Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14b09
(370 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0ZD84 Cluster: Ribosomal protein S26; n=9; Coelomata|R... 179 1e-44
UniRef50_Q5JNZ5 Cluster: 40S ribosomal protein S26-like 1; n=110... 162 2e-39
UniRef50_Q8LPJ7 Cluster: 40S ribosomal protein S26-2; n=4; Eukar... 158 3e-38
UniRef50_P39938 Cluster: 40S ribosomal protein S26-A; n=68; Euka... 150 7e-36
UniRef50_UPI000049A1F9 Cluster: 40S ribosomal protein S26; n=4; ... 146 9e-35
UniRef50_UPI0000E1F674 Cluster: PREDICTED: similar to 40S riboso... 123 1e-27
UniRef50_Q5MGL0 Cluster: Ribosomal protein S26e; n=1; Lonomia ob... 120 8e-27
UniRef50_A2DST7 Cluster: 40S ribosomal protein S26, putative; n=... 119 1e-26
UniRef50_Q9BHU1 Cluster: 40S ribosomal protein S26; n=1; Sterkie... 117 8e-26
UniRef50_Q23PT4 Cluster: Ribosomal protein S26e containing prote... 116 2e-25
UniRef50_UPI00001CB188 Cluster: UPI00001CB188 related cluster; n... 113 1e-24
UniRef50_UPI00005A1FB7 Cluster: PREDICTED: similar to 40S riboso... 111 3e-24
UniRef50_Q4Q6X0 Cluster: Ribosomal protein s26, putative; n=6; T... 109 1e-23
UniRef50_Q9AW37 Cluster: 40S ribosomal protein S26; n=1; Guillar... 104 6e-22
UniRef50_Q01E61 Cluster: Ribosomal protein S26, cytosolic; n=2; ... 103 1e-21
UniRef50_Q8SRN2 Cluster: 40S RIBOSOMAL PROTEIN S26; n=2; Apanspo... 99 3e-20
UniRef50_Q3LVZ2 Cluster: Ribosomal protein S26; n=1; Bigelowiell... 81 6e-15
UniRef50_UPI0000DA2056 Cluster: PREDICTED: similar to Ankyrin re... 67 1e-10
UniRef50_A3H8X5 Cluster: Ribosomal protein S26E; n=2; Thermoprot... 60 2e-08
UniRef50_UPI0000DC1C52 Cluster: UPI0000DC1C52 related cluster; n... 56 2e-07
UniRef50_Q05DX2 Cluster: 30S ribosomal protein S26e; n=5; Crenar... 55 5e-07
UniRef50_Q8ZVQ6 Cluster: Ribosomal protein S26; n=10; Thermoprot... 54 6e-07
UniRef50_Q6CS02 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 47 1e-04
UniRef50_Q8TZ16 Cluster: Zn-ribbon containing protein; n=1; Meth... 36 0.18
UniRef50_Q74N49 Cluster: NEQ043; n=1; Nanoarchaeum equitans|Rep:... 34 0.95
UniRef50_A5GMY9 Cluster: Aldo/keto reductase family protein; n=2... 33 1.7
UniRef50_UPI0000499B8D Cluster: hypothetical protein 53.t00011; ... 33 2.2
UniRef50_Q4N3J4 Cluster: Putative uncharacterized protein; n=1; ... 32 3.8
UniRef50_Q9BHL4 Cluster: Putative uncharacterized protein; n=3; ... 31 5.1
UniRef50_Q7RHF5 Cluster: Putative uncharacterized protein PY0403... 31 5.1
UniRef50_UPI0000F2DC53 Cluster: PREDICTED: similar to Zinc finge... 31 6.7
UniRef50_UPI0000DA2FA4 Cluster: PREDICTED: similar to Guanine nu... 31 8.9
UniRef50_Q0DMD4 Cluster: Os03g0816200 protein; n=2; Oryza sativa... 31 8.9
UniRef50_A7P6R9 Cluster: Chromosome chr9 scaffold_7, whole genom... 31 8.9
UniRef50_Q6C327 Cluster: Yarrowia lipolytica chromosome F of str... 31 8.9
UniRef50_Q92570 Cluster: Orphan nuclear receptor NR4A3; n=26; Eu... 31 8.9
UniRef50_P28818 Cluster: Guanine nucleotide-releasing protein; n... 31 8.9
