Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14d03
(751 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC001898-1|AAH01898.1| 247|Homo sapiens mannose-P-dolichol util... 202 8e-52
AF059752-1|AAG43121.1| 211|Homo sapiens My008 protein protein. 120 4e-27
DQ499597-1|ABF54968.1| 299|Homo sapiens HBeAg-binding protein 2... 102 1e-21
AK055923-1|BAB71046.1| 121|Homo sapiens protein ( Homo sapiens ... 77 7e-14
BC027625-1|AAH27625.1| 202|Homo sapiens PQ loop repeat containi... 53 1e-06
AK001091-1|BAE46613.1| 202|Homo sapiens protein ( Homo sapiens ... 53 1e-06
AC018463-1|AAX93048.1| 202|Homo sapiens unknown protein. 53 1e-06
BT007311-1|AAP35975.1| 693|Homo sapiens G protein-coupled recep... 35 0.27
BC008770-1|AAH08770.1| 693|Homo sapiens G protein-coupled recep... 35 0.27
AY358400-1|AAQ88766.1| 693|Homo sapiens GPR56 protein. 35 0.27
AJ011001-1|CAB37294.1| 687|Homo sapiens TM7XN1 protein protein. 35 0.27
AF106858-1|AAD30545.1| 693|Homo sapiens G-protein-coupled recep... 35 0.27
AB065909-1|BAC06124.1| 693|Homo sapiens seven transmembrane hel... 35 0.27
AK131550-1|BAD18684.1| 523|Homo sapiens protein ( Homo sapiens ... 34 0.63
AK027742-1|BAB55334.1| 126|Homo sapiens protein ( Homo sapiens ... 33 1.4
X55313-1|CAA39021.1| 455|Homo sapiens tumor necrosis factor rec... 30 7.7
M75866-1|AAA61201.1| 455|Homo sapiens tumor necrosis factor rec... 30 7.7
M63121-1|AAA36754.1| 455|Homo sapiens tumor necrosis factor rec... 30 7.7
M60275-1|AAA36756.1| 453|Homo sapiens TNF receptor protein. 30 7.7
M58286-1|AAA36753.1| 455|Homo sapiens tumor necrosis factor rec... 30 7.7
M33294-1|AAA03210.1| 455|Homo sapiens protein ( Human tumor nec... 30 7.7
BC010140-1|AAH10140.1| 455|Homo sapiens tumor necrosis factor r... 30 7.7
AY131997-1|AAM77802.1| 455|Homo sapiens tumor necrosis factor r... 30 7.7
AM492791-1|CAM34545.1| 712|Homo sapiens autogenous vein graft r... 30 7.7
>BC001898-1|AAH01898.1| 247|Homo sapiens mannose-P-dolichol
utilization defect 1 protein.
Length = 247
Score = 202 bits (494), Expect = 8e-52
Identities = 98/212 (46%), Positives = 134/212 (63%)
Frame = -3
Query: 710 FLKYNFLDVPCFKSTXXXXXXXXXXXXXXXXXVPQIFKILQSKSAEGINIYGVYLELFAI 531
F++++ L VPC K +PQ+FKIL +KSAEG+++ V LEL A+
Sbjct: 27 FVQWDLLHVPCLKILLSKGLGLGIVAGSLLVKLPQVFKILGAKSAEGLSLQSVMLELVAL 86
Query: 530 TANFAYSYVMGFPFSAWGEGTFLAIQTAMIAALVLHYGGAPMKGGIFLSVYCAIVSVLVS 351
T YS FPFS+WGE FL +QT I LV+HY G +KG FL+ Y ++ VL+S
Sbjct: 87 TGTMVYSITNNFPFSSWGEALFLMLQTITICFLVMHYRGQTVKGVAFLACYGLVLLVLLS 146
Query: 350 GYTSTDILWTMQAVTVPIILIAKSIQIGTNYKNGSTGQLSFITCFLLFGGSVARIFTSIQ 171
T ++ +QA VP +++ + +Q TNY NG TGQLS IT FLLFGGS+ARIFTSIQ
Sbjct: 147 PLTPLTVVTLLQASNVPAVVVGRLLQAATNYHNGHTGQLSAITVFLLFGGSLARIFTSIQ 206
Query: 170 ETGDSIIILTYCVSTIANGAIVLQMLWYWNVE 75
ETGD ++ T+ VS++ NG I Q+L+YWN +
Sbjct: 207 ETGDPLMAGTFVVSSLCNGLIATQLLFYWNAK 238
>AF059752-1|AAG43121.1| 211|Homo sapiens My008 protein protein.
