Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14b17
(707 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15805-1|CAA33804.1| 844|Drosophila melanogaster protein ( Dros... 326 2e-89
AY075481-1|AAL68292.1| 844|Drosophila melanogaster RE38659p pro... 326 2e-89
AE014134-3534|AAN11135.1| 832|Drosophila melanogaster CG2238-PC... 326 2e-89
AE014134-3533|AAG22125.2| 832|Drosophila melanogaster CG2238-PB... 326 2e-89
AE014134-3532|AAF57226.2| 844|Drosophila melanogaster CG2238-PA... 326 2e-89
AY089551-1|AAL90289.1| 975|Drosophila melanogaster LD28793p pro... 154 1e-37
AE014297-4212|AAF56769.1| 975|Drosophila melanogaster CG4849-PA... 154 1e-37
AY058769-1|AAL13998.1| 949|Drosophila melanogaster SD04694p pro... 76 5e-14
AE014296-2740|AAF49461.3| 1033|Drosophila melanogaster CG33158-P... 76 5e-14
AE014134-1251|AAF52495.2| 745|Drosophila melanogaster CG4567-PA... 50 4e-06
AE014297-3196|AAF56031.2| 692|Drosophila melanogaster CG31159-P... 44 2e-04
BT025849-1|ABF85749.1| 407|Drosophila melanogaster IP14878p pro... 29 8.2
AF533773-1|AAN04479.1| 539|Drosophila melanogaster Wnt4 protein... 29 8.2
AE014298-3188|AAN09569.1| 1751|Drosophila melanogaster CG14616-P... 29 8.2
>X15805-1|CAA33804.1| 844|Drosophila melanogaster protein (
Drosophila DMEF2 genefor the translation elongation
factor 2. ).
Length = 844
Score = 326 bits (800), Expect = 2e-89
Identities = 146/162 (90%), Positives = 153/162 (94%)
Frame = -2
Query: 697 LRGVRFNXYDVTLHXDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAV 518
LRGVRFN YDVTLH DAIHRGGGQIIPTTRRCLYA +TA+PRLMEPVYLCEIQCPEVAV
Sbjct: 683 LRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCLYAAAITAKPRLMEPVYLCEIQCPEVAV 742
Query: 517 GGXYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDH 338
GG YGVLNRRRGHVFEE+QV GTPMF+VKAYLPVNESFGFTADLRSNTGGQAFPQCVFDH
Sbjct: 743 GGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDH 802
Query: 337 WQVLPGDPCEPQSKPYNVVQETRKRKGLKEGLPDLTQYLDKL 212
WQVLPGDP EP SKPY +VQ+TRKRKGLKEGLPDL+QYLDKL
Sbjct: 803 WQVLPGDPSEPSSKPYAIVQDTRKRKGLKEGLPDLSQYLDKL 844
>AY075481-1|AAL68292.1| 844|Drosophila melanogaster RE38659p protein.
Length = 844
Score = 326 bits (800), Expect = 2e-89
Identities = 146/162 (90%), Positives = 153/162 (94%)
Frame = -2
Query: 697 LRGVRFNXYDVTLHXDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAV 518
LRGVRFN YDVTLH DAIHRGGGQIIPTTRRCLYA +TA+PRLMEPVYLCEIQCPEVAV
Sbjct: 683 LRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCLYAAAITAKPRLMEPVYLCEIQCPEVAV 742
Query: 517 GGXYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDH 338
GG YGVLNRRRGHVFEE+QV GTPMF+VKAYLPVNESFGFTADLRSNTGGQAFPQCVFDH
Sbjct: 743 GGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDH 802
Query: 337 WQVLPGDPCEPQSKPYNVVQETRKRKGLKEGLPDLTQYLDKL 212
WQVLPGDP EP SKPY +VQ+TRKRKGLKEGLPDL+QYLDKL
Sbjct: 803 WQVLPGDPSEPSSKPYAIVQDTRKRKGLKEGLPDLSQYLDKL 844
>AE014134-3534|AAN11135.1| 832|Drosophila melanogaster CG2238-PC,
isoform C protein.
Length = 832
Score = 326 bits (800), Expect = 2e-89
Identities = 146/162 (90%), Positives = 153/162 (94%)
Frame = -2
Query: 697 LRGVRFNXYDVTLHXDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAV 518
LRGVRFN YDVTLH DAIHRGGGQIIPTTRRCLYA +TA+PRLMEPVYLCEIQCPEVAV
Sbjct: 671 LRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCLYAAAITAKPRLMEPVYLCEIQCPEVAV 730
Query: 517 GGXYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDH 338
GG YGVLNRRRGHVFEE+QV GTPMF+VKAYLPVNESFGFTADLRSNTGGQAFPQCVFDH
Sbjct: 731 GGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDH 790
Query: 337 WQVLPGDPCEPQSKPYNVVQETRKRKGLKEGLPDLTQYLDKL 212
WQVLPGDP EP SKPY +VQ+TRKRKGLKEGLPDL+QYLDKL
Sbjct: 791 WQVLPGDPSEPSSKPYAIVQDTRKRKGLKEGLPDLSQYLDKL 832
>AE014134-3533|AAG22125.2| 832|Drosophila melanogaster CG2238-PB,
isoform B protein.
