Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc14c09
         (174 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX640951-1|CAE45975.1|  370|Homo sapiens hypothetical protein pr...    28   6.2  
BC100790-1|AAI00791.1|  284|Homo sapiens ADAMTSL1 protein protein.     28   6.2  
BC100788-1|AAI00789.1|  467|Homo sapiens ADAMTSL1 protein protein.     28   6.2  
AL591423-1|CAM13086.1| 1263|Homo sapiens ADAMTS-like 1 protein.        28   6.2  
AL353895-2|CAM20931.1| 1263|Homo sapiens ADAMTS-like 1 protein.        28   6.2  
AL158150-6|CAM14352.1| 1263|Homo sapiens ADAMTS-like 1 protein.        28   6.2  
AL158150-3|CAO03592.1|  463|Homo sapiens ADAMTS-like 1 protein.        28   6.2  

>BX640951-1|CAE45975.1|  370|Homo sapiens hypothetical protein
           protein.
          Length = 370

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = -1

Query: 111 TQNCGSLVKSTKKVTCVTIKSELITEKINTGTCT 10
           T++CG  V+ T++VTC  +K+  I+  ++   CT
Sbjct: 319 TRSCGGGVQ-TRRVTCQKLKASGISTPVSNDMCT 351


>BC100790-1|AAI00791.1|  284|Homo sapiens ADAMTSL1 protein protein.
          Length = 284

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = -1

Query: 111 TQNCGSLVKSTKKVTCVTIKSELITEKINTGTCT 10
           T++CG  V+ T++VTC  +K+  I+  ++   CT
Sbjct: 80  TRSCGGGVQ-TRRVTCQKLKASGISTPVSNDMCT 112


>BC100788-1|AAI00789.1|  467|Homo sapiens ADAMTSL1 protein protein.
          Length = 467

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = -1

Query: 111 TQNCGSLVKSTKKVTCVTIKSELITEKINTGTCT 10
           T++CG  V+ T++VTC  +K+  I+  ++   CT
Sbjct: 263 TRSCGGGVQ-TRRVTCQKLKASGISTPVSNDMCT 295


>AL591423-1|CAM13086.1| 1263|Homo sapiens ADAMTS-like 1 protein.
          Length = 1263

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = -1

Query: 111  TQNCGSLVKSTKKVTCVTIKSELITEKINTGTCT 10
            T++CG  V+ T++VTC  +K+  I+  ++   CT
Sbjct: 1059 TRSCGGGVQ-TRRVTCQKLKASGISTPVSNDMCT 1091


>AL353895-2|CAM20931.1| 1263|Homo sapiens ADAMTS-like 1 protein.
          Length = 1263

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = -1

Query: 111  TQNCGSLVKSTKKVTCVTIKSELITEKINTGTCT 10
            T++CG  V+ T++VTC  +K+  I+  ++   CT
Sbjct: 1059 TRSCGGGVQ-TRRVTCQKLKASGISTPVSNDMCT 1091


>AL158150-6|CAM14352.1| 1263|Homo sapiens ADAMTS-like 1 protein.
          Length = 1263

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = -1

Query: 111  TQNCGSLVKSTKKVTCVTIKSELITEKINTGTCT 10
            T++CG  V+ T++VTC  +K+  I+  ++   CT
Sbjct: 1059 TRSCGGGVQ-TRRVTCQKLKASGISTPVSNDMCT 1091


>AL158150-3|CAO03592.1|  463|Homo sapiens ADAMTS-like 1 protein.
          Length = 463

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = -1

Query: 111 TQNCGSLVKSTKKVTCVTIKSELITEKINTGTCT 10
           T++CG  V+ T++VTC  +K+  I+  ++   CT
Sbjct: 259 TRSCGGGVQ-TRRVTCQKLKASGISTPVSNDMCT 291


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,850,817
Number of Sequences: 237096
Number of extensions: 264656
Number of successful extensions: 333
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 333
length of database: 76,859,062
effective HSP length: 37
effective length of database: 68,086,510
effective search space used: 1361730200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)