Length = 211
Score = 120 bits (290), Expect = 4e-27
Identities = 63/168 (37%), Positives = 93/168 (55%), Gaps = 2/168 (1%)
Frame = -3
Query: 710 FLKYNFLDVPCFKSTXXXXXXXXXXXXXXXXXVPQIFKILQSKSAEGINIYGVYLELFAI 531
F++++ L VPC K +PQ+FKIL +KSAEG+++ V LEL A+
Sbjct: 27 FVQWDLLHVPCLKILLSKGLGLGIVAGSLLVKLPQVFKILGAKSAEGLSLQSVMLELVAL 86
Query: 530 TANFAYSYVMGFPFSAWGEGTFLAIQTAMIAALVLHYGGAPMKGGIFLSVYCAIVSVLVS 351
T YS FPFS+WGE FL +QT I LV+HY G +KG FL+ Y ++ VL+S
Sbjct: 87 TGTMVYSITNNFPFSSWGEALFLMLQTITICFLVMHYRGQTVKGVAFLACYGLVLLVLLS 146
Query: 350 GYTSTDILWTMQAVTVPIILIAKSIQIGTNYKNG--STGQLSFITCFL 213
T ++ +QA VP +++ + +Q TN G ++ Q S +C L
Sbjct: 147 PLTPLTVVTLLQASNVPAVVVGRLLQAATNTTTGTQASSQPSQSSCCL 194
>DQ499597-1|ABF54968.1| 299|Homo sapiens HBeAg-binding protein 2
binding protein A protein.
Length = 299
Score = 102 bits (245), Expect = 1e-21
Identities = 51/128 (39%), Positives = 72/128 (56%)
Frame = -3
Query: 710 FLKYNFLDVPCFKSTXXXXXXXXXXXXXXXXXVPQIFKILQSKSAEGINIYGVYLELFAI 531
F++++ L VPC K +PQ+FKIL +KSAEG+++ V LEL A+
Sbjct: 27 FVQWDLLHVPCLKILLSKGLGLGIVAGSLLVKLPQVFKILGAKSAEGLSLQSVMLELVAL 86
Query: 530 TANFAYSYVMGFPFSAWGEGTFLAIQTAMIAALVLHYGGAPMKGGIFLSVYCAIVSVLVS 351
T YS FPFS+WGE FL +QT I LV+HY G +KG FL+ Y ++ VL+S
Sbjct: 87 TGTMVYSITNNFPFSSWGEALFLMLQTITICFLVMHYRGQTVKGVAFLACYGLVLLVLLS 146
Query: 350 GYTSTDIL 327
T ++
Sbjct: 147 PLTPLTVV 154
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = -2
Query: 318 AGCHCSYHSHSQVNPNRNELQKWQHWSTVVYNLLPVVWR*CSKNLHINSRNWR 160
+G C+ + +P ++L + H + ++ LP VW NLH +S N R
Sbjct: 157 SGLQCACCGGGEASPGSHQLPQRAHRPALSHHSLPAVWGLPGPNLHFHSGNRR 209
>AK055923-1|BAB71046.1| 121|Homo sapiens protein ( Homo sapiens
cDNA FLJ31361 fis, clone MESAN2008460, highly similar to
Homo sapiens SL15 protein mRNA. ).
