Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14b05
(811 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT009944-1|AAQ22413.1| 1374|Drosophila melanogaster SD04152p pro... 31 2.5
AY069737-1|AAL39882.1| 1015|Drosophila melanogaster LP05501p pro... 31 2.5
AY051905-1|AAK93329.1| 824|Drosophila melanogaster LD39491p pro... 31 2.5
AY036105-1|AAK63171.1| 1321|Drosophila melanogaster zinc finger/... 31 2.5
AY036104-1|AAK63170.1| 975|Drosophila melanogaster zinc finger/... 31 2.5
AF281146-1|AAK06386.1| 825|Drosophila melanogaster AF10 protein. 31 2.5
AF281145-1|AAK06385.1| 1376|Drosophila melanogaster AF10 protein. 31 2.5
AF217960-1|AAF72595.1| 1323|Drosophila melanogaster Alhambra pro... 31 2.5
AE014297-559|AAF54065.2| 824|Drosophila melanogaster CG1070-PB,... 31 2.5
AE014297-558|AAN13343.1| 1323|Drosophila melanogaster CG1070-PD,... 31 2.5
AE014297-557|AAF54062.3| 1376|Drosophila melanogaster CG1070-PA,... 31 2.5
AE014297-556|AAN13342.1| 976|Drosophila melanogaster CG1070-PC,... 31 2.5
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 30 3.3
AE013599-3404|AAF46853.2| 2733|Drosophila melanogaster CG4554-PA... 30 3.3
U42403-1|AAB02355.1| 1180|Drosophila melanogaster stripe a prote... 29 9.9
U42402-1|AAB02354.1| 906|Drosophila melanogaster stripe b prote... 29 9.9
AY094744-1|AAM11097.1| 790|Drosophila melanogaster GM01751p pro... 29 9.9
AE014297-2438|AAN13756.1| 906|Drosophila melanogaster CG7847-PB... 29 9.9
AE014297-2437|AAF55492.1| 1186|Drosophila melanogaster CG7847-PA... 29 9.9
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 29 9.9
>BT009944-1|AAQ22413.1| 1374|Drosophila melanogaster SD04152p protein.
Length = 1374
Score = 30.7 bits (66), Expect = 2.5
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 531 NKMSDRLASAKSALATVNFCVRSSILAITSFVSISTAGAYLPVHST*GMTSSKSHSCNSM 710
+ + D +S+ +T + S+ + + G LP ST T+S+SHS +S
Sbjct: 854 SNIKDISSSSNQQASTASSSSAPSLYVSVPLSTANVPGINLPTSSTSSSTTSESHSASSR 913
Query: 711 A*GKFGLH-YQLNHARFG 761
+ G H QL++A G
Sbjct: 914 SSGAQSQHQQQLSNALVG 931
>AY069737-1|AAL39882.1| 1015|Drosophila melanogaster LP05501p
protein.
Length = 1015
Score = 30.7 bits (66), Expect = 2.5
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 531 NKMSDRLASAKSALATVNFCVRSSILAITSFVSISTAGAYLPVHST*GMTSSKSHSCNSM 710
+ + D +S+ +T + S+ + + G LP ST T+S+SHS +S
Sbjct: 495 SNIKDISSSSNQQASTASSSSAPSLYVSVPLSTANVPGINLPTSSTSSSTTSESHSASSR 554
Query: 711 A*GKFGLH-YQLNHARFG 761
+ G H QL++A G
Sbjct: 555 SSGAQSQHQQQLSNALVG 572
>AY051905-1|AAK93329.1| 824|Drosophila melanogaster LD39491p
protein.
Length = 824
Score = 30.7 bits (66), Expect = 2.5
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 531 NKMSDRLASAKSALATVNFCVRSSILAITSFVSISTAGAYLPVHST*GMTSSKSHSCNSM 710
+ + D +S+ +T + S+ + + G LP ST T+S+SHS +S
Sbjct: 304 SNIKDISSSSNQQASTASSSSAPSLYVSVPLSTANVPGINLPTSSTSSSTTSESHSASSR 363
Query: 711 A*GKFGLH-YQLNHARFG 761
+ G H QL++A G
Sbjct: 364 SSGAQSQHQQQLSNALVG 381
>AY036105-1|AAK63171.1| 1321|Drosophila melanogaster zinc
finger/leucine zipper proteinDALF isoform C3 protein.
