Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14b17
(707 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR954256-10|CAJ14151.1| 548|Anopheles gambiae putative alkaline... 26 1.0
AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein p... 25 1.8
DQ139945-1|ABA29466.1| 399|Anopheles gambiae protein O-fucosylt... 25 3.1
AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subu... 25 3.1
EF426178-1|ABO26421.1| 155|Anopheles gambiae unknown protein. 24 5.4
EF426177-1|ABO26420.1| 155|Anopheles gambiae unknown protein. 24 5.4
EF426176-1|ABO26419.1| 155|Anopheles gambiae unknown protein. 24 5.4
EF426174-1|ABO26417.1| 155|Anopheles gambiae unknown protein. 24 5.4
EF426173-1|ABO26416.1| 155|Anopheles gambiae unknown protein. 24 5.4
EF426172-1|ABO26415.1| 155|Anopheles gambiae unknown protein. 24 5.4
EF426171-1|ABO26414.1| 155|Anopheles gambiae unknown protein. 24 5.4
EF426170-1|ABO26413.1| 155|Anopheles gambiae unknown protein. 24 5.4
EF426169-1|ABO26412.1| 155|Anopheles gambiae unknown protein. 24 5.4
EF426168-1|ABO26411.1| 155|Anopheles gambiae unknown protein. 24 5.4
EF426167-1|ABO26410.1| 155|Anopheles gambiae unknown protein. 24 5.4
EF426166-1|ABO26409.1| 155|Anopheles gambiae unknown protein. 24 5.4
EF426165-1|ABO26408.1| 155|Anopheles gambiae unknown protein. 24 5.4
EF426164-1|ABO26407.1| 155|Anopheles gambiae unknown protein. 24 5.4
EF426163-1|ABO26406.1| 155|Anopheles gambiae unknown protein. 24 5.4
EF426162-1|ABO26405.1| 155|Anopheles gambiae unknown protein. 24 5.4
EF426161-1|ABO26404.1| 155|Anopheles gambiae unknown protein. 24 5.4
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 23 7.1
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 23 9.4
>CR954256-10|CAJ14151.1| 548|Anopheles gambiae putative alkaline
phosphatase protein.
Length = 548
Score = 26.2 bits (55), Expect = 1.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 150 LFSTTHVPHHVKADAQVRQQLNMSHST 70
LFS+ H+P+H+ AD Q L+ ST
Sbjct: 333 LFSSKHLPYHLDADEQQIPTLSEMVST 359
>AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein
protein.
Length = 468
Score = 25.4 bits (53), Expect = 1.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 368 TGLPAVRIRPLAGPPWRPVRTSEQALQRCTGNEKEERIE 252
+G+P +R AG V + + LQR EKEE+++
Sbjct: 27 SGIPTLRAPMAAGNAGSVVSKTVEDLQRSLAAEKEEKMK 65
>DQ139945-1|ABA29466.1| 399|Anopheles gambiae protein
O-fucosyltransferase 1 protein.
Length = 399
Score = 24.6 bits (51), Expect = 3.1
Identities = 11/36 (30%), Positives = 15/36 (41%)
Frame = +1
Query: 277 PVQRCRACSEVRTGLQGGPANGRIRTAGRPVRRCWN 384
P +R C R GL G +G +G P W+
Sbjct: 108 PAERISFCYTERMGLDGSTGHGCNAKSGNPFGPFWD 143
>AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subunit
protein.
Length = 837
Score = 24.6 bits (51), Expect = 3.1
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1
Query: 458 GRYTYVHCEGLPTC 417
GRYT +CE PTC
Sbjct: 664 GRYTGRYCEKCPTC 677
Score = 23.4 bits (48), Expect = 7.1
Identities = 15/56 (26%), Positives = 20/56 (35%)
Frame = -1
Query: 581 CSAPSHGACIXXXXXXXXXSCGWYXRCAEQTSWSRFRRVPGGRYTYVHCEGLPTCQ 414
CS P HG C+ GW + + + PGG C G TC+
Sbjct: 603 CSGPDHGRCVCGQCECRE---GWTGPACDCRASNETCMPPGGGEL---CSGHGTCE 652
>EF426178-1|ABO26421.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 23.8 bits (49), Expect = 5.4
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 696 CVVLDSTXMM*HSIXMPSIEVVAKSFQQLEDACTHV 589
C +M HS+ +P A+S QQLE AC V
Sbjct: 50 CTSASQMSIMGHSLFLP-----AESRQQLEPACVSV 80
>EF426177-1|ABO26420.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 23.8 bits (49), Expect = 5.4
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 696 CVVLDSTXMM*HSIXMPSIEVVAKSFQQLEDACTHV 589
C +M HS+ +P A+S QQLE AC V
Sbjct: 50 CTSASQMSIMGHSLFLP-----AESRQQLEPACVSV 80
>EF426176-1|ABO26419.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 23.8 bits (49), Expect = 5.4
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 696 CVVLDSTXMM*HSIXMPSIEVVAKSFQQLEDACTHV 589
C +M HS+ +P A+S QQLE AC V
Sbjct: 50 CTSASQMSIMGHSLFLP-----AESRQQLEPACVSV 80
>EF426174-1|ABO26417.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 23.8 bits (49), Expect = 5.4
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 696 CVVLDSTXMM*HSIXMPSIEVVAKSFQQLEDACTHV 589
C +M HS+ +P A+S QQLE AC V
Sbjct: 50 CTSASQMSIMGHSLFLP-----AESRQQLEPACVSV 80
>EF426173-1|ABO26416.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 23.8 bits (49), Expect = 5.4