Length = 121
Score = 77.0 bits (181), Expect = 7e-14
Identities = 37/90 (41%), Positives = 50/90 (55%)
Frame = -3
Query: 710 FLKYNFLDVPCFKSTXXXXXXXXXXXXXXXXXVPQIFKILQSKSAEGINIYGVYLELFAI 531
F++++ L VPC K +PQ+FKIL +KSAEG+++ V LEL A+
Sbjct: 27 FVQWDLLHVPCLKILLSKGLGLGIVAGSLLVKLPQVFKILGAKSAEGLSLQSVMLELVAL 86
Query: 530 TANFAYSYVMGFPFSAWGEGTFLAIQTAMI 441
T YS FPFS+WGE FL +QT I
Sbjct: 87 TGTMVYSITNNFPFSSWGEALFLMLQTITI 116
>BC027625-1|AAH27625.1| 202|Homo sapiens PQ loop repeat containing
3 protein.
Length = 202
Score = 53.2 bits (122), Expect = 1e-06
Identities = 41/175 (23%), Positives = 75/175 (42%)
Frame = -3
Query: 611 PQIFKILQSKSAEGINIYGVYLELFAITANFAYSYVMGFPFSAWGEGTFLAIQTAMIAAL 432
PQI +L ++SA G+++ + LEL Y G+P + E L Q ++
Sbjct: 23 PQISAVLAARSARGLSLPSLLLELAGFLVFLRYQCYYGYPPLTYLEYPILIAQDVILLLC 82
Query: 431 VLHYGGAPMKGGIFLSVYCAIVSVLVSGYTSTDILWTMQAVTVPIILIAKSIQIGTNYKN 252
+ H+ G + +++V + +L D+ M T I +K Q+ +K
Sbjct: 83 IFHFNGNVKQATPYIAVLVSSWFILALQKWIIDL--AMNLCTF-ISAASKFAQLQCLWKT 139
Query: 251 GSTGQLSFITCFLLFGGSVARIFTSIQETGDSIIILTYCVSTIANGAIVLQMLWY 87
+G +S +T L RI T++ T D I+L + + N + + +L Y
Sbjct: 140 RDSGTVSALTWSLSSYTCATRIITTLMTTNDFTILLRFVIMLALNIWVTVTVLRY 194
>AK001091-1|BAE46613.1| 202|Homo sapiens protein ( Homo sapiens
cDNA FLJ10229 fis, clone HEMBB1000136. ).
Length = 202
Score = 53.2 bits (122), Expect = 1e-06
Identities = 41/175 (23%), Positives = 75/175 (42%)
Frame = -3
Query: 611 PQIFKILQSKSAEGINIYGVYLELFAITANFAYSYVMGFPFSAWGEGTFLAIQTAMIAAL 432
PQI +L ++SA G+++ + LEL Y G+P + E L Q ++
Sbjct: 23 PQISAVLAARSARGLSLPSLLLELAGFLVFLRYQCYYGYPPLTYLEYPILIAQDVILLLC 82
Query: 431 VLHYGGAPMKGGIFLSVYCAIVSVLVSGYTSTDILWTMQAVTVPIILIAKSIQIGTNYKN 252
+ H+ G + +++V + +L D+ M T I +K Q+ +K
Sbjct: 83 IFHFNGNVKQATPYIAVLVSSWFILALQKWIIDL--AMNLCTF-ISAASKFAQLQCLWKT 139
Query: 251 GSTGQLSFITCFLLFGGSVARIFTSIQETGDSIIILTYCVSTIANGAIVLQMLWY 87
+G +S +T L RI T++ T D I+L + + N + + +L Y
Sbjct: 140 RDSGTVSALTWSLSSYTCATRIITTLMTTNDFTILLRFVIMLALNIWVTVTVLRY 194
>AC018463-1|AAX93048.1| 202|Homo sapiens unknown protein.