Length = 1321
Score = 30.7 bits (66), Expect = 2.5
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 531 NKMSDRLASAKSALATVNFCVRSSILAITSFVSISTAGAYLPVHST*GMTSSKSHSCNSM 710
+ + D +S+ +T + S+ + + G LP ST T+S+SHS +S
Sbjct: 802 SNIKDISSSSNQQASTASSSSAPSLYVSVPLSTANVPGINLPTSSTSSSTTSESHSASSR 861
Query: 711 A*GKFGLH-YQLNHARFG 761
+ G H QL++A G
Sbjct: 862 SSGAQSQHQQQLSNALVG 879
>AY036104-1|AAK63170.1| 975|Drosophila melanogaster zinc
finger/leucine zipper proteinDALF isoform C1 protein.
Length = 975
Score = 30.7 bits (66), Expect = 2.5
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 531 NKMSDRLASAKSALATVNFCVRSSILAITSFVSISTAGAYLPVHST*GMTSSKSHSCNSM 710
+ + D +S+ +T + S+ + + G LP ST T+S+SHS +S
Sbjct: 304 SNIKDISSSSNQQASTASSSSAPSLYVSVPLSTANVPGINLPTSSTSSSTTSESHSASSR 363
Query: 711 A*GKFGLH-YQLNHARFG 761
+ G H QL++A G
Sbjct: 364 SSGAQSQHQQQLSNALVG 381
>AF281146-1|AAK06386.1| 825|Drosophila melanogaster AF10 protein.
Length = 825
Score = 30.7 bits (66), Expect = 2.5
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 531 NKMSDRLASAKSALATVNFCVRSSILAITSFVSISTAGAYLPVHST*GMTSSKSHSCNSM 710
+ + D +S+ +T + S+ + + G LP ST T+S+SHS +S
Sbjct: 305 SNIKDISSSSNQQASTASSSSAPSLYVSVPLSTANVPGINLPTSSTSSSTTSESHSASSR 364
Query: 711 A*GKFGLH-YQLNHARFG 761
+ G H QL++A G
Sbjct: 365 SSGAQSQHQQQLSNALVG 382
>AF281145-1|AAK06385.1| 1376|Drosophila melanogaster AF10 protein.
Length = 1376
Score = 30.7 bits (66), Expect = 2.5
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 531 NKMSDRLASAKSALATVNFCVRSSILAITSFVSISTAGAYLPVHST*GMTSSKSHSCNSM 710
+ + D +S+ +T + S+ + + G LP ST T+S+SHS +S
Sbjct: 856 SNIKDISSSSNQQASTASSSSAPSLYVSVPLSTANVPGINLPTSSTSSSTTSESHSASSR 915
Query: 711 A*GKFGLH-YQLNHARFG 761
+ G H QL++A G
Sbjct: 916 SSGAQSQHQQQLSNALVG 933
>AF217960-1|AAF72595.1| 1323|Drosophila melanogaster Alhambra protein.
Length = 1323
Score = 30.7 bits (66), Expect = 2.5
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 531 NKMSDRLASAKSALATVNFCVRSSILAITSFVSISTAGAYLPVHST*GMTSSKSHSCNSM 710
+ + D +S+ +T + S+ + + G LP ST T+S+SHS +S
Sbjct: 803 SNIKDISSSSNQQASTASSSSAPSLYVSVPLSTANVPGINLPTSSTSSSTTSESHSASSR 862
Query: 711 A*GKFGLH-YQLNHARFG 761
+ G H QL++A G
Sbjct: 863 SSGAQSQHQQQLSNALVG 880
>AE014297-559|AAF54065.2| 824|Drosophila melanogaster CG1070-PB,
isoform B protein.
