Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc14b13
         (753 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021424-1|AAX33572.1| 1227|Drosophila melanogaster LD01809p pro...    29   5.2  
BT021338-1|AAX33486.1| 1227|Drosophila melanogaster RE01065p pro...    29   5.2  
AY069239-1|AAL39384.1|  688|Drosophila melanogaster GM01240p pro...    29   5.2  
AE014297-727|AAF54213.2| 1667|Drosophila melanogaster CG9626-PA ...    29   5.2  
AE014296-140|AAN11452.1|  688|Drosophila melanogaster CG13900-PB...    29   5.2  
AE014296-139|AAF47416.2| 1227|Drosophila melanogaster CG13900-PA...    29   5.2  

>BT021424-1|AAX33572.1| 1227|Drosophila melanogaster LD01809p protein.
          Length = 1227

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +1

Query: 112  LFYKSIEDLIFKFRYKDAENHL-IFALTYHPKDYKFNELLKY 234
            ++   +++ +F  RY+ AEN L IFA   HP+      LL Y
Sbjct: 1010 VYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDY 1051


>BT021338-1|AAX33486.1| 1227|Drosophila melanogaster RE01065p protein.
          Length = 1227

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +1

Query: 112  LFYKSIEDLIFKFRYKDAENHL-IFALTYHPKDYKFNELLKY 234
            ++   +++ +F  RY+ AEN L IFA   HP+      LL Y
Sbjct: 1010 VYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDY 1051


>AY069239-1|AAL39384.1|  688|Drosophila melanogaster GM01240p
           protein.
          Length = 688

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +1

Query: 112 LFYKSIEDLIFKFRYKDAENHL-IFALTYHPKDYKFNELLKY 234
           ++   +++ +F  RY+ AEN L IFA   HP+      LL Y
Sbjct: 471 VYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDY 512


>AE014297-727|AAF54213.2| 1667|Drosophila melanogaster CG9626-PA
           protein.
          Length = 1667

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
 Frame = -2

Query: 740 EDSFPIVNDQEVMDVYLVANLKP-TRP----NRXYKFLAQHALRWEEDYVPHEVI 591
           E    +V+D +V     VAN  P T+P    N  ++F  +H+L W E  +  EV+
Sbjct: 140 EAELTVVDDDDVPSTSQVANQHPPTKPPRSNNTDHQFDLEHSLTWLESLMGTEVV 194


>AE014296-140|AAN11452.1|  688|Drosophila melanogaster CG13900-PB,
           isoform B protein.
          Length = 688

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +1

Query: 112 LFYKSIEDLIFKFRYKDAENHL-IFALTYHPKDYKFNELLKY 234
           ++   +++ +F  RY+ AEN L IFA   HP+      LL Y
Sbjct: 471 VYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDY 512


>AE014296-139|AAF47416.2| 1227|Drosophila melanogaster CG13900-PA,
            isoform A protein.
          Length = 1227

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +1

Query: 112  LFYKSIEDLIFKFRYKDAENHL-IFALTYHPKDYKFNELLKY 234
            ++   +++ +F  RY+ AEN L IFA   HP+      LL Y
Sbjct: 1010 VYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDY 1051


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,428,298
Number of Sequences: 53049
Number of extensions: 605996
Number of successful extensions: 1197
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1197
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)