>UniRef50_Q0ZD84 Cluster: Ribosomal protein S26; n=9; Coelomata|Rep:
Ribosomal protein S26 - Pectinaria gouldii (Trumpet
worm) (Ice-cream cone worm)
Length = 109
Score = 179 bits (436), Expect = 1e-44
Identities = 83/109 (76%), Positives = 93/109 (85%)
Frame = -2
Query: 327 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 148
MT+KRRN GR+K GRGH + VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASVY
Sbjct: 1 MTKKRRNNGRSKKGRGHTRPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVYE 60
Query: 147 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRP 1
+ LPKLYAKLHYCVSCAIHSKVVRNRS++ R+ RTPP P M +P
Sbjct: 61 GYPLPKLYAKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFKPGAMRKP 109
>UniRef50_Q5JNZ5 Cluster: 40S ribosomal protein S26-like 1; n=110;
Fungi/Metazoa group|Rep: 40S ribosomal protein S26-like
1 - Homo sapiens (Human)
Length = 115
Score = 162 bits (393), Expect = 2e-39
Identities = 73/98 (74%), Positives = 83/98 (84%)
Frame = -2
Query: 327 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 148
MT+KRRN AK GRGHV+ +RCTNC RCVP DKAIKKFVIRNIVEAAAVRDI++ SV+
Sbjct: 1 MTKKRRNNSHAKKGRGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFD 60
Query: 147 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 34
+ LPKLY KLHYCVSCAIHSKVVRNRS++ + RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREACKDRTPP 98
>UniRef50_Q8LPJ7 Cluster: 40S ribosomal protein S26-2; n=4;
Eukaryota|Rep: 40S ribosomal protein S26-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 158 bits (383), Expect = 3e-38
Identities = 68/98 (69%), Positives = 81/98 (82%)
Frame = -2
Query: 327 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 148
MT KRRNGGR KH RGHV +RC+NC +C PKDKAIK+F++RNIVE AA+RD+ +ASVY
Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYE 60
Query: 147 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 34
+ LPKLYAK YCVSCAIHS VVR RS+ +RR+RTPP
Sbjct: 61 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPP 98
>UniRef50_P39938 Cluster: 40S ribosomal protein S26-A; n=68;
Eukaryota|Rep: 40S ribosomal protein S26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 119
Score = 150 bits (364), Expect = 7e-36
Identities = 65/99 (65%), Positives = 82/99 (82%)
Frame = -2
Query: 327 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 148
M +KR + GR K GRGHVK VRC NC++ +PKDKAIK+ IRNIVEAAAVRD+++ASVYP
Sbjct: 1 MPKKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYP 60
Query: 147 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPK 31
+ LPK Y KLHYCVSCAIH+++VR RS++DR+ R PP+
Sbjct: 61 EYALPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPPQ 99
>UniRef50_UPI000049A1F9 Cluster: 40S ribosomal protein S26; n=4;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S26 - Entamoeba histolytica HM-1:IMSS
Length = 147
Score = 146 bits (355), Expect = 9e-35
Identities = 66/99 (66%), Positives = 78/99 (78%)
Frame = -2
Query: 327 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 148
