Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14c10
(822 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC065933-1|AAH65933.1| 199|Homo sapiens chromatin modifying pro... 135 2e-31
BC012733-1|AAH12733.3| 199|Homo sapiens chromatin modifying pro... 135 2e-31
AF306520-1|AAL48200.1| 199|Homo sapiens C18orf2 protein. 135 2e-31
AF281064-1|AAG01449.1| 196|Homo sapiens CHMP1.5 protein. 135 2e-31
BT006841-1|AAP35487.1| 196|Homo sapiens procollagen (type III) ... 96 1e-19
BC132713-1|AAI32714.1| 196|Homo sapiens chromatin modifying pro... 96 1e-19
BC132711-1|AAI32712.1| 196|Homo sapiens chromatin modifying pro... 96 1e-19
AF281063-1|AAG01448.1| 196|Homo sapiens charged multivesicular ... 96 1e-19
BC010000-1|AAH10000.2| 68|Homo sapiens CHMP1A protein protein. 58 4e-08
CR457002-1|CAG33283.1| 222|Homo sapiens BC-2 protein. 48 4e-05
BT007298-1|AAP35962.1| 222|Homo sapiens putative breast adenoca... 48 4e-05
BC002502-1|AAH02502.1| 222|Homo sapiens chromatin modifying pro... 48 4e-05
AY364248-1|AAQ76807.1| 222|Homo sapiens putative breast adenoca... 48 4e-05
AJ277113-1|CAC14310.1| 222|Homo sapiens BC-2 protein protein. 48 4e-05
AF042384-1|AAC00005.1| 222|Homo sapiens BC-2 protein protein. 48 4e-05
BC059404-1|AAH59404.1| 480|Homo sapiens B-cell CLL/lymphoma 6, ... 31 5.0
AB076581-1|BAC00963.1| 480|Homo sapiens BAZF protein. 31 5.0
AB076580-1|BAC00962.1| 480|Homo sapiens BAZF protein. 31 5.0
>BC065933-1|AAH65933.1| 199|Homo sapiens chromatin modifying
protein 1B protein.
Length = 199
Score = 135 bits (326), Expect = 2e-31
Identities = 70/102 (68%), Positives = 81/102 (79%)
Frame = -1
Query: 795 KAMDAAXKSMNLEKISTLMDKFESQFEDLDVQSSYMENAMSQTTTTTVPQGDVDNLLQQV 616
K+MDA K+MNLEKIS LMDKFE QFE LDVQ+ ME+ MS TTT T PQ VD LLQ++
Sbjct: 97 KSMDATLKTMNLEKISALMDKFEHQFETLDVQTQQMEDTMSSTTTLTTPQNQVDMLLQEM 156
Query: 615 ADEAGLELNMELPSGVPSTSIGTATVVSQEQDELTQRLARLR 490
ADEAGL+LNMELP G + S+GT +V S EQDEL+QRLARLR
Sbjct: 157 ADEAGLDLNMELPQG-QTGSVGT-SVASAEQDELSQRLARLR 196
>BC012733-1|AAH12733.3| 199|Homo sapiens chromatin modifying
protein 1B protein.
Length = 199
Score = 135 bits (326), Expect = 2e-31
Identities = 70/102 (68%), Positives = 81/102 (79%)
Frame = -1
Query: 795 KAMDAAXKSMNLEKISTLMDKFESQFEDLDVQSSYMENAMSQTTTTTVPQGDVDNLLQQV 616
K+MDA K+MNLEKIS LMDKFE QFE LDVQ+ ME+ MS TTT T PQ VD LLQ++
Sbjct: 97 KSMDATLKTMNLEKISALMDKFEHQFETLDVQTQQMEDTMSSTTTLTTPQNQVDMLLQEM 156
Query: 615 ADEAGLELNMELPSGVPSTSIGTATVVSQEQDELTQRLARLR 490
ADEAGL+LNMELP G + S+GT +V S EQDEL+QRLARLR
Sbjct: 157 ADEAGLDLNMELPQG-QTGSVGT-SVASAEQDELSQRLARLR 196
>AF306520-1|AAL48200.1| 199|Homo sapiens C18orf2 protein.
