Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc14c09
         (174 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    22   2.3  
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    22   2.3  
AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembran...    22   3.0  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    21   4.0  
AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenin...    21   4.0  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    21   4.0  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    21   5.3  

>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +2

Query: 5   AVVQVPVFIFSVINSLFIVTHVTFLVDLTRLP-QFWVKNSNFSRISYK*SLAY 160
           A V +  F  SV   L   T+ T+ VD+ RLP + W   +  S  +Y  S  Y
Sbjct: 147 AWVTITFFGESVKTVLDKATNETYTVDIPRLPIKSWYPWNAMSGPAYIFSFIY 199


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +2

Query: 5   AVVQVPVFIFSVINSLFIVTHVTFLVDLTRLP-QFWVKNSNFSRISYK*SLAY 160
           A V +  F  SV   L   T+ T+ VD+ RLP + W   +  S  +Y  S  Y
Sbjct: 147 AWVTITFFGESVKTVLDKATNETYTVDIPRLPIKSWYPWNAMSGPAYIFSFIY 199


>AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 331

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +2

Query: 11  VQVPVFIFSVINSLFIVTHVTFLVDLTRLP-QFWVKNSNFSRISYK*SLAY 160
           V +  F  SV   L   T+ T+ VD+ RLP + W   +  S  +Y  S  Y
Sbjct: 2   VTITFFGESVKTVLDKATNETYTVDIPRLPIKSWYPWNAMSGPAYIFSFIY 52


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 37  CY*FTFYSNTCYFLS 81
           C  FTF S+ C FLS
Sbjct: 192 CRFFTFSSSLCCFLS 206


>AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenine
           transaminase protein.
          Length = 396

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +3

Query: 99  HNFGLRIQISVGLAINNLWRI 161
           +NF L +Q  +G      WR+
Sbjct: 337 NNFSLEVQGGLGPTFGKAWRV 357


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -1

Query: 135 ILLKFEFLTQNCGSLVKSTKKVTC 64
           +L K  F+   CG+      KVTC
Sbjct: 795 LLPKLWFVASVCGARAMDIAKVTC 818


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydrogenase
            protein.
          Length = 1325

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 104  FWVKNSNFSRIS 139
            FWV  + FSR+S
Sbjct: 1106 FWVSKAYFSRVS 1117


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,946
Number of Sequences: 2352
Number of extensions: 1851
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 36
effective length of database: 479,307
effective search space used: 10065447
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)