MT KRRN GR+K GRGH + VRC++C RCVPKDKAIK++ I+NIVEAAAVRDI+D S
Sbjct: 1 MTSKRRNNGRSKKGRGHTQNVRCSHCGRCVPKDKAIKRYQIKNIVEAAAVRDISDNSALT 60
Query: 147 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPK 31
++LPK Y KL YCVSC IH +VVR RS+ DRR R PPK
Sbjct: 61 KYKLPKTYMKLEYCVSCGIHGRVVRVRSRTDRRNRLPPK 99
>UniRef50_UPI0000E1F674 Cluster: PREDICTED: similar to 40S ribosomal
protein S26-2, partial; n=4; Pan troglodytes|Rep:
PREDICTED: similar to 40S ribosomal protein S26-2,
partial - Pan troglodytes
Length = 196
Score = 123 bits (296), Expect = 1e-27
Identities = 61/106 (57%), Positives = 75/106 (70%), Gaps = 2/106 (1%)
Frame = -2
Query: 312 RNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLP 133
RN RAK G H++ +RCTN A+ VPKDKAIKKF+IRN+VEAAAVRDI++ASV+ + LP
Sbjct: 1 RNNNRAKKGHSHMQRIRCTNYAQRVPKDKAIKKFIIRNVVEAAAVRDISEASVFNAYVLP 60
Query: 132 K--LYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRP 1
K LY KL+YCV CAIH KVVRN K + +T P P + P
Sbjct: 61 KLYLYVKLNYCVRCAIHGKVVRNPPCKAHKDQTHPPRFRPSRSAAP 106
>UniRef50_Q5MGL0 Cluster: Ribosomal protein S26e; n=1; Lonomia
obliqua|Rep: Ribosomal protein S26e - Lonomia obliqua
(Moth)
Length = 82
Score = 120 bits (289), Expect = 8e-27
Identities = 53/66 (80%), Positives = 60/66 (90%)
Frame = -2
Query: 198 IVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFP 19
+++ +RDIN+ASVY FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPK+ FP
Sbjct: 11 LLKLLPLRDINEASVYTSFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKNTFP 70
Query: 18 RDMSRP 1
RDM+RP
Sbjct: 71 RDMARP 76
>UniRef50_A2DST7 Cluster: 40S ribosomal protein S26, putative; n=1;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein S26,
putative - Trichomonas vaginalis G3
Length = 118
Score = 119 bits (287), Expect = 1e-26
Identities = 52/97 (53%), Positives = 69/97 (71%)
Frame = -2
Query: 327 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 148
M KRRN GR+K RGH + V C NC R VPKDKAI +F I+N+V+A++ +D++DA +Y
Sbjct: 1 MPVKRRNHGRSKMNRGHTRTVNCMNCGRQVPKDKAITRFAIKNMVDASSAKDVSDACIYQ 60
Query: 147 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTP 37
++LPK Y K +YCVSCA+H VVR R+ RR R P
Sbjct: 61 GYELPKTYQKQYYCVSCAVHRHVVRPRNVNVRRNRVP 97
>UniRef50_Q9BHU1 Cluster: 40S ribosomal protein S26; n=1; Sterkiella
nova|Rep: 40S ribosomal protein S26 - Oxytricha nova
Length = 125
Score = 117 bits (281), Expect = 8e-26
Identities = 56/101 (55%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
Frame = -2
Query: 327 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 148
M KRRN GR K +GH VRCTNC R V KDKAIK+F RN+V+A++ RDI + Y
Sbjct: 1 MPSKRRNNGRNKKNKGHADTVRCTNCGRVVSKDKAIKRFQQRNMVDASSKRDIQENYAYA 60
Query: 147 M--FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPK 31
F +PK+Y KL YCVSCAIH+++VR RS +DRR R K
Sbjct: 61 QSDFTMPKIYVKLSYCVSCAIHARIVRVRSVEDRRHRYTTK 101
>UniRef50_Q23PT4 Cluster: Ribosomal protein S26e containing protein;
n=12; Alveolata|Rep: Ribosomal protein S26e containing
protein - Tetrahymena thermophila SB210
Length = 197