Length = 199
Score = 135 bits (326), Expect = 2e-31
Identities = 70/102 (68%), Positives = 81/102 (79%)
Frame = -1
Query: 795 KAMDAAXKSMNLEKISTLMDKFESQFEDLDVQSSYMENAMSQTTTTTVPQGDVDNLLQQV 616
K+MDA K+MNLEKIS LMDKFE QFE LDVQ+ ME+ MS TTT T PQ VD LLQ++
Sbjct: 97 KSMDATLKTMNLEKISALMDKFEHQFETLDVQTQQMEDTMSSTTTLTTPQNQVDMLLQEM 156
Query: 615 ADEAGLELNMELPSGVPSTSIGTATVVSQEQDELTQRLARLR 490
ADEAGL+LNMELP G + S+GT +V S EQDEL+QRLARLR
Sbjct: 157 ADEAGLDLNMELPQG-QTGSVGT-SVASAEQDELSQRLARLR 196
>AF281064-1|AAG01449.1| 196|Homo sapiens CHMP1.5 protein.
Length = 196
Score = 135 bits (326), Expect = 2e-31
Identities = 70/102 (68%), Positives = 81/102 (79%)
Frame = -1
Query: 795 KAMDAAXKSMNLEKISTLMDKFESQFEDLDVQSSYMENAMSQTTTTTVPQGDVDNLLQQV 616
K+MDA K+MNLEKIS LMDKFE QFE LDVQ+ ME+ MS TTT T PQ VD LLQ++
Sbjct: 94 KSMDATLKTMNLEKISALMDKFEHQFETLDVQTQQMEDTMSSTTTLTTPQNQVDMLLQEM 153
Query: 615 ADEAGLELNMELPSGVPSTSIGTATVVSQEQDELTQRLARLR 490
ADEAGL+LNMELP G + S+GT +V S EQDEL+QRLARLR
Sbjct: 154 ADEAGLDLNMELPQG-QTGSVGT-SVASAEQDELSQRLARLR 193
>BT006841-1|AAP35487.1| 196|Homo sapiens procollagen (type III)
N-endopeptidase protein.
Length = 196
Score = 96.3 bits (229), Expect = 1e-19
Identities = 50/105 (47%), Positives = 78/105 (74%), Gaps = 3/105 (2%)
Frame = -1
Query: 795 KAMDAAXKSMNLEKISTLMDKFESQFEDLDVQSSYMENAMSQTTTTTVPQGDVDNLLQQV 616
KA+D A +M+L+K+S++MD+FE Q ++LDV +S ME++MS TT T PQ VD+L+ Q+
Sbjct: 94 KALDKALSTMDLQKVSSVMDRFEQQVQNLDVHTSVMEDSMSSATTLTTPQEQVDSLIMQI 153
Query: 615 ADEAGLEL---NMELPSGVPSTSIGTATVVSQEQDELTQRLARLR 490
A+E GLE+ +LP G ++++G ++V SQE D+L++RLA LR
Sbjct: 154 AEENGLEVLDQLSQLPEG--ASAVGESSVRSQE-DQLSRRLAALR 195
>BC132713-1|AAI32714.1| 196|Homo sapiens chromatin modifying
protein 1A protein.
Length = 196
Score = 96.3 bits (229), Expect = 1e-19
Identities = 50/105 (47%), Positives = 78/105 (74%), Gaps = 3/105 (2%)
Frame = -1
Query: 795 KAMDAAXKSMNLEKISTLMDKFESQFEDLDVQSSYMENAMSQTTTTTVPQGDVDNLLQQV 616
KA+D A +M+L+K+S++MD+FE Q ++LDV +S ME++MS TT T PQ VD+L+ Q+
Sbjct: 94 KALDKALSTMDLQKVSSVMDRFEQQVQNLDVHTSVMEDSMSSATTLTTPQEQVDSLIMQI 153
Query: 615 ADEAGLEL---NMELPSGVPSTSIGTATVVSQEQDELTQRLARLR 490
A+E GLE+ +LP G ++++G ++V SQE D+L++RLA LR
Sbjct: 154 AEENGLEVLDQLSQLPEG--ASAVGESSVRSQE-DQLSRRLAALR 195
>BC132711-1|AAI32712.1| 196|Homo sapiens chromatin modifying
protein 1A protein.