Length = 832
Score = 326 bits (800), Expect = 2e-89
Identities = 146/162 (90%), Positives = 153/162 (94%)
Frame = -2
Query: 697 LRGVRFNXYDVTLHXDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAV 518
LRGVRFN YDVTLH DAIHRGGGQIIPTTRRCLYA +TA+PRLMEPVYLCEIQCPEVAV
Sbjct: 671 LRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCLYAAAITAKPRLMEPVYLCEIQCPEVAV 730
Query: 517 GGXYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDH 338
GG YGVLNRRRGHVFEE+QV GTPMF+VKAYLPVNESFGFTADLRSNTGGQAFPQCVFDH
Sbjct: 731 GGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDH 790
Query: 337 WQVLPGDPCEPQSKPYNVVQETRKRKGLKEGLPDLTQYLDKL 212
WQVLPGDP EP SKPY +VQ+TRKRKGLKEGLPDL+QYLDKL
Sbjct: 791 WQVLPGDPSEPSSKPYAIVQDTRKRKGLKEGLPDLSQYLDKL 832
>AE014134-3532|AAF57226.2| 844|Drosophila melanogaster CG2238-PA,
isoform A protein.
Length = 844
Score = 326 bits (800), Expect = 2e-89
Identities = 146/162 (90%), Positives = 153/162 (94%)
Frame = -2
Query: 697 LRGVRFNXYDVTLHXDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAV 518
LRGVRFN YDVTLH DAIHRGGGQIIPTTRRCLYA +TA+PRLMEPVYLCEIQCPEVAV
Sbjct: 683 LRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCLYAAAITAKPRLMEPVYLCEIQCPEVAV 742
Query: 517 GGXYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDH 338
GG YGVLNRRRGHVFEE+QV GTPMF+VKAYLPVNESFGFTADLRSNTGGQAFPQCVFDH
Sbjct: 743 GGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDH 802
Query: 337 WQVLPGDPCEPQSKPYNVVQETRKRKGLKEGLPDLTQYLDKL 212
WQVLPGDP EP SKPY +VQ+TRKRKGLKEGLPDL+QYLDKL
Sbjct: 803 WQVLPGDPSEPSSKPYAIVQDTRKRKGLKEGLPDLSQYLDKL 844
>AY089551-1|AAL90289.1| 975|Drosophila melanogaster LD28793p protein.
Length = 975
Score = 154 bits (374), Expect = 1e-37
Identities = 77/172 (44%), Positives = 107/172 (62%), Gaps = 12/172 (6%)
Frame = -2
Query: 697 LRGVRFNXYDVTLHXDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAV 518
+R V+F D + +A+HRGGGQIIPT RR Y+ L A PRLMEP E+Q P V
Sbjct: 787 IRNVKFKILDGVIANEALHRGGGQIIPTARRVAYSAFLMATPRLMEPYLFVEVQAPADCV 846
Query: 517 GGXYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDH 338
Y VL RRRGHV +++ V+G+P++ +KA++P +SFGF DLR++T GQAF VF H
Sbjct: 847 SAVYTVLARRRGHVTQDAPVSGSPIYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHH 906
Query: 337 WQVLPGD---------PCEPQSKPY---NVVQETRKRKGLKEGLPDLTQYLD 218
WQ++PGD P EPQ + + +TR+RKGL E + + ++ D
Sbjct: 907 WQIVPGDPLDKSIIIRPLEPQQASHLAREFMIKTRRRKGLSEDV-SINKFFD 957
>AE014297-4212|AAF56769.1| 975|Drosophila melanogaster CG4849-PA
protein.
Length = 975
Score = 154 bits (374), Expect = 1e-37
Identities = 77/172 (44%), Positives = 107/172 (62%), Gaps = 12/172 (6%)
Frame = -2
Query: 697 LRGVRFNXYDVTLHXDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAV 518
+R V+F D + +A+HRGGGQIIPT RR Y+ L A PRLMEP E+Q P V
Sbjct: 787 IRNVKFKILDGVIANEALHRGGGQIIPTARRVAYSAFLMATPRLMEPYLFVEVQAPADCV 846
Query: 517 GGXYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDH 338
Y VL RRRGHV +++ V+G+P++ +KA++P +SFGF DLR++T GQAF VF H
Sbjct: 847 SAVYTVLARRRGHVTQDAPVSGSPIYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHH 906
Query: 337 WQVLPGD---------PCEPQSKPY---NVVQETRKRKGLKEGLPDLTQYLD 218
WQ++PGD P EPQ + + +TR+RKGL E + + ++ D
Sbjct: 907 WQIVPGDPLDKSIIIRPLEPQQASHLAREFMIKTRRRKGLSEDV-SINKFFD 957
>AY058769-1|AAL13998.1| 949|Drosophila melanogaster SD04694p protein.
