Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14d06
(646 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M83738-1|AAA60226.1| 593|Homo sapiens protein-tyrosine phosphat... 30 8.1
BT007405-1|AAP36073.1| 593|Homo sapiens protein tyrosine phosph... 30 8.1
BC110592-1|AAI10593.1| 891|Homo sapiens ATP9A protein protein. 30 8.1
BC110591-1|AAI10592.1| 891|Homo sapiens ATP9A protein protein. 30 8.1
BC071574-1|AAH71574.1| 583|Homo sapiens PTPN9 protein protein. 30 8.1
BC010863-1|AAH10863.1| 593|Homo sapiens protein tyrosine phosph... 30 8.1
AL353799-2|CAI18889.1| 911|Homo sapiens ATPase, Class II, type ... 30 8.1
AL353799-1|CAI18890.1| 1047|Homo sapiens ATPase, Class II, type ... 30 8.1
AL138807-2|CAI22924.1| 911|Homo sapiens ATPase, Class II, type ... 30 8.1
AL138807-1|CAI22925.1| 1047|Homo sapiens ATPase, Class II, type ... 30 8.1
AL035684-2|CAI19203.1| 911|Homo sapiens ATPase, Class II, type ... 30 8.1
AL035684-1|CAI19202.1| 1047|Homo sapiens ATPase, Class II, type ... 30 8.1
AK172802-1|BAD18775.1| 951|Homo sapiens protein ( Homo sapiens ... 30 8.1
AB014511-1|BAA31586.1| 912|Homo sapiens KIAA0611 protein protein. 30 8.1
>M83738-1|AAA60226.1| 593|Homo sapiens protein-tyrosine phosphatase
protein.
Length = 593
Score = 29.9 bits (64), Expect = 8.1
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1
Query: 292 NSLRQLRRMDNVPDFHYHTKQTRSNAVRQNFPETNVRTPEGVQNALQQNPRLHN 453
+S R+ RR + + H + RS + F NVR P G AL RLH+
Sbjct: 66 HSYRETRRKEGIVKLKPHEEPLRSEILSGKFTILNVRDPTGASIAL-FTARLHH 118
>BT007405-1|AAP36073.1| 593|Homo sapiens protein tyrosine
phosphatase, non-receptor type 9 protein.
Length = 593
Score = 29.9 bits (64), Expect = 8.1
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1
Query: 292 NSLRQLRRMDNVPDFHYHTKQTRSNAVRQNFPETNVRTPEGVQNALQQNPRLHN 453
+S R+ RR + + H + RS + F NVR P G AL RLH+
Sbjct: 66 HSYRETRRKEGIVKLKPHEEPLRSEILSGKFTILNVRDPTGASIAL-FTARLHH 118
>BC110592-1|AAI10593.1| 891|Homo sapiens ATP9A protein protein.
Length = 891
Score = 29.9 bits (64), Expect = 8.1
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = -2
Query: 456 VIM*TGVLLQCVLNTFG-RAHVGLWEVLSDCIGSRLFGVVMKVWHVVHAPQ 307
V++ TG L+ V+NT R+ +GL+++ +C+ LFG ++ V V+ A Q
Sbjct: 116 VVLYTGRELRSVMNTSNPRSKIGLFDLEVNCLTKILFGALVVVSLVMVALQ 166
>BC110591-1|AAI10592.1| 891|Homo sapiens ATP9A protein protein.
Length = 891
Score = 29.9 bits (64), Expect = 8.1
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = -2
Query: 456 VIM*TGVLLQCVLNTFG-RAHVGLWEVLSDCIGSRLFGVVMKVWHVVHAPQ 307
V++ TG L+ V+NT R+ +GL+++ +C+ LFG ++ V V+ A Q
Sbjct: 116 VVLYTGRELRSVMNTSNPRSKIGLFDLEVNCLTKILFGALVVVSLVMVALQ 166
>BC071574-1|AAH71574.1| 583|Homo sapiens PTPN9 protein protein.
Length = 583
Score = 29.9 bits (64), Expect = 8.1
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1
Query: 292 NSLRQLRRMDNVPDFHYHTKQTRSNAVRQNFPETNVRTPEGVQNALQQNPRLHN 453
+S R+ RR + + H + RS + F NVR P G AL RLH+
Sbjct: 56 HSYRETRRKEGIVKLKPHEEPLRSEILSGKFTILNVRDPTGASIAL-FTARLHH 108
>BC010863-1|AAH10863.1| 593|Homo sapiens protein tyrosine
phosphatase, non-receptor type 9 protein.
Length = 593
Score = 29.9 bits (64), Expect = 8.1
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1
Query: 292 NSLRQLRRMDNVPDFHYHTKQTRSNAVRQNFPETNVRTPEGVQNALQQNPRLHN 453
+S R+ RR + + H + RS + F NVR P G AL RLH+
Sbjct: 66 HSYRETRRKEGIVKLKPHEEPLRSEILSGKFTILNVRDPTGASIAL-FTARLHH 118
>AL353799-2|CAI18889.1| 911|Homo sapiens ATPase, Class II, type 9A
protein.