Length = 196
Score = 96.3 bits (229), Expect = 1e-19
Identities = 50/105 (47%), Positives = 78/105 (74%), Gaps = 3/105 (2%)
Frame = -1
Query: 795 KAMDAAXKSMNLEKISTLMDKFESQFEDLDVQSSYMENAMSQTTTTTVPQGDVDNLLQQV 616
KA+D A +M+L+K+S++MD+FE Q ++LDV +S ME++MS TT T PQ VD+L+ Q+
Sbjct: 94 KALDKALSTMDLQKVSSVMDRFEQQVQNLDVHTSVMEDSMSSATTLTTPQEQVDSLIMQI 153
Query: 615 ADEAGLEL---NMELPSGVPSTSIGTATVVSQEQDELTQRLARLR 490
A+E GLE+ +LP G ++++G ++V SQE D+L++RLA LR
Sbjct: 154 AEENGLEVLDQLSQLPEG--ASAVGESSVRSQE-DQLSRRLAALR 195
>AF281063-1|AAG01448.1| 196|Homo sapiens charged multivesicular
body protein 1/chromatin modifying protein 1 protein.
Length = 196
Score = 96.3 bits (229), Expect = 1e-19
Identities = 50/105 (47%), Positives = 78/105 (74%), Gaps = 3/105 (2%)
Frame = -1
Query: 795 KAMDAAXKSMNLEKISTLMDKFESQFEDLDVQSSYMENAMSQTTTTTVPQGDVDNLLQQV 616
KA+D A +M+L+K+S++MD+FE Q ++LDV +S ME++MS TT T PQ VD+L+ Q+
Sbjct: 94 KALDKALSTMDLQKVSSVMDRFEQQVQNLDVHTSVMEDSMSSATTLTTPQEQVDSLIMQI 153
Query: 615 ADEAGLEL---NMELPSGVPSTSIGTATVVSQEQDELTQRLARLR 490
A+E GLE+ +LP G ++++G ++V SQE D+L++RLA LR
Sbjct: 154 AEENGLEVLDQLSQLPEG--ASAVGESSVRSQE-DQLSRRLAALR 195
>BC010000-1|AAH10000.2| 68|Homo sapiens CHMP1A protein protein.
Length = 68
Score = 58.0 bits (134), Expect = 4e-08
Identities = 33/70 (47%), Positives = 50/70 (71%), Gaps = 3/70 (4%)
Frame = -1
Query: 690 MENAMSQTTTTTVPQGDVDNLLQQVADEAGLEL---NMELPSGVPSTSIGTATVVSQEQD 520
ME++MS TT T PQ VD+L+ Q+A+E GLE+ +LP G ++++G ++V SQE D
Sbjct: 1 MEDSMSSATTLTTPQEQVDSLIMQIAEENGLEVLDQLSQLPEG--ASAVGESSVRSQE-D 57
Query: 519 ELTQRLARLR 490
+L++RLA LR
Sbjct: 58 QLSRRLAALR 67
>CR457002-1|CAG33283.1| 222|Homo sapiens BC-2 protein.
Length = 222
Score = 48.0 bits (109), Expect = 4e-05
Identities = 29/88 (32%), Positives = 47/88 (53%)
Frame = -1
Query: 795 KAMDAAXKSMNLEKISTLMDKFESQFEDLDVQSSYMENAMSQTTTTTVPQGDVDNLLQQV 616
KAM + + L +I +M +FE Q E +D++ M +A+ + + D ++ QV
Sbjct: 108 KAMGTMNRQLKLPQIQKIMMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVSQV 167
Query: 615 ADEAGLELNMELPSGVPSTSIGTATVVS 532
DE GL L EL S +PST G+ +V +
Sbjct: 168 LDELGLSLTDEL-SNLPSTG-GSLSVAA 193
>BT007298-1|AAP35962.1| 222|Homo sapiens putative breast
adenocarcinoma marker (32kD) protein.
Length = 222
Score = 48.0 bits (109), Expect = 4e-05
Identities = 29/88 (32%), Positives = 47/88 (53%)
Frame = -1
Query: 795 KAMDAAXKSMNLEKISTLMDKFESQFEDLDVQSSYMENAMSQTTTTTVPQGDVDNLLQQV 616
KAM + + L +I +M +FE Q E +D++ M +A+ + + D ++ QV
Sbjct: 108 KAMGTMNRQLKLPQIQKIMMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVSQV 167
Query: 615 ADEAGLELNMELPSGVPSTSIGTATVVS 532
DE GL L EL S +PST G+ +V +
Sbjct: 168 LDELGLSLTDEL-SNLPSTG-GSLSVAA 193
>BC002502-1|AAH02502.1| 222|Homo sapiens chromatin modifying
protein 2A protein.
