Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc14c10
         (822 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060798-1|AAL28346.1|  203|Drosophila melanogaster GH26351p pro...   179   5e-45
AE014296-3046|AAF49241.2|  203|Drosophila melanogaster CG4108-PA...   179   5e-45
BT003747-1|AAO41408.1|  256|Drosophila melanogaster RH72336p pro...    46   5e-05
AY094715-1|AAM11068.1|  243|Drosophila melanogaster GH16325p pro...    46   5e-05
AE014297-3911|AAF56559.1|  256|Drosophila melanogaster CG14542-P...    46   5e-05

>AY060798-1|AAL28346.1|  203|Drosophila melanogaster GH26351p
           protein.
          Length = 203

 Score =  179 bits (435), Expect = 5e-45
 Identities = 89/105 (84%), Positives = 94/105 (89%)
 Frame = -1

Query: 795 KAMDAAXKSMNLEKISTLMDKFESQFEDLDVQSSYMENAMSQTTTTTVPQGDVDNLLQQV 616
           KAMDAA K MNLEKIS+LM+KFESQFEDLDVQSS ME  MS T TT+VPQGDVDNLLQQV
Sbjct: 99  KAMDAAMKGMNLEKISSLMEKFESQFEDLDVQSSVMEGTMSDTVTTSVPQGDVDNLLQQV 158

Query: 615 ADEAGLELNMELPSGVPSTSIGTATVVSQEQDELTQRLARLRQAE 481
           ADEAGLELNMELPSGV S S+G +T VSQEQDELTQRLARLRQAE
Sbjct: 159 ADEAGLELNMELPSGVQSQSVGASTAVSQEQDELTQRLARLRQAE 203


>AE014296-3046|AAF49241.2|  203|Drosophila melanogaster CG4108-PA
           protein.
          Length = 203

 Score =  179 bits (435), Expect = 5e-45
 Identities = 89/105 (84%), Positives = 94/105 (89%)
 Frame = -1

Query: 795 KAMDAAXKSMNLEKISTLMDKFESQFEDLDVQSSYMENAMSQTTTTTVPQGDVDNLLQQV 616
           KAMDAA K MNLEKIS+LM+KFESQFEDLDVQSS ME  MS T TT+VPQGDVDNLLQQV
Sbjct: 99  KAMDAAMKGMNLEKISSLMEKFESQFEDLDVQSSVMEGTMSDTVTTSVPQGDVDNLLQQV 158

Query: 615 ADEAGLELNMELPSGVPSTSIGTATVVSQEQDELTQRLARLRQAE 481
           ADEAGLELNMELPSGV S S+G +T VSQEQDELTQRLARLRQAE
Sbjct: 159 ADEAGLELNMELPSGVQSQSVGASTAVSQEQDELTQRLARLRQAE 203


>BT003747-1|AAO41408.1|  256|Drosophila melanogaster RH72336p
           protein.
          Length = 256

 Score = 46.4 bits (105), Expect = 5e-05
 Identities = 27/99 (27%), Positives = 50/99 (50%)
 Frame = -1

Query: 795 KAMDAAXKSMNLEKISTLMDKFESQFEDLDVQSSYMENAMSQTTTTTVPQGDVDNLLQQV 616
           KAM    + +NL +I  ++  FE Q E +D++   + +A+         + + D ++ QV
Sbjct: 108 KAMQNMNRQLNLPQIQKILQDFEKQSEMMDMKEEMINDAIDDAMEDEGDEEETDAVVSQV 167

Query: 615 ADEAGLELNMELPSGVPSTSIGTATVVSQEQDELTQRLA 499
            DE GL+L  +L   +PS S G+ ++      +  Q +A
Sbjct: 168 LDELGLQLGEQL-GDLPSAS-GSLSIAGGAGAQKAQAVA 204


>AY094715-1|AAM11068.1|  243|Drosophila melanogaster GH16325p
           protein.
          Length = 243

 Score = 46.4 bits (105), Expect = 5e-05
 Identities = 27/99 (27%), Positives = 50/99 (50%)
 Frame = -1

Query: 795 KAMDAAXKSMNLEKISTLMDKFESQFEDLDVQSSYMENAMSQTTTTTVPQGDVDNLLQQV 616
           KAM    + +NL +I  ++  FE Q E +D++   + +A+         + + D ++ QV
Sbjct: 95  KAMQNMNRQLNLPQIQKILQDFEKQSEMMDMKEEMINDAIDDAMEDEGDEEETDAVVSQV 154

Query: 615 ADEAGLELNMELPSGVPSTSIGTATVVSQEQDELTQRLA 499
            DE GL+L  +L   +PS S G+ ++      +  Q +A
Sbjct: 155 LDELGLQLGEQL-GDLPSAS-GSLSIAGGAGAQKAQAVA 191


>AE014297-3911|AAF56559.1|  256|Drosophila melanogaster CG14542-PA
           protein.
          Length = 256

 Score = 46.4 bits (105), Expect = 5e-05
 Identities = 27/99 (27%), Positives = 50/99 (50%)
 Frame = -1

Query: 795 KAMDAAXKSMNLEKISTLMDKFESQFEDLDVQSSYMENAMSQTTTTTVPQGDVDNLLQQV 616
           KAM    + +NL +I  ++  FE Q E +D++   + +A+         + + D ++ QV
Sbjct: 108 KAMQNMNRQLNLPQIQKILQDFEKQSEMMDMKEEMINDAIDDAMEDEGDEEETDAVVSQV 167

Query: 615 ADEAGLELNMELPSGVPSTSIGTATVVSQEQDELTQRLA 499
            DE GL+L  +L   +PS S G+ ++      +  Q +A
Sbjct: 168 LDELGLQLGEQL-GDLPSAS-GSLSIAGGAGAQKAQAVA 204


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,164,373
Number of Sequences: 53049
Number of extensions: 659347
Number of successful extensions: 1668
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1667
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3880595628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)