Length = 949
Score = 75.8 bits (178), Expect = 5e-14
Identities = 36/106 (33%), Positives = 50/106 (47%)
Frame = -2
Query: 631 GQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGXYGVLNRRRGHVFEESQVAG 452
GQ++ + RL+ P+Y C I +G Y V+ RR G + G
Sbjct: 788 GQVLTAAKEVCRQAFQNQPQRLVTPMYSCNIVVNAEMLGKMYAVIGRRHGKILSGDLTQG 847
Query: 451 TPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP 314
+ F V LPV ESF F ++R T G A PQ +F HW+V+ DP
Sbjct: 848 SGNFAVTCLLPVIESFNFAQEMRKQTSGLACPQLMFSHWEVIDIDP 893
>AE014296-2740|AAF49461.3| 1033|Drosophila melanogaster CG33158-PB
protein.
Length = 1033
Score = 75.8 bits (178), Expect = 5e-14
Identities = 36/106 (33%), Positives = 50/106 (47%)
Frame = -2
Query: 631 GQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGXYGVLNRRRGHVFEESQVAG 452
GQ++ + RL+ P+Y C I +G Y V+ RR G + G
Sbjct: 872 GQVLTAAKEVCRQAFQNQPQRLVTPMYSCNIVVNAEMLGKMYAVIGRRHGKILSGDLTQG 931
Query: 451 TPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP 314
+ F V LPV ESF F ++R T G A PQ +F HW+V+ DP
Sbjct: 932 SGNFAVTCLLPVIESFNFAQEMRKQTSGLACPQLMFSHWEVIDIDP 977
>AE014134-1251|AAF52495.2| 745|Drosophila melanogaster CG4567-PA
protein.
Length = 745
Score = 49.6 bits (113), Expect = 4e-06
Identities = 30/108 (27%), Positives = 55/108 (50%)
Frame = -2
Query: 571 RLMEPVYLCEIQCPEVAVGGXYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTA 392
+++EP+ L E+ PE G G L++R G + G F V A +P+N+ FG+
Sbjct: 638 QILEPIMLVEVTAPEEFQGAVMGHLSKRHGIITGTEGTEG--WFTVYAEVPLNDMFGYAG 695
Query: 391 DLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKE 248
+LRS+T G+ + + PC P + +V++ ++ +GL +
Sbjct: 696 ELRSSTQGKGEFTMEYSRY-----SPCLPDVQD-QIVRQYQESQGLAQ 737
>AE014297-3196|AAF56031.2| 692|Drosophila melanogaster CG31159-PA
protein.
Length = 692
Score = 44.0 bits (99), Expect = 2e-04
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Frame = -2
Query: 667 VTLHXDAIHRGGGQ--IIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGXYGVLN 494
+ LH I RG ++ T +C+ L T+ RL+EP+ +I P + G L+
Sbjct: 562 IRLHNATIGRGTADSFVMATAAQCVQKLLSTSGTRLLEPIMALQIVAPSERISGIMADLS 621
Query: 493 RRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQA 362
RRR + + G ++ P+ E G+++ LR+ + G A
Sbjct: 622 RRRA-LINDVLPKGERNKMILVNAPLAELSGYSSALRTISSGTA 664
>BT025849-1|ABF85749.1| 407|Drosophila melanogaster IP14878p
protein.
Length = 407
Score = 28.7 bits (61), Expect = 8.2
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -3
Query: 162 LHACLFSTTHVPHHVKADAQVRQQLNMSHST 70
LHA + PHH++ DA++R+ N++ ST
Sbjct: 212 LHASINLPAAGPHHLRQDARLRKFENLTQST 242
>AF533773-1|AAN04479.1| 539|Drosophila melanogaster Wnt4 protein
protein.
Length = 539
Score = 28.7 bits (61), Expect = 8.2
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2
Query: 362 GLSAGVGTQIGSKTERLIDR*VGLHNEHRCTCH 460
G +AG+G +IGS T + D GL+NEH + H
Sbjct: 193 GGAAGMGLRIGSNTNNM-DMQQGLYNEHFISEH 224
>AE014298-3188|AAN09569.1| 1751|Drosophila melanogaster CG14616-PC,
isoform C protein.
Length = 1751
Score = 28.7 bits (61), Expect = 8.2
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -3
Query: 162 LHACLFSTTHVPHHVKADAQVRQQLNMSHST 70
LHA + PHH++ DA++R+ N++ ST
Sbjct: 1556 LHASINLPAAGPHHLRQDARLRKFENLTQST 1586
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,170,710
Number of Sequences: 53049
Number of extensions: 730269
Number of successful extensions: 1851
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1850
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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