Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc14c09
         (174 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   0.66 
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   1.5  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   1.5  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    19   3.5  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    19   6.2  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    18   8.2  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    18   8.2  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 0.66
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 25  IYFFCY*FTFYSNTCY 72
           +  F Y FT+ S TCY
Sbjct: 133 LQLFLYIFTYLSVTCY 148


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 20.6 bits (41), Expect = 1.5
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 96  SHNFGLRIQISVGLAINNLWRIEE 167
           ++N  L I++     +NNL+RIEE
Sbjct: 186 TYNLSLGIKLRYD-DVNNLFRIEE 208


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 20.6 bits (41), Expect = 1.5
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 96  SHNFGLRIQISVGLAINNLWRIEE 167
           ++N  L I++     +NNL+RIEE
Sbjct: 186 TYNLSLGIKLRYD-DVNNLFRIEE 208


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = +2

Query: 29  IFSVINSLFIV-THVTFLVD--LTRLPQFWVKNSNFSRISYK 145
           I S +NS+F+V + VT ++   +    Q+   N NF  I  K
Sbjct: 18  IVSFVNSIFLVMSAVTIILSSLIFNQEQWSSLNKNFQFIDKK 59


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 18.6 bits (36), Expect = 6.2
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +2

Query: 92  RLPQFWVKNSNFSRI 136
           +LP FW   + F +I
Sbjct: 107 KLPYFWKMLTGFGKI 121


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 18.2 bits (35), Expect = 8.2
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -1

Query: 135 ILLKFEFLTQNCGSLVKSTKKVTCVTIKSELITEKI 28
           ILL+F  + ++C  L   ++K + V   S +  + I
Sbjct: 398 ILLRFLSVFESCTRLNNESRKPSFVIQFSHIPVDNI 433


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 18.2 bits (35), Expect = 8.2
 Identities = 7/33 (21%), Positives = 16/33 (48%)
 Frame = +2

Query: 17  VPVFIFSVINSLFIVTHVTFLVDLTRLPQFWVK 115
           V  F+F + + L  +  +    +  +L + W+K
Sbjct: 395 VDYFVFLLCSILVNIAFIKLATEWPQLMKAWLK 427


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,454
Number of Sequences: 336
Number of extensions: 441
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 37
effective length of database: 110,153
effective search space used:  2203060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)