Length = 202
Score = 53.2 bits (122), Expect = 1e-06
Identities = 41/175 (23%), Positives = 75/175 (42%)
Frame = -3
Query: 611 PQIFKILQSKSAEGINIYGVYLELFAITANFAYSYVMGFPFSAWGEGTFLAIQTAMIAAL 432
PQI +L ++SA G+++ + LEL Y G+P + E L Q ++
Sbjct: 23 PQISAVLAARSARGLSLPSLLLELAGFLVFLRYQCYYGYPPLTYLEYPILIAQDVILLLC 82
Query: 431 VLHYGGAPMKGGIFLSVYCAIVSVLVSGYTSTDILWTMQAVTVPIILIAKSIQIGTNYKN 252
+ H+ G + +++V + +L D+ M T I +K Q+ +K
Sbjct: 83 IFHFNGNVKQATPYIAVLVSSWFILALQKWIIDL--AMNLCTF-ISAASKFAQLQCLWKT 139
Query: 251 GSTGQLSFITCFLLFGGSVARIFTSIQETGDSIIILTYCVSTIANGAIVLQMLWY 87
+G +S +T L RI T++ T D I+L + + N + + +L Y
Sbjct: 140 RDSGTVSALTWSLSSYTCATRIITTLMTTNDFTILLRFVIMLALNIWVTVTVLRY 194
>BT007311-1|AAP35975.1| 693|Homo sapiens G protein-coupled receptor
56 protein.
Length = 693
Score = 35.1 bits (77), Expect = 0.27
Identities = 39/173 (22%), Positives = 78/173 (45%), Gaps = 7/173 (4%)
Frame = -3
Query: 575 EGINIYGVYLELFAITANFAYSYVMGFPFSAWGEGTFLAIQTAMI-----AALVLHYGGA 411
EG N+Y + +E+F + Y++ WG FL A++ ++L
Sbjct: 496 EGYNLYRLVVEVFG---TYVPGYLLKLSAMGWGFPIFLVTLVALVDVDNYGPIILAVHRT 552
Query: 410 PMKGGIFLSVYCAIVSVLVSGYTSTDILWTMQAVTVPII--LIAKSIQIGTNYKNGSTGQ 237
P +G I+ S+ C I LVS T+ + + + ++ ++ + +++ + + S
Sbjct: 553 P-EGVIYPSM-CWIRDSLVSYITNLGLFSLVFLFNMAMLATMVVQILRLRPHTQKWSH-V 609
Query: 236 LSFITCFLLFGGSVARIFTSIQETGDSIIILTYCVSTIANGAIVLQMLWYWNV 78
L+ + L+ G A IF S +G +++ Y S I + L +WYW++
Sbjct: 610 LTLLGLSLVLGLPWALIFFSFA-SGTFQLVVLYLFSIITSFQGFLIFIWYWSM 661
>BC008770-1|AAH08770.1| 693|Homo sapiens G protein-coupled receptor
56 protein.
Length = 693
Score = 35.1 bits (77), Expect = 0.27
Identities = 39/173 (22%), Positives = 78/173 (45%), Gaps = 7/173 (4%)
Frame = -3
Query: 575 EGINIYGVYLELFAITANFAYSYVMGFPFSAWGEGTFLAIQTAMI-----AALVLHYGGA 411
EG N+Y + +E+F + Y++ WG FL A++ ++L
Sbjct: 496 EGYNLYRLVVEVFG---TYVPGYLLKLSAMGWGFPIFLVTLVALVDVDNYGPIILAVHRT 552
Query: 410 PMKGGIFLSVYCAIVSVLVSGYTSTDILWTMQAVTVPII--LIAKSIQIGTNYKNGSTGQ 237
P +G I+ S+ C I LVS T+ + + + ++ ++ + +++ + + S
Sbjct: 553 P-EGVIYPSM-CWIRDSLVSYITNLGLFSLVFLFNMAMLATMVVQILRLRPHTQKWSH-V 609
Query: 236 LSFITCFLLFGGSVARIFTSIQETGDSIIILTYCVSTIANGAIVLQMLWYWNV 78
L+ + L+ G A IF S +G +++ Y S I + L +WYW++
Sbjct: 610 LTLLGLSLVLGLPWALIFFSFA-SGTFQLVVLYLFSIITSFQGFLIFIWYWSM 661
>AY358400-1|AAQ88766.1| 693|Homo sapiens GPR56 protein.