Score = 116 bits (278), Expect = 2e-25
Identities = 53/103 (51%), Positives = 71/103 (68%), Gaps = 2/103 (1%)
Frame = -2
Query: 327 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 148
M KRRN GR++ RGH + V CTNC R V KDKA+K++ +R++V+ ++ RDI +
Sbjct: 79 MPVKRRNAGRSQKNRGHTRTVPCTNCGRQVAKDKAVKRYTVRDMVDPSSKRDIQQKLAFE 138
Query: 147 MFQ--LPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSN 25
+ +PKLY KL YC+SCAIHS+VVR R +DRRIR PP N
Sbjct: 139 NEKQGIPKLYVKLQYCISCAIHSRVVRVRCAEDRRIRRPPIRN 181
>UniRef50_UPI00001CB188 Cluster: UPI00001CB188 related cluster; n=2;
Rattus norvegicus|Rep: UPI00001CB188 UniRef100 entry -
Rattus norvegicus
Length = 107
Score = 113 bits (271), Expect = 1e-24
Identities = 55/87 (63%), Positives = 66/87 (75%)
Frame = -2
Query: 297 AKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAK 118
AK G GHV+ V C + A C+PKDKAIK F+I+NI+EAAAVRDI+ A+V+ + LP LY K
Sbjct: 12 AKKGCGHVQPVPCRSSAWCLPKDKAIK-FIIQNILEAAAVRDIDKANVFKAYMLPMLYVK 70
Query: 117 LHYCVSCAIHSKVVRNRSKKDRRIRTP 37
LHYCVSCAIHS+VVRN K RR P
Sbjct: 71 LHYCVSCAIHSEVVRNHLLKLRRTEHP 97
>UniRef50_UPI00005A1FB7 Cluster: PREDICTED: similar to 40S ribosomal
protein S26 isoform 3; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 40S ribosomal protein S26 isoform
3 - Canis familiaris
Length = 118
Score = 111 bits (268), Expect = 3e-24
Identities = 50/59 (84%), Positives = 56/59 (94%)
Frame = -2
Query: 327 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVY 151
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVF 59
>UniRef50_Q4Q6X0 Cluster: Ribosomal protein s26, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein s26, putative -
Leishmania major
Length = 112
Score = 109 bits (263), Expect = 1e-23
Identities = 54/106 (50%), Positives = 72/106 (67%), Gaps = 4/106 (3%)
Frame = -2
Query: 327 MTRKRRNGGRAK--HGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDAS- 157
MT KRRN GR+K H RG VK + C NC R PKDKA+ +FV+R +++AA+ RD+ +AS
Sbjct: 1 MTTKRRNHGRSKPAHSRGRVKPIHCFNCGRLTPKDKAVGRFVVRRMLDAASARDVAEASP 60
Query: 156 VY-PMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNF 22
VY F +PKLY K +C++CAIHS+ VR R +R+IR K F
Sbjct: 61 VYGANFPMPKLYMKQRFCIACAIHSRTVRARPVGNRKIRYTKKVPF 106
>UniRef50_Q9AW37 Cluster: 40S ribosomal protein S26; n=1; Guillardia
theta|Rep: 40S ribosomal protein S26 - Guillardia theta
(Cryptomonas phi)
Length = 98
Score = 104 bits (249), Expect = 6e-22
Identities = 45/95 (47%), Positives = 68/95 (71%)
Frame = -2
Query: 327 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 148
MT+KRRN GR+K RG V+ + C + VPKDKAI ++VI+NIV+ +++RD+ D+ +Y
Sbjct: 1 MTKKRRNNGRSKKNRGLVRRIHCNLTGKLVPKDKAIVRYVIKNIVDLSSLRDLQDSCIYE 60
Query: 147 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIR 43
+ +PKLY K + + AIH+++VR RSK DR+ R
Sbjct: 61 YYTMPKLYYKNTFSIESAIHNRIVRVRSKADRKKR 95
>UniRef50_Q01E61 Cluster: Ribosomal protein S26, cytosolic; n=2;
Ostreococcus|Rep: Ribosomal protein S26, cytosolic -
Ostreococcus tauri
Length = 221
