Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14c20
(573 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 26 0.30
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 26 0.30
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 26 0.30
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 26 0.30
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 26 0.30
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 26 0.30
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 26 0.30
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 26 0.30
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 26 0.30
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 26 0.30
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 25 0.70
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 24 1.2
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 24 1.2
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 23 2.8
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 2.8
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 3.8
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 5.0
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 5.0
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 5.0
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 5.0
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 22 5.0
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 22 5.0
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 5.0
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 21 6.6
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 21 8.7
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.8 bits (54), Expect = 0.30
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2
Query: 368 NNSTKRNFNYQNNVDYKTRKNPFWLY 291
NNS N+NY NN + + N LY
Sbjct: 85 NNSLSNNYNYNNNYNNYNKHNYNKLY 110
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.8 bits (54), Expect = 0.30
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2
Query: 368 NNSTKRNFNYQNNVDYKTRKNPFWLY 291
NNS N+NY NN + + N LY
Sbjct: 85 NNSLSNNYNYNNNYNNYNKHNYNKLY 110
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.8 bits (54), Expect = 0.30
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2
Query: 368 NNSTKRNFNYQNNVDYKTRKNPFWLY 291
NNS N+NY NN + + N LY
Sbjct: 85 NNSLSNNYNYNNNYNNYNKHNYNKLY 110
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.8 bits (54), Expect = 0.30
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2
Query: 368 NNSTKRNFNYQNNVDYKTRKNPFWLY 291
NNS N+NY NN + + N LY
Sbjct: 85 NNSLSNNYNYNNNYNNYNKHNYNKLY 110
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.8 bits (54), Expect = 0.30
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2
Query: 368 NNSTKRNFNYQNNVDYKTRKNPFWLY 291
NNS N+NY NN + + N LY
Sbjct: 85 NNSLSNNYNYNNNYNNYNKHNYNKLY 110
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.8 bits (54), Expect = 0.30
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2
Query: 368 NNSTKRNFNYQNNVDYKTRKNPFWLY 291
NNS N+NY NN + + N LY
Sbjct: 85 NNSLSNNYNYNNNYNNYNKHNYNKLY 110
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.8 bits (54), Expect = 0.30
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2
Query: 368 NNSTKRNFNYQNNVDYKTRKNPFWLY 291
NNS N+NY NN + + N LY
Sbjct: 85 NNSLSNNYNYNNNYNNYNKHNYNKLY 110
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.8 bits (54), Expect = 0.30
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2
Query: 368 NNSTKRNFNYQNNVDYKTRKNPFWLY 291
NNS N+NY NN + + N LY
Sbjct: 85 NNSLSNNYNYNNNYNNYNKHNYNKLY 110
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 25.8 bits (54), Expect = 0.30
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2
Query: 368 NNSTKRNFNYQNNVDYKTRKNPFWLY 291
NNS N+NY NN + + N LY
Sbjct: 318 NNSLSNNYNYNNNYNNYNKHNYNKLY 343
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 25.8 bits (54), Expect = 0.30
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2
Query: 368 NNSTKRNFNYQNNVDYKTRKNPFWLY 291
NNS N+NY NN + + N LY
Sbjct: 318 NNSLSNNYNYNNNYNNYNKHNYNKLY 343
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 24.6 bits (51), Expect = 0.70
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = -2
Query: 395 SNKIIPKA--FNNSTKRNFNYQNNVDYKTRKNPFW 297
SNK I +NN+ N+NY NN +Y K ++
Sbjct: 86 SNKTIHNNNNYNNNNYNNYNYNNN-NYNNYKKLYY 119
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -2
Query: 389 KIIPKAFNNSTKRNFNYQNN 330
KII N + N NY NN
Sbjct: 80 KIISSLSNKTIHNNNNYNNN 99
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.2
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 368 NNSTKRNFNYQNNVDYKTRKNPFWLY 291
NN N+NY NN + + N LY
Sbjct: 85 NNPLSNNYNYNNNYNNYNKHNYNKLY 110
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 1.2
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2
Query: 368 NNSTKRNFNYQNN 330
NNS N+NY NN
Sbjct: 85 NNSLSNNYNYNNN 97
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 22.6 bits (46), Expect = 2.8
Identities = 8/32 (25%), Positives = 17/32 (53%)
Frame = -3
Query: 244 IYFRINYNVIPSIVAAEEISQQSNSDSDVETK 149
IYF NY+++P+ A+ + + + + K
Sbjct: 370 IYFLGNYSLVPTTTASPTTEPSTTTSTTISQK 401
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.6 bits (46), Expect = 2.8
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -2
Query: 371 FNNSTKRNFNYQNNVDYKTRK 309
+NN+ N NY NN + +K
Sbjct: 333 YNNNNYNNNNYNNNYNNNCKK 353
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.2 bits (45), Expect = 3.8
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -2
Query: 368 NNSTKRNFNYQNNVDYKTRKNPFW 297
NN+ N+N NN +Y K ++
Sbjct: 331 NNNYNNNYNNYNNNNYNNYKKLYY 354
Score = 21.8 bits (44), Expect = 5.0
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -2
Query: 389 KIIPKAFNNSTKRNFNYQNNVDYKTRKNPF 300
KII N + N NY NN +Y N +
Sbjct: 313 KIISSLSNKTIHNNNNYNNN-NYNNNYNNY 341
Score = 21.4 bits (43), Expect = 6.6
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -2
Query: 395 SNKIIPKAFNNSTKRNFNYQNNVDYKTRKN 306
SNK I NN+ N NY NN + N
Sbjct: 319 SNKTI---HNNNNYNNNNYNNNYNNYNNNN 345
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 5.0
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -2
Query: 389 KIIPKAFNNSTKRNFNYQNNVDY 321
KII NN N+N NN +Y
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNNY 102
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 5.0
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -2
Query: 389 KIIPKAFNNSTKRNFNYQNNVDY 321
KII NN N+N NN +Y
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNNY 102
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 5.0
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -2
Query: 389 KIIPKAFNNSTKRNFNYQNNVDY 321
KII NN N+N NN +Y
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNNY 102
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 5.0
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -2
Query: 389 KIIPKAFNNSTKRNFNYQNNVDY 321
KII NN N+N NN +Y
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNNY 102
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.8 bits (44), Expect = 5.0
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -2
Query: 389 KIIPKAFNNSTKRNFNYQNNVDYKTR 312
KII NN NY NN +Y +
Sbjct: 80 KIISSLSNNYISNISNYNNNNNYNKK 105
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.0
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -2
Query: 389 KIIPKAFNNSTKRNFNYQNNVDYKTRKNPFW 297
KII N + N NY NN +Y K ++
Sbjct: 80 KIISSLSNKTIHNNNNYNNN-NYNNYKKLYY 109
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.8 bits (44), Expect = 5.0
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -2
Query: 389 KIIPKAFNNSTKRNFNYQNNVDYKTR 312
KII NN NY NN +Y +
Sbjct: 318 KIISSLSNNYISNISNYNNNNNYNKK 343
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 6.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 389 KIIPKAFNNSTKRNFNYQNNVDYK 318
KII + +NS + NY NN +YK
Sbjct: 302 KII-SSLSNSCNYSNNYYNNNNYK 324
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 21.0 bits (42), Expect = 8.7
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -2
Query: 389 KIIPKAFNNSTKRNFNYQNNVDYK 318
KII NN N+N NN + K
Sbjct: 80 KIISSLSNNYKYSNYNNYNNYNKK 103
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,598
Number of Sequences: 438
Number of extensions: 3143
Number of successful extensions: 47
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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