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 696 CVVLDSTXMM*HSIXMPSIEVVAKSFQQLEDACTHV 589
C +M HS+ +P A+S QQLE AC V
Sbjct: 50 CTSASQMSIMGHSLFLP-----AESRQQLEPACVSV 80
>EF426172-1|ABO26415.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 23.8 bits (49), Expect = 5.4
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 696 CVVLDSTXMM*HSIXMPSIEVVAKSFQQLEDACTHV 589
C +M HS+ +P A+S QQLE AC V
Sbjct: 50 CTSASQMSIMGHSLFLP-----AESRQQLEPACVSV 80
>EF426171-1|ABO26414.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 23.8 bits (49), Expect = 5.4
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 696 CVVLDSTXMM*HSIXMPSIEVVAKSFQQLEDACTHV 589
C +M HS+ +P A+S QQLE AC V
Sbjct: 50 CTSASQMSIMGHSLFLP-----AESRQQLEPACVSV 80
>EF426170-1|ABO26413.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 23.8 bits (49), Expect = 5.4
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 696 CVVLDSTXMM*HSIXMPSIEVVAKSFQQLEDACTHV 589
C +M HS+ +P A+S QQLE AC V
Sbjct: 50 CTSASQMSIMGHSLFLP-----AESRQQLEPACVSV 80
>EF426169-1|ABO26412.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 23.8 bits (49), Expect = 5.4
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 696 CVVLDSTXMM*HSIXMPSIEVVAKSFQQLEDACTHV 589
C +M HS+ +P A+S QQLE AC V
Sbjct: 50 CTSASQMSIMGHSLFLP-----AESRQQLEPACVSV 80
>EF426168-1|ABO26411.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 23.8 bits (49), Expect = 5.4
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 696 CVVLDSTXMM*HSIXMPSIEVVAKSFQQLEDACTHV 589
C +M HS+ +P A+S QQLE AC V
Sbjct: 50 CTSASQMSIMGHSLFLP-----AESRQQLEPACVSV 80
>EF426167-1|ABO26410.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 23.8 bits (49), Expect = 5.4
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 696 CVVLDSTXMM*HSIXMPSIEVVAKSFQQLEDACTHV 589
C +M HS+ +P A+S QQLE AC V
Sbjct: 50 CTSASQMSIMGHSLFLP-----AESRQQLEPACVSV 80
>EF426166-1|ABO26409.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 23.8 bits (49), Expect = 5.4
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 696 CVVLDSTXMM*HSIXMPSIEVVAKSFQQLEDACTHV 589
C +M HS+ +P A+S QQLE AC V
Sbjct: 50 CTSASQMSIMGHSLFLP-----AESRQQLEPACVSV 80
>EF426165-1|ABO26408.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 23.8 bits (49), Expect = 5.4
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 696 CVVLDSTXMM*HSIXMPSIEVVAKSFQQLEDACTHV 589
C +M HS+ +P A+S QQLE AC V
Sbjct: 50 CTSASQMSIMGHSLFLP-----AESRQQLEPACVSV 80
>EF426164-1|ABO26407.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 23.8 bits (49), Expect = 5.4
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 696 CVVLDSTXMM*HSIXMPSIEVVAKSFQQLEDACTHV 589
C +M HS+ +P A+S QQLE AC V
Sbjct: 50 CTSASQMSIMGHSLFLP-----AESRQQLEPACVSV 80
>EF426163-1|ABO26406.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 23.8 bits (49), Expect = 5.4
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 696 CVVLDSTXMM*HSIXMPSIEVVAKSFQQLEDACTHV 589
C +M HS+ +P A+S QQLE AC V
Sbjct: 50 CTSASQMSIMGHSLFLP-----AESRQQLEPACVSV 80
>EF426162-1|ABO26405.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 23.8 bits (49), Expect = 5.4
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 696 CVVLDSTXMM*HSIXMPSIEVVAKSFQQLEDACTHV 589
C +M HS+ +P A+S QQLE AC V
Sbjct: 50 CTSASQMSIMGHSLFLP-----AESRQQLEPACVSV 80
>EF426161-1|ABO26404.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 23.8 bits (49), Expect = 5.4
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 696 CVVLDSTXMM*HSIXMPSIEVVAKSFQQLEDACTHV 589
C +M HS+ +P A+S QQLE AC V
Sbjct: 50 CTSASQMSIMGHSLFLP-----AESRQQLEPACVSV 80
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 23.4 bits (48), Expect = 7.1
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -3
Query: 432 RPTYLSMSRSVLL-PICVPTPADRPSRSAYSTIGRSSLETRANLRASPT 289
RP L+ S L P +P A RP + + RS+ + RAN + T
Sbjct: 586 RPNALASPASPLKSPSKIPGLARRPENISSESRSRSTSKQRANAKTPET 634
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 23.0 bits (47), Expect = 9.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 196 KQIKIRIYTESASRMFIFNN 137
KQ+ I + TES +F FNN
Sbjct: 187 KQLAIALRTESKLMLFRFNN 206
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 778,382
Number of Sequences: 2352
Number of extensions: 17800
Number of successful extensions: 46
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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