Score = 103 bits (246), Expect = 1e-21
Identities = 45/82 (54%), Positives = 63/82 (76%)
Frame = -2
Query: 276 VKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSC 97
VK V C + VPKDKA+++F++RNIVE+AA+RD+ ++ + + LPKLY K++Y +S
Sbjct: 127 VKRVFCESSGALVPKDKAVRRFMVRNIVESAAIRDLQESCAFESYTLPKLYRKVYYSISA 186
Query: 96 AIHSKVVRNRSKKDRRIRTPPK 31
AIHSKVVR RS++ RRIR PPK
Sbjct: 187 AIHSKVVRVRSREARRIRDPPK 208
>UniRef50_Q8SRN2 Cluster: 40S RIBOSOMAL PROTEIN S26; n=2;
Apansporoblastina|Rep: 40S RIBOSOMAL PROTEIN S26 -
Encephalitozoon cuniculi
Length = 105
Score = 98.7 bits (235), Expect = 3e-20
Identities = 41/91 (45%), Positives = 63/91 (69%)
Frame = -2
Query: 315 RRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQL 136
RRN GR K RG +++C C PKDKAIK+F I++++E A+ D+ A++Y +F++
Sbjct: 2 RRNHGRGKKNRGSAGSIQCDKCGSVTPKDKAIKRFRIQSLIEQASFDDLKQATIYDVFEV 61
Query: 135 PKLYAKLHYCVSCAIHSKVVRNRSKKDRRIR 43
P++ K +CVSCA H+K+VR RS + R+IR
Sbjct: 62 PRMGYKSQFCVSCACHAKIVRVRSSQARKIR 92
>UniRef50_Q3LVZ2 Cluster: Ribosomal protein S26; n=1; Bigelowiella
natans|Rep: Ribosomal protein S26 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 98
Score = 81.0 bits (191), Expect = 6e-15
Identities = 37/94 (39%), Positives = 57/94 (60%)
Frame = -2
Query: 327 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 148
M +KRRN GR+K+ RGHV + C + VP+DKAIKK ++++ ++D + V P
Sbjct: 1 MVKKRRNNGRSKNNRGHVNRIHCMSSNALVPRDKAIKKLNVKSLFFPNILKDTPNVFVLP 60
Query: 147 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRI 46
++ PKLY+ + Y +S A K ++ KK RRI
Sbjct: 61 GYKAPKLYSYVFYSISSAFSQKFIKPGRKKYRRI 94
>UniRef50_UPI0000DA2056 Cluster: PREDICTED: similar to Ankyrin
repeat domain protein 11 (Ankyrin repeat-containing
cofactor 1); n=1; Rattus norvegicus|Rep: PREDICTED:
similar to Ankyrin repeat domain protein 11 (Ankyrin
repeat-containing cofactor 1) - Rattus norvegicus
Length = 682
Score = 66.9 bits (156), Expect = 1e-10
Identities = 33/57 (57%), Positives = 40/57 (70%)
Frame = -2
Query: 285 RGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKL 115
R +V+ + NC + +PKDKA KKFV RNIVEAAAVRDI +A+V LPK Y KL
Sbjct: 34 RSYVRPIGYMNCVQYMPKDKASKKFVTRNIVEAAAVRDIAEANVLDANVLPKFYIKL 90
>UniRef50_A3H8X5 Cluster: Ribosomal protein S26E; n=2;
Thermoprotei|Rep: Ribosomal protein S26E - Caldivirga
maquilingensis IC-167
Length = 152
Score = 59.7 bits (138), Expect = 2e-08
Identities = 27/95 (28%), Positives = 51/95 (53%)
Frame = -2
Query: 321 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMF 142
+KR+N GR K +G V C NC + +P+ KA++ V + + +++
Sbjct: 7 KKRKNRGRHKGDKGKESIVYCDNCGKMIPRSKAVRVTVPYSPIPTDLAKELEKQGAI--- 63
Query: 141 QLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTP 37
+P+ Y YCV+CAI+ +++ RS+ +R+ + P
Sbjct: 64 -VPRYYITKTYCVNCAIYLGIIKVRSEDERKSKKP 97
>UniRef50_UPI0000DC1C52 Cluster: UPI0000DC1C52 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC1C52 UniRef100 entry -
Rattus norvegicus
Length = 70
Score = 56.0 bits (129), Expect = 2e-07