Length = 824
Score = 30.7 bits (66), Expect = 2.5
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 531 NKMSDRLASAKSALATVNFCVRSSILAITSFVSISTAGAYLPVHST*GMTSSKSHSCNSM 710
+ + D +S+ +T + S+ + + G LP ST T+S+SHS +S
Sbjct: 304 SNIKDISSSSNQQASTASSSSAPSLYVSVPLSTANVPGINLPTSSTSSSTTSESHSASSR 363
Query: 711 A*GKFGLH-YQLNHARFG 761
+ G H QL++A G
Sbjct: 364 SSGAQSQHQQQLSNALVG 381
>AE014297-558|AAN13343.1| 1323|Drosophila melanogaster CG1070-PD,
isoform D protein.
Length = 1323
Score = 30.7 bits (66), Expect = 2.5
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 531 NKMSDRLASAKSALATVNFCVRSSILAITSFVSISTAGAYLPVHST*GMTSSKSHSCNSM 710
+ + D +S+ +T + S+ + + G LP ST T+S+SHS +S
Sbjct: 803 SNIKDISSSSNQQASTASSSSAPSLYVSVPLSTANVPGINLPTSSTSSSTTSESHSASSR 862
Query: 711 A*GKFGLH-YQLNHARFG 761
+ G H QL++A G
Sbjct: 863 SSGAQSQHQQQLSNALVG 880
>AE014297-557|AAF54062.3| 1376|Drosophila melanogaster CG1070-PA,
isoform A protein.
Length = 1376
Score = 30.7 bits (66), Expect = 2.5
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 531 NKMSDRLASAKSALATVNFCVRSSILAITSFVSISTAGAYLPVHST*GMTSSKSHSCNSM 710
+ + D +S+ +T + S+ + + G LP ST T+S+SHS +S
Sbjct: 856 SNIKDISSSSNQQASTASSSSAPSLYVSVPLSTANVPGINLPTSSTSSSTTSESHSASSR 915
Query: 711 A*GKFGLH-YQLNHARFG 761
+ G H QL++A G
Sbjct: 916 SSGAQSQHQQQLSNALVG 933
>AE014297-556|AAN13342.1| 976|Drosophila melanogaster CG1070-PC,
isoform C protein.
Length = 976
Score = 30.7 bits (66), Expect = 2.5
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 531 NKMSDRLASAKSALATVNFCVRSSILAITSFVSISTAGAYLPVHST*GMTSSKSHSCNSM 710
+ + D +S+ +T + S+ + + G LP ST T+S+SHS +S
Sbjct: 304 SNIKDISSSSNQQASTASSSSAPSLYVSVPLSTANVPGINLPTSSTSSSTTSESHSASSR 363
Query: 711 A*GKFGLH-YQLNHARFG 761
+ G H QL++A G
Sbjct: 364 SSGAQSQHQQQLSNALVG 381
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 30.3 bits (65), Expect = 3.3
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +3
Query: 447 SCAVSRRAFSQSCRAVSASRRATIISLANKMSDRLASAKSALATVNFCVRSSILAITSFV 626
SC +++ + S RAVS + +I +SD A A S + ++ ++ LA +
Sbjct: 782 SCVSTKKTYLDSARAVSRTMALRLIRGFRTISDDAAHALSGITPIDLDIKGKYLASEGYT 841
Query: 627 SI 632
+
Sbjct: 842 QL 843
>AE013599-3404|AAF46853.2| 2733|Drosophila melanogaster CG4554-PA
protein.
Length = 2733
Score = 30.3 bits (65), Expect = 3.3
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 1/121 (0%)
Frame = -1
Query: 616 VIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAETARQDCENARRETAQLANR 437
V+A++ + + + A E N L+ + + +VA + CE+ + Q+
Sbjct: 2078 VVARMFQILKNFSTFGATRQEENAQLVRASFKAVVA------LLRKCEDYQLSNEQIEQL 2131
Query: 436 MADIAQDVI-AKPSNPQLCHSLAVCDVGNNEFAFLRPQKRSLGRSLKRLGSNDVIFSSDY 260
+ I Q++ + S+ + +L VG + RSL +KRLG +I SSDY
Sbjct: 2132 LLHIEQELQEGECSSQTMVFTLLKALVGR------KVDSRSLHDLMKRLGDLSIISSSDY 2185
Query: 259 V 257
V
Sbjct: 2186 V 2186
>U42403-1|AAB02355.1| 1180|Drosophila melanogaster stripe a protein
protein.