Length = 693
Score = 35.1 bits (77), Expect = 0.27
Identities = 39/173 (22%), Positives = 78/173 (45%), Gaps = 7/173 (4%)
Frame = -3
Query: 575 EGINIYGVYLELFAITANFAYSYVMGFPFSAWGEGTFLAIQTAMI-----AALVLHYGGA 411
EG N+Y + +E+F + Y++ WG FL A++ ++L
Sbjct: 496 EGYNLYRLVVEVFG---TYVPGYLLKLSAMGWGFPIFLVTLVALVDVDNYGPIILAVHRT 552
Query: 410 PMKGGIFLSVYCAIVSVLVSGYTSTDILWTMQAVTVPII--LIAKSIQIGTNYKNGSTGQ 237
P +G I+ S+ C I LVS T+ + + + ++ ++ + +++ + + S
Sbjct: 553 P-EGVIYPSM-CWIRDSLVSYITNLGLFSLVFLFNMAMLATMVVQILRLRPHTQKWSH-V 609
Query: 236 LSFITCFLLFGGSVARIFTSIQETGDSIIILTYCVSTIANGAIVLQMLWYWNV 78
L+ + L+ G A IF S +G +++ Y S I + L +WYW++
Sbjct: 610 LTLLGLSLVLGLPWALIFFSFA-SGTFQLVVLYLFSIITSFQGFLIFIWYWSM 661
>AJ011001-1|CAB37294.1| 687|Homo sapiens TM7XN1 protein protein.
Length = 687
Score = 35.1 bits (77), Expect = 0.27
Identities = 39/173 (22%), Positives = 78/173 (45%), Gaps = 7/173 (4%)
Frame = -3
Query: 575 EGINIYGVYLELFAITANFAYSYVMGFPFSAWGEGTFLAIQTAMI-----AALVLHYGGA 411
EG N+Y + +E+F + Y++ WG FL A++ ++L
Sbjct: 490 EGYNLYRLVVEVFG---TYVPGYLLKLSAMGWGFPIFLVTLVALVDVDNYGPIILAVHRT 546
Query: 410 PMKGGIFLSVYCAIVSVLVSGYTSTDILWTMQAVTVPII--LIAKSIQIGTNYKNGSTGQ 237
P +G I+ S+ C I LVS T+ + + + ++ ++ + +++ + + S
Sbjct: 547 P-EGVIYPSM-CWIRDSLVSYITNLGLFSLVFLFNMAMLATMVVQILRLRPHTQKWSH-V 603
Query: 236 LSFITCFLLFGGSVARIFTSIQETGDSIIILTYCVSTIANGAIVLQMLWYWNV 78
L+ + L+ G A IF S +G +++ Y S I + L +WYW++
Sbjct: 604 LTLLGLSLVLGLPWALIFFSFA-SGTFQLVVLYLFSIITSFQGFLIFIWYWSM 655
>AF106858-1|AAD30545.1| 693|Homo sapiens G-protein-coupled receptor
protein.
Length = 693
Score = 35.1 bits (77), Expect = 0.27
Identities = 39/173 (22%), Positives = 78/173 (45%), Gaps = 7/173 (4%)
Frame = -3
Query: 575 EGINIYGVYLELFAITANFAYSYVMGFPFSAWGEGTFLAIQTAMI-----AALVLHYGGA 411
EG N+Y + +E+F + Y++ WG FL A++ ++L
Sbjct: 496 EGYNLYRLVVEVFG---TYVPGYLLKLSAMGWGFPIFLVTLVALVDVDNYGPIILAVHRT 552
Query: 410 PMKGGIFLSVYCAIVSVLVSGYTSTDILWTMQAVTVPII--LIAKSIQIGTNYKNGSTGQ 237
P +G I+ S+ C I LVS T+ + + + ++ ++ + +++ + + S
Sbjct: 553 P-EGVIYPSM-CWIRDSLVSYITNLGLFSLVFLFNMAMLATMVVQILRLRPHTQKWSH-V 609
Query: 236 LSFITCFLLFGGSVARIFTSIQETGDSIIILTYCVSTIANGAIVLQMLWYWNV 78
L+ + L+ G A IF S +G +++ Y S I + L +WYW++
Sbjct: 610 LTLLGLSLVLGLPWALIFFSFA-SGTFQLVVLYLFSIITSFQGFLIFIWYWSM 661
>AB065909-1|BAC06124.1| 693|Homo sapiens seven transmembrane helix
receptor protein.