Identities = 40/84 (47%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Frame = -2
Query: 321 RKRRNGGRAKHGR--GHVKAVRCT-NCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVY 151
R RR+ G+ K GR G + V+ N C+ KDKA KFVI+NIVEAAA+R
Sbjct: 3 RMRRDEGKGKKGRSQGLLWPVKAAANFTGCMTKDKA-NKFVIQNIVEAAAIR-------- 53
Query: 150 PMFQLPKLYAKLHYCVSCAIHSKV 79
Y KLH CVSCAIH KV
Sbjct: 54 -------FYVKLHCCVSCAIHIKV 70
>UniRef50_Q05DX2 Cluster: 30S ribosomal protein S26e; n=5;
Crenarchaeota|Rep: 30S ribosomal protein S26e -
Aeropyrum pernix
Length = 95
Score = 54.8 bits (126), Expect = 5e-07
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Frame = -2
Query: 327 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI-NDASVY 151
M +KR + GR K +G V+C NC R VP DKAI + + V+ ++ ++
Sbjct: 1 MPKKRESRGRRKGAKGKAGTVQCDNCGRVVPADKAICVTRMYSPVDPQLAEELEKKGAII 60
Query: 150 PMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRR 49
+ + K YCVSCA+H +V+ R ++ R+
Sbjct: 61 MRYPVTKC-----YCVSCAVHYGIVKIRPEEQRK 89
>UniRef50_Q8ZVQ6 Cluster: Ribosomal protein S26; n=10;
Thermoprotei|Rep: Ribosomal protein S26 - Pyrobaculum
aerophilum
Length = 98
Score = 54.4 bits (125), Expect = 6e-07
Identities = 25/97 (25%), Positives = 50/97 (51%)
Frame = -2
Query: 327 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 148
M +KR+N GR K +G + C NC + +P+ KA++ V + V R++
Sbjct: 1 MPKKRKNRGRKKGDKGREPYLHCDNCGKIMPRSKAVRVTVPYSPVPPDLARELEKQGAI- 59
Query: 147 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTP 37
+ + YC++CA+ +++ RS+++R+ + P
Sbjct: 60 ---ISRYLVTKTYCINCAVFFGIIKVRSREERKKKIP 93
>UniRef50_Q6CS02 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 157
Score = 47.2 bits (107), Expect = 1e-04
Identities = 33/100 (33%), Positives = 48/100 (48%)
Frame = +1
Query: 28 TLGRSTDSSVFLRSVPDNFAVDGA*HAXXXXXXXXXXXXHWVYRGIVNISDRRRFYDVPN 207
+L RS+DSSV S +N +VD A + V RG ISD F DV +
Sbjct: 30 SLWRSSDSSVSSGSDSNNSSVDSARNTVVQLVVGLWKSIFSVDRGFRQISDSSSFNDVSD 89
Query: 208 HELFDSLVLWHAPRAVCASHSFNVTTSMLGASSITALTSH 327
D LVLW+ V S +VT+++L ++ ++L H
Sbjct: 90 SHSLDGLVLWNRSGTVDTSDRLDVTSTLLVSTVGSSLLWH 129
>UniRef50_Q8TZ16 Cluster: Zn-ribbon containing protein; n=1;
Methanopyrus kandleri|Rep: Zn-ribbon containing protein
- Methanopyrus kandleri
Length = 87
Score = 36.3 bits (80), Expect = 0.18
Identities = 24/80 (30%), Positives = 35/80 (43%)
Frame = -2
Query: 333 RNMTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASV 154
RN RK R+G + RG V C C VP+ KAI I + + ++D V
Sbjct: 3 RNPRRKGRDGWKQSKSRGKPSFVTCECCGGKVPRHKAIPWTQGFRITDPVVRQAVDDRYV 62
Query: 153 YPMFQLPKLYAKLHYCVSCA 94
+ + K++YC CA
Sbjct: 63 HTFSR------KVYYCPKCA 76
>UniRef50_Q74N49 Cluster: NEQ043; n=1; Nanoarchaeum equitans|Rep:
NEQ043 - Nanoarchaeum equitans
Length = 84
Score = 33.9 bits (74), Expect = 0.95
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = -2
Query: 273 KAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCA 94
K VRC C R +PK+KA + N+ ++++ V +F + K++ C SCA
Sbjct: 11 KTVRCYYCGRILPKEKAYVIYTKPNV-----AGELSENEVIAVFSQKR---KIYVCPSCA 62