Length = 1180
Score = 28.7 bits (61), Expect = 9.9
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -3
Query: 233 QSKGSHTAQQVQSQAQPHHVAGRLHARGANERDRLHYDRPTNCAHEQFAQRAIKI 69
Q + QQ Q Q QP H +L + + + HY + H+Q Q+A KI
Sbjct: 657 QQQQQQQQQQQQHQQQPLHQQQQLQHQQQQQHHQQHYQQHA-IQHQQSQQQASKI 710
>U42402-1|AAB02354.1| 906|Drosophila melanogaster stripe b protein
protein.
Length = 906
Score = 28.7 bits (61), Expect = 9.9
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -3
Query: 233 QSKGSHTAQQVQSQAQPHHVAGRLHARGANERDRLHYDRPTNCAHEQFAQRAIKI 69
Q + QQ Q Q QP H +L + + + HY + H+Q Q+A KI
Sbjct: 383 QQQQQQQQQQQQHQQQPLHQQQQLQHQQQQQHHQQHYQQHA-IQHQQSQQQASKI 436
>AY094744-1|AAM11097.1| 790|Drosophila melanogaster GM01751p
protein.
Length = 790
Score = 28.7 bits (61), Expect = 9.9
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Frame = -1
Query: 616 VIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAETARQDCENARRETAQLANR 437
V+ ++ + + + A E N L+ + + +VA + CE+ + Q+
Sbjct: 135 VVTRMFQILKNFSTFGATRQEENAQLVRASFKAVVA------LLRKCEDYQLSNEQIEQL 188
Query: 436 MADIAQDVI-AKPSNPQLCHSLAVCDVGNNEFAFLRPQKRSLGRSLKRLGSNDVIFSSDY 260
+ I Q++ + S+ + +L VG + RSL +KRLG +I SSDY
Sbjct: 189 LLHIEQELQEGECSSQTMVFTLLKALVGR------KVDSRSLHDLMKRLGDLSIISSSDY 242
Query: 259 V 257
V
Sbjct: 243 V 243
>AE014297-2438|AAN13756.1| 906|Drosophila melanogaster CG7847-PB,
isoform B protein.
Length = 906
Score = 28.7 bits (61), Expect = 9.9
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -3
Query: 233 QSKGSHTAQQVQSQAQPHHVAGRLHARGANERDRLHYDRPTNCAHEQFAQRAIKI 69
Q + QQ Q Q QP H +L + + + HY + H+Q Q+A KI
Sbjct: 383 QQQQQQQQQQQQHQQQPLHQQQQLQHQQQQQHHQQHYQQHA-IQHQQSQQQASKI 436
>AE014297-2437|AAF55492.1| 1186|Drosophila melanogaster CG7847-PA,
isoform A protein.
Length = 1186
Score = 28.7 bits (61), Expect = 9.9
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -3
Query: 233 QSKGSHTAQQVQSQAQPHHVAGRLHARGANERDRLHYDRPTNCAHEQFAQRAIKI 69
Q + QQ Q Q QP H +L + + + HY + H+Q Q+A KI
Sbjct: 663 QQQQQQQQQQQQHQQQPLHQQQQLQHQQQQQHHQQHYQQHA-IQHQQSQQQASKI 716
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 28.7 bits (61), Expect = 9.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 420 CAMSAMRLASCAVSRRAFSQSCRAV 494
C + + ASCAV R + Q CR V
Sbjct: 2148 CNLPCTKTASCAVGERCYQQVCRKV 2172
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,335,781
Number of Sequences: 53049
Number of extensions: 806223
Number of successful extensions: 2977
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2970
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3798466620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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