Length = 693
Score = 35.1 bits (77), Expect = 0.27
Identities = 39/173 (22%), Positives = 78/173 (45%), Gaps = 7/173 (4%)
Frame = -3
Query: 575 EGINIYGVYLELFAITANFAYSYVMGFPFSAWGEGTFLAIQTAMI-----AALVLHYGGA 411
EG N+Y + +E+F + Y++ WG FL A++ ++L
Sbjct: 496 EGYNLYRLVVEVFG---TYVPGYLLKLSAMGWGFPIFLVTLVALVDVDNYGPIILAVHRT 552
Query: 410 PMKGGIFLSVYCAIVSVLVSGYTSTDILWTMQAVTVPII--LIAKSIQIGTNYKNGSTGQ 237
P +G I+ S+ C I LVS T+ + + + ++ ++ + +++ + + S
Sbjct: 553 P-EGVIYPSM-CWIRDSLVSYITNLGLFSLVFLFNMAMLATMVVQILRLRPHTQKWSH-V 609
Query: 236 LSFITCFLLFGGSVARIFTSIQETGDSIIILTYCVSTIANGAIVLQMLWYWNV 78
L+ + L+ G A IF S +G +++ Y S I + L +WYW++
Sbjct: 610 LTLLGLSLVLGLPWALIFFSFA-SGTFQLVVLYLFSIITSFQGFLIFIWYWSM 661
>AK131550-1|BAD18684.1| 523|Homo sapiens protein ( Homo sapiens
cDNA FLJ16789 fis, clone PROST2010326, highly similar
to Homo sapiens G protein-coupled receptor 56 (GPR56).
).
Length = 523
Score = 33.9 bits (74), Expect = 0.63
Identities = 37/173 (21%), Positives = 74/173 (42%), Gaps = 7/173 (4%)
Frame = -3
Query: 575 EGINIYGVYLELFAITANFAYSYVMGFPFSAWGEGTFLAIQTAMI-----AALVLHYGGA 411
EG N+Y + +E+F + Y++ WG FL A++ ++L
Sbjct: 326 EGYNLYRLVVEVFG---TYVPGYLLKLSAMGWGFPIFLVTLVALVDVDNYGPIILAVHRT 382
Query: 410 PMKGGIFLSVYCAIVSVLVSGYTSTDILWTMQAVTVPII--LIAKSIQIGTNYKNGSTGQ 237
P G+ C I LVS T+ + + + ++ ++ + +++ + + S
Sbjct: 383 PE--GVIYPSRCWIRDSLVSYITNLGLFSLVFLFNMAMLATMVVQILRLRPHTQKWSH-V 439
Query: 236 LSFITCFLLFGGSVARIFTSIQETGDSIIILTYCVSTIANGAIVLQMLWYWNV 78
L+ + L+ G A IF S +G +++ Y S I + L +WYW++
Sbjct: 440 LTLLGLSLVLGLPWALIFFSFA-SGTFQLVVLYLFSIITSFQGFLIFIWYWSM 491
>AK027742-1|BAB55334.1| 126|Homo sapiens protein ( Homo sapiens
cDNA FLJ14836 fis, clone OVARC1001702. ).