Query: 93 IHSKVVRNRSK 61
H + +R +
Sbjct: 63 RHRGIKDHRKE 73
>UniRef50_A5GMY9 Cluster: Aldo/keto reductase family protein; n=21;
Cyanobacteria|Rep: Aldo/keto reductase family protein -
Synechococcus sp. (strain WH7803)
Length = 385
Score = 33.1 bits (72), Expect = 1.7
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -2
Query: 360 RSLFTGSEVRNMTRKRRNG-GRAKHGRGHVKAVRCTNCARCVPK 232
R+L G ++R +R N GRA H VKA C +C C+P+
Sbjct: 314 RNLTLGHDLREFAEERYNLIGRAGHWWETVKADACAHCGDCLPR 357
>UniRef50_UPI0000499B8D Cluster: hypothetical protein 53.t00011;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 53.t00011 - Entamoeba histolytica HM-1:IMSS
Length = 586
Score = 32.7 bits (71), Expect = 2.2
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = -2
Query: 264 RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAK 118
R N ++C+PKDK++ ++V N ++ +RDI +VY + + KL K
Sbjct: 170 RGINESKCIPKDKSLNEYVENNPIK-FTIRDI--VTVYSISDIKKLMMK 215
>UniRef50_Q4N3J4 Cluster: Putative uncharacterized protein; n=1;
Theileria parva|Rep: Putative uncharacterized protein -
Theileria parva
Length = 3588
Score = 31.9 bits (69), Expect = 3.8
Identities = 22/78 (28%), Positives = 35/78 (44%)
Frame = -2
Query: 291 HGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLH 112
+G + VR TN RC+ K +K NI+ + + S M+ LP+
Sbjct: 2245 NGSEGLSEVRVTN--RCIMCGKLVK-----NIISTENKEEQDGTSEVVMYSLPQTTGVWA 2297
Query: 111 YCVSCAIHSKVVRNRSKK 58
CV+C +SK + N K+
Sbjct: 2298 LCVACEAYSKYLENLCKE 2315
>UniRef50_Q9BHL4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 430
Score = 31.5 bits (68), Expect = 5.1
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = -2
Query: 279 HVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQL-PKLYAKLHYCV 103
H+K ++C NC+ +K+++ +IR+ E A ++ A +L P K H
Sbjct: 198 HLKEIQCDNCSLVFQSEKSLQSHIIRHHQEDADELEVWKAPCSICKELFPSTSVKTHEWY 257
Query: 102 SCAIHSKVV-RNRSKKDRRIRTPPKS 28
C K++ + R K ++++ P S
Sbjct: 258 -CKNREKIIEKQRVSKILKVQSLPSS 282
>UniRef50_Q7RHF5 Cluster: Putative uncharacterized protein PY04032;
n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY04032 - Plasmodium yoelii yoelii
Length = 1508
Score = 31.5 bits (68), Expect = 5.1
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Frame = -2
Query: 240 VPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAI-HSKVVRNRS 64
V K + +K I+ I+ A+ +IND + MF + + CV+ I H+ + RN +
Sbjct: 589 VEKKRCEQKLDIKKIINNDALTNINDLEIRKMFDSSEYNTEKINCVTGDICHTTMFRNNN 648
Query: 63 -----KKDRRIRT 40
KKD++I++
Sbjct: 649 SNHEEKKDKKIKS 661
>UniRef50_UPI0000F2DC53 Cluster: PREDICTED: similar to Zinc finger
protein 646; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to Zinc finger protein 646 - Monodelphis
domestica
Length = 1709
Score = 31.1 bits (67), Expect = 6.7
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 318 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKK 214
+RR GR + G G AVRC C +P+ ++++
Sbjct: 1386 RRRRAGRVRRGGGPRVAVRCALCGHSLPRRGSLER 1420
>UniRef50_UPI0000DA2FA4 Cluster: PREDICTED: similar to Guanine