Length = 911
Score = 29.9 bits (64), Expect = 8.1
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = -2
Query: 456 VIM*TGVLLQCVLNTFG-RAHVGLWEVLSDCIGSRLFGVVMKVWHVVHAPQ 307
V++ TG L+ V+NT R+ +GL+++ +C+ LFG ++ V V+ A Q
Sbjct: 136 VVLYTGRELRSVMNTSNPRSKIGLFDLEVNCLTKILFGALVVVSLVMVALQ 186
>AL353799-1|CAI18890.1| 1047|Homo sapiens ATPase, Class II, type 9A
protein.
Length = 1047
Score = 29.9 bits (64), Expect = 8.1
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = -2
Query: 456 VIM*TGVLLQCVLNTFG-RAHVGLWEVLSDCIGSRLFGVVMKVWHVVHAPQ 307
V++ TG L+ V+NT R+ +GL+++ +C+ LFG ++ V V+ A Q
Sbjct: 272 VVLYTGRELRSVMNTSNPRSKIGLFDLEVNCLTKILFGALVVVSLVMVALQ 322
>AL138807-2|CAI22924.1| 911|Homo sapiens ATPase, Class II, type 9A
protein.
Length = 911
Score = 29.9 bits (64), Expect = 8.1
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = -2
Query: 456 VIM*TGVLLQCVLNTFG-RAHVGLWEVLSDCIGSRLFGVVMKVWHVVHAPQ 307
V++ TG L+ V+NT R+ +GL+++ +C+ LFG ++ V V+ A Q
Sbjct: 136 VVLYTGRELRSVMNTSNPRSKIGLFDLEVNCLTKILFGALVVVSLVMVALQ 186
>AL138807-1|CAI22925.1| 1047|Homo sapiens ATPase, Class II, type 9A
protein.
Length = 1047
Score = 29.9 bits (64), Expect = 8.1
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = -2
Query: 456 VIM*TGVLLQCVLNTFG-RAHVGLWEVLSDCIGSRLFGVVMKVWHVVHAPQ 307
V++ TG L+ V+NT R+ +GL+++ +C+ LFG ++ V V+ A Q
Sbjct: 272 VVLYTGRELRSVMNTSNPRSKIGLFDLEVNCLTKILFGALVVVSLVMVALQ 322
>AL035684-2|CAI19203.1| 911|Homo sapiens ATPase, Class II, type 9A
protein.
Length = 911
Score = 29.9 bits (64), Expect = 8.1
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = -2
Query: 456 VIM*TGVLLQCVLNTFG-RAHVGLWEVLSDCIGSRLFGVVMKVWHVVHAPQ 307
V++ TG L+ V+NT R+ +GL+++ +C+ LFG ++ V V+ A Q
Sbjct: 136 VVLYTGRELRSVMNTSNPRSKIGLFDLEVNCLTKILFGALVVVSLVMVALQ 186
>AL035684-1|CAI19202.1| 1047|Homo sapiens ATPase, Class II, type 9A
protein.
Length = 1047
Score = 29.9 bits (64), Expect = 8.1
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = -2
Query: 456 VIM*TGVLLQCVLNTFG-RAHVGLWEVLSDCIGSRLFGVVMKVWHVVHAPQ 307
V++ TG L+ V+NT R+ +GL+++ +C+ LFG ++ V V+ A Q
Sbjct: 272 VVLYTGRELRSVMNTSNPRSKIGLFDLEVNCLTKILFGALVVVSLVMVALQ 322
>AK172802-1|BAD18775.1| 951|Homo sapiens protein ( Homo sapiens
cDNA FLJ23963 fis, clone HEP15535, highly similar to
Potential phospholipid-transporting ATPase IIA (EC
3.6.1.-). ).
Length = 951
Score = 29.9 bits (64), Expect = 8.1
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = -2
Query: 456 VIM*TGVLLQCVLNTFG-RAHVGLWEVLSDCIGSRLFGVVMKVWHVVHAPQ 307
V++ TG L+ V+NT R+ +GL+++ +C+ LFG ++ V V+ A Q
Sbjct: 176 VVLYTGRELRSVMNTSNPRSKIGLFDLEVNCLTKILFGALVVVSLVMVALQ 226
>AB014511-1|BAA31586.1| 912|Homo sapiens KIAA0611 protein protein.
Length = 912
Score = 29.9 bits (64), Expect = 8.1
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = -2
Query: 456 VIM*TGVLLQCVLNTFG-RAHVGLWEVLSDCIGSRLFGVVMKVWHVVHAPQ 307
V++ TG L+ V+NT R+ +GL+++ +C+ LFG ++ V V+ A Q
Sbjct: 137 VVLYTGRELRSVMNTSNPRSKIGLFDLEVNCLTKILFGALVVVSLVMVALQ 187
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,371,847
Number of Sequences: 237096
Number of extensions: 2140040
Number of successful extensions: 4333
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4333
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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