Length = 222
Score = 48.0 bits (109), Expect = 4e-05
Identities = 29/88 (32%), Positives = 47/88 (53%)
Frame = -1
Query: 795 KAMDAAXKSMNLEKISTLMDKFESQFEDLDVQSSYMENAMSQTTTTTVPQGDVDNLLQQV 616
KAM + + L +I +M +FE Q E +D++ M +A+ + + D ++ QV
Sbjct: 108 KAMGTMNRQLKLPQIQKIMMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVSQV 167
Query: 615 ADEAGLELNMELPSGVPSTSIGTATVVS 532
DE GL L EL S +PST G+ +V +
Sbjct: 168 LDELGLSLTDEL-SNLPSTG-GSLSVAA 193
>AY364248-1|AAQ76807.1| 222|Homo sapiens putative breast
adenocarcinoma marker protein.
Length = 222
Score = 48.0 bits (109), Expect = 4e-05
Identities = 29/88 (32%), Positives = 47/88 (53%)
Frame = -1
Query: 795 KAMDAAXKSMNLEKISTLMDKFESQFEDLDVQSSYMENAMSQTTTTTVPQGDVDNLLQQV 616
KAM + + L +I +M +FE Q E +D++ M +A+ + + D ++ QV
Sbjct: 108 KAMGTMNRQLKLPQIQKIMMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVSQV 167
Query: 615 ADEAGLELNMELPSGVPSTSIGTATVVS 532
DE GL L EL S +PST G+ +V +
Sbjct: 168 LDELGLSLTDEL-SNLPSTG-GSLSVAA 193
>AJ277113-1|CAC14310.1| 222|Homo sapiens BC-2 protein protein.
Length = 222
Score = 48.0 bits (109), Expect = 4e-05
Identities = 29/88 (32%), Positives = 47/88 (53%)
Frame = -1
Query: 795 KAMDAAXKSMNLEKISTLMDKFESQFEDLDVQSSYMENAMSQTTTTTVPQGDVDNLLQQV 616
KAM + + L +I +M +FE Q E +D++ M +A+ + + D ++ QV
Sbjct: 108 KAMGTMNRQLKLPQIQKIMMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVSQV 167
Query: 615 ADEAGLELNMELPSGVPSTSIGTATVVS 532
DE GL L EL S +PST G+ +V +
Sbjct: 168 LDELGLSLTDEL-SNLPSTG-GSLSVAA 193
>AF042384-1|AAC00005.1| 222|Homo sapiens BC-2 protein protein.
Length = 222
Score = 48.0 bits (109), Expect = 4e-05
Identities = 29/88 (32%), Positives = 47/88 (53%)
Frame = -1
Query: 795 KAMDAAXKSMNLEKISTLMDKFESQFEDLDVQSSYMENAMSQTTTTTVPQGDVDNLLQQV 616
KAM + + L +I +M +FE Q E +D++ M +A+ + + D ++ QV
Sbjct: 108 KAMGTMNRQLKLPQIQKIMMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVSQV 167
Query: 615 ADEAGLELNMELPSGVPSTSIGTATVVS 532
DE GL L EL S +PST G+ +V +
Sbjct: 168 LDELGLSLTDEL-SNLPSTG-GSLSVAA 193
>BC059404-1|AAH59404.1| 480|Homo sapiens B-cell CLL/lymphoma 6,
member B (zinc finger protein) protein.
Length = 480
Score = 31.1 bits (67), Expect = 5.0
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 684 SPCRTTGHPNPQTDSRTC 737
SP R+ GHP+P T+SR+C
Sbjct: 160 SPRRSEGHPDPPTESRSC 177
>AB076581-1|BAC00963.1| 480|Homo sapiens BAZF protein.
Length = 480
Score = 31.1 bits (67), Expect = 5.0
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 684 SPCRTTGHPNPQTDSRTC 737
SP R+ GHP+P T+SR+C
Sbjct: 160 SPRRSEGHPDPPTESRSC 177
>AB076580-1|BAC00962.1| 480|Homo sapiens BAZF protein.
Length = 480
Score = 31.1 bits (67), Expect = 5.0
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 684 SPCRTTGHPNPQTDSRTC 737
SP R+ GHP+P T+SR+C
Sbjct: 160 SPRRSEGHPDPPTESRSC 177
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,967,579
Number of Sequences: 237096
Number of extensions: 2071720
Number of successful extensions: 3696
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3692
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10259383312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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