nucleotide-releasing protein (GNRP) (P140 Ras-GRF); n=1;
Rattus norvegicus|Rep: PREDICTED: similar to Guanine
nucleotide-releasing protein (GNRP) (P140 Ras-GRF) -
Rattus norvegicus
Length = 1245
Score = 30.7 bits (66), Expect = 8.9
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = -2
Query: 231 DKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRN 70
DK +K++ + E R + YPMFQ+P+ LH ++ H V RN
Sbjct: 357 DKLLKQYEAKPDCEE---RTLETFLTYPMFQIPRYILTLHELLAHTPHEHVERN 407
>UniRef50_Q0DMD4 Cluster: Os03g0816200 protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Os03g0816200 protein -
Oryza sativa subsp. japonica (Rice)
Length = 61
Score = 30.7 bits (66), Expect = 8.9
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = -2
Query: 231 DKAIKKFVIRNIVEAAAV 178
DKAI +F++RNIVE AAV
Sbjct: 35 DKAINRFLVRNIVEQAAV 52
>UniRef50_A7P6R9 Cluster: Chromosome chr9 scaffold_7, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr9 scaffold_7, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 858
Score = 30.7 bits (66), Expect = 8.9
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 151 VYRGIVNISDRRRFYDVPNHELFDSLVLWHAPRAVCASHSF 273
VY G +SD +R ++V E F +L+LW++ +H +
Sbjct: 75 VYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGY 115
>UniRef50_Q6C327 Cluster: Yarrowia lipolytica chromosome F of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome F of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 369
Score = 30.7 bits (66), Expect = 8.9
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -2
Query: 315 RRNGGRAKHGRGH--VKAVRCTNCARCVPKDKAIKKFVIRNIVE 190
RRN +H R H V+ CT C+R + A+K+ + N E
Sbjct: 310 RRNHDLRRHKRSHLPVRPFPCTTCSRSFSRKDALKRHLAANACE 353
>UniRef50_Q92570 Cluster: Orphan nuclear receptor NR4A3; n=26;
Euteleostomi|Rep: Orphan nuclear receptor NR4A3 - Homo
sapiens (Human)
Length = 626
Score = 30.7 bits (66), Expect = 8.9
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -2
Query: 126 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 1
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>UniRef50_P28818 Cluster: Guanine nucleotide-releasing protein;
n=24; Euteleostomi|Rep: Guanine nucleotide-releasing
protein - Rattus norvegicus (Rat)
Length = 1244
Score = 30.7 bits (66), Expect = 8.9
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = -2
Query: 231 DKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRN 70
DK +K++ + E R + YPMFQ+P+ LH ++ H V RN
Sbjct: 357 DKLLKQYEAKPDCEE---RTLETFLTYPMFQIPRYILTLHELLAHTPHEHVERN 407
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 343,816,179
Number of Sequences: 1657284
Number of extensions: 5818907
Number of successful extensions: 15415
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 15070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15400
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 13647406432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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