Length = 126
Score = 32.7 bits (71), Expect = 1.4
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = -3
Query: 710 FLKYNFLDVPCFKSTXXXXXXXXXXXXXXXXXVPQIFKILQSKSAEGI 567
F++++ L VPC K +PQ+FKIL +KSA G+
Sbjct: 27 FVQWDLLHVPCLKILLSKGLGLGIVAGSLLVKLPQVFKILGAKSAAGL 74
>X55313-1|CAA39021.1| 455|Homo sapiens tumor necrosis factor
receptor type 1 protein.
Length = 455
Score = 30.3 bits (65), Expect = 7.7
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = -2
Query: 579 CRRNQY--LWSLSGVVCYHCELCL 514
CR+NQY WS + C++C LCL
Sbjct: 127 CRKNQYRHYWSENLFQCFNCSLCL 150
>M75866-1|AAA61201.1| 455|Homo sapiens tumor necrosis factor
receptor 1 protein.
Length = 455
Score = 30.3 bits (65), Expect = 7.7
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = -2
Query: 579 CRRNQY--LWSLSGVVCYHCELCL 514
CR+NQY WS + C++C LCL
Sbjct: 127 CRKNQYRHYWSENLFQCFNCSLCL 150
>M63121-1|AAA36754.1| 455|Homo sapiens tumor necrosis factor
receptor protein.
Length = 455
Score = 30.3 bits (65), Expect = 7.7
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = -2
Query: 579 CRRNQY--LWSLSGVVCYHCELCL 514
CR+NQY WS + C++C LCL
Sbjct: 127 CRKNQYRHYWSENLFQCFNCSLCL 150
>M60275-1|AAA36756.1| 453|Homo sapiens TNF receptor protein.
Length = 453
Score = 30.3 bits (65), Expect = 7.7
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = -2
Query: 579 CRRNQY--LWSLSGVVCYHCELCL 514
CR+NQY WS + C++C LCL
Sbjct: 127 CRKNQYRHYWSENLFQCFNCSLCL 150
>M58286-1|AAA36753.1| 455|Homo sapiens tumor necrosis factor
receptor protein.
Length = 455
Score = 30.3 bits (65), Expect = 7.7
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = -2
Query: 579 CRRNQY--LWSLSGVVCYHCELCL 514
CR+NQY WS + C++C LCL
Sbjct: 127 CRKNQYRHYWSENLFQCFNCSLCL 150
>M33294-1|AAA03210.1| 455|Homo sapiens protein ( Human tumor
necrosis factor receptor mRNA, complete cds. ).
Length = 455
Score = 30.3 bits (65), Expect = 7.7
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = -2
Query: 579 CRRNQY--LWSLSGVVCYHCELCL 514
CR+NQY WS + C++C LCL
Sbjct: 127 CRKNQYRHYWSENLFQCFNCSLCL 150
>BC010140-1|AAH10140.1| 455|Homo sapiens tumor necrosis factor
receptor superfamily, member 1A protein.
Length = 455
Score = 30.3 bits (65), Expect = 7.7
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = -2
Query: 579 CRRNQY--LWSLSGVVCYHCELCL 514
CR+NQY WS + C++C LCL
Sbjct: 127 CRKNQYRHYWSENLFQCFNCSLCL 150
>AY131997-1|AAM77802.1| 455|Homo sapiens tumor necrosis factor
receptor superfamily, member 1A protein.
Length = 455
Score = 30.3 bits (65), Expect = 7.7
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = -2
Query: 579 CRRNQY--LWSLSGVVCYHCELCL 514
CR+NQY WS + C++C LCL
Sbjct: 127 CRKNQYRHYWSENLFQCFNCSLCL 150
>AM492791-1|CAM34545.1| 712|Homo sapiens autogenous vein graft
remodeling associated protein 8 protein.
Length = 712
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -2
Query: 219 LPVVWR*CSKNLHINSRNWRLHYYSDLLCFNH 124
+P++W CS HI ++ W + S+LLC ++
Sbjct: 106 VPILWHRCSLPTHIRTQRWNV-LISNLLCISY 136
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,495,225
Number of Sequences: 237096
Number of extensions: 2687087
Number of successful extensions: 12088
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 11525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12088
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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