82
>U97016-1|ABC71839.1| 234|Caenorhabditis elegans Hypothetical
protein B0261.4a protein.
Length = 234
Score = 25.8 bits (54), Expect = 4.1
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = -1
Query: 109 KDLSLRANNWKIPKLWPITIFKRNLLFTM 23
++L L++N+ + KLW + + +RN+L TM
Sbjct: 73 EELRLKSNS-DLHKLWYVCLKERNMLITM 100
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 25.8 bits (54), Expect = 4.1
Identities = 8/31 (25%), Positives = 20/31 (64%)
Frame = -3
Query: 119 VDQQRLIFAGKQLEDSKTMADYNIQKESTLH 27
V+ L + G++L+D++++ YNI + ++
Sbjct: 124 VESFNLYYGGQKLQDNRSIGSYNIDQSREIY 154
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical
protein C41A3.1 protein.
Length = 7829
Score = 25.8 bits (54), Expect = 4.1
Identities = 6/12 (50%), Positives = 11/12 (91%)
Frame = -2
Query: 39 IYSSPWCYDYEE 4
+Y++ WCYDY++
Sbjct: 110 VYTAAWCYDYKD 121
>Z70306-3|CAA94325.1| 318|Caenorhabditis elegans Hypothetical
protein C06G8.4 protein.
Length = 318
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +3
Query: 138 GNFLLEIGHRLCGFRFGGNGFARQCFDEYLHFYT 239
G +L + + C G GF F YLHF+T
Sbjct: 70 GKSMLYVSYGYCSLL--GEGFCFNIFAAYLHFHT 101
>U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical protein
F48E3.3 protein.
Length = 1493
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/52 (23%), Positives = 26/52 (50%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLED 75
+Q+ I + TGK++ E E + + D+EGV L+ + ++ ++
Sbjct: 1149 LQVVIDSFTGKSVRVRVEKREGMEERNLLSDDEEGVWSSLSNLVSSKEKTQE 1200
>AL161712-22|CAO82055.1| 158|Caenorhabditis elegans Hypothetical
protein Y66D12A.16a protein.
Length = 158
Score = 25.4 bits (53), Expect = 5.4
Identities = 15/55 (27%), Positives = 23/55 (41%)
Frame = -2
Query: 201 QNHYRRNGTRRDGGRSQAKNXXXXXXXXRSTKTYLCGQTIGRFQNYGRLQYSKGI 37
+ H+RRN TRRD A S +T C + F+ +Q+ K +
Sbjct: 90 KEHHRRNETRRDYRSISAVETVHETIKIESRRTVACEGNV-YFEETNVIQFPKNL 143
>Z70718-6|CAA94677.1| 1029|Caenorhabditis elegans Hypothetical
protein C04G2.6 protein.
Length = 1029
Score = 25.0 bits (52), Expect = 7.1
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 165 RLCGFRFGGNGFARQCFDEYL 227
++ + GNG +Q FDEYL
Sbjct: 217 QMAAYESSGNGNEKQIFDEYL 237
>Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical
protein C08H9.2 protein.
Length = 1220
Score = 25.0 bits (52), Expect = 7.1
Identities = 11/47 (23%), Positives = 23/47 (48%)
Frame = -3
Query: 188 AETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNI 48
A+ + V D +++I D +P R + AG+ + + + YN+
Sbjct: 842 AKNRIEDVVEDYEKQITDNVTIPAQFHRGLLAGRGAKIHELQSKYNV 888
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 25.0 bits (52), Expect = 7.1
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 113 QQRLIFAGKQLEDSKTMADYNIQKESTLHHGV 18
QQ++ +Q+ED++++A N+ K L H V
Sbjct: 1882 QQKIKTYKRQIEDAESLASGNLAKYRQLQHVV 1913
>L14324-3|AAA28185.1| 851|Caenorhabditis elegans Abnormal nucleoli
protein 1 protein.
Length = 851
Score = 25.0 bits (52), Expect = 7.1
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = -3
Query: 215 KTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQK-E 39
+ LT A + ETV++L I D++ FA KQ++ TM D IQ
Sbjct: 298 QVLTASLHNAHAQLEETVSNLINVIQDQKKTLAKDIDNAFAAKQIQ--LTMVDKRIQSMA 355
Query: 38 STLHHGVTITRR 3
L + +RR
Sbjct: 356 DKLSQTIEFSRR 367
>AF047027-1|AAC14263.1| 851|Caenorhabditis elegans B box zinc
finger protein Ncl-1 protein.
Length = 851
Score = 25.0 bits (52), Expect = 7.1
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = -3
Query: 215 KTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQK-E 39
+ LT A + ETV++L I D++ FA KQ++ TM D IQ
Sbjct: 298 QVLTASLHNAHAQLEETVSNLINVIQDQKKTLAKDIDNAFAAKQIQ--LTMVDKRIQSMA 355
Query: 38 STLHHGVTITRR 3
L + +RR
Sbjct: 356 DKLSQTIEFSRR 367
>U53342-6|AAA96218.1| 466|Caenorhabditis elegans Hypothetical
protein F01G12.6 protein.
Length = 466
Score = 24.6 bits (51), Expect = 9.4
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -3
Query: 218 IKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDS-KTMADYNIQK 42
+K + K + ET+ LK++ + + V D + L+ K+LED K + K
Sbjct: 279 LKEMRQKVMELETQNHVCTNQLKRQDEEMKRVREDSEVLVKKRKELEDQLKDEKEKLDNK 338
Query: 41 ESTLHHG 21
ES + G
Sbjct: 339 ESEFNEG 345
>L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein.
Length = 2553
Score = 24.6 bits (51), Expect = 9.4
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 24 MVKSRFLLNIVIGHSFGIFQLFARKDKSL-LIYGHTF 131
+++ +F ++ V + +GIF+L KSL + G TF
Sbjct: 33 LIREKFAMHDVNANEYGIFRLDENPSKSLWMDNGRTF 69
>AC025726-18|AAK73910.1| 996|Caenorhabditis elegans Hypothetical
protein Y71G12B.11b protein.
Length = 996
Score = 24.6 bits (51), Expect = 9.4
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 24 MVKSRFLLNIVIGHSFGIFQLFARKDKSL-LIYGHTF 131
+++ +F ++ V + +GIF+L KSL + G TF
Sbjct: 33 LIREKFAMHDVNANEYGIFRLDENPSKSLWMDNGRTF 69
>AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical
protein Y71G12B.11a protein.
Length = 2553
Score = 24.6 bits (51), Expect = 9.4
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 24 MVKSRFLLNIVIGHSFGIFQLFARKDKSL-LIYGHTF 131
+++ +F ++ V + +GIF+L KSL + G TF
Sbjct: 33 LIREKFAMHDVNANEYGIFRLDENPSKSLWMDNGRTF 69
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,106,708
Number of Sequences: 27780
Number of extensions: 114750
Number of successful extensions: 391
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 391
length of database: 12,740,198
effective HSP length: 61
effective length of database: 11,045,618
effective search space used: 220912360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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