Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14b04
(353 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P48588 Cluster: 40S ribosomal protein S25; n=86; Eukary... 124 6e-28
UniRef50_P62851 Cluster: 40S ribosomal protein S25; n=42; Eutele... 90 1e-17
UniRef50_A3BVR1 Cluster: Putative uncharacterized protein; n=3; ... 77 1e-13
UniRef50_Q5KGY5 Cluster: Ribosomal protein, putative; n=7; Dikar... 66 2e-10
UniRef50_Q9N9V4 Cluster: 40S ribosomal protein S25; n=8; Trypano... 64 9e-10
UniRef50_A7AS55 Cluster: Ribosomal protein S25 , putative; n=1; ... 58 3e-08
UniRef50_Q00XY1 Cluster: Ribosomal protein S25, cytosolic-tomato... 54 5e-07
UniRef50_O15597 Cluster: Ribosomal protein S25; n=3; Entamoeba h... 54 5e-07
UniRef50_Q3E792 Cluster: 40S ribosomal protein S25-A precursor; ... 53 1e-06
UniRef50_Q5CTY4 Cluster: 40S ribosomal protein S25; n=4; Apicomp... 52 2e-06
UniRef50_A0C3V6 Cluster: Chromosome undetermined scaffold_148, w... 46 2e-04
UniRef50_A2BLT6 Cluster: 30S ribosomal protein S25e; n=1; Hypert... 37 0.11
UniRef50_Q0INA0 Cluster: Os12g0489400 protein; n=1; Oryza sativa... 35 0.35
UniRef50_UPI00001613CE Cluster: PREDICTED: similar to 40S riboso... 34 0.80
UniRef50_UPI0000E4A210 Cluster: PREDICTED: similar to Spt6, part... 33 1.1
UniRef50_Q8ZVP1 Cluster: 30S ribosomal protein S25e; n=4; Pyroba... 33 1.4
UniRef50_Q9Y914 Cluster: 30S ribosomal protein S25e; n=1; Aeropy... 33 1.4
UniRef50_Q96387 Cluster: Receptor-like protein kinase precursor;... 32 2.4
UniRef50_A3LS16 Cluster: Predicted protein; n=2; Saccharomycetac... 32 2.4
UniRef50_A0QUC9 Cluster: Aldehyde dehydrogenase; n=1; Mycobacter... 32 3.2
UniRef50_Q01GH7 Cluster: MGC79802 protein; n=1; Ostreococcus tau... 32 3.2
UniRef50_Q7MWD0 Cluster: Lipoprotein, putative; n=1; Porphyromon... 31 4.3
UniRef50_A1SJR8 Cluster: Regulatory protein, ArsR; n=5; Actinomy... 31 4.3
UniRef50_A0Q473 Cluster: Succinate semialdehyde dehydrogenase (N... 31 4.3
UniRef50_Q8NIW5 Cluster: Putative uncharacterized protein 94C8.0... 31 4.3
UniRef50_A1RYY6 Cluster: Small subunit ribosomal protein S25e; n... 31 4.3
UniRef50_Q1YII8 Cluster: Possible regulatory protein; n=1; Auran... 31 5.7
UniRef50_Q1D826 Cluster: Patatin-like phospholipase family prote... 31 5.7
UniRef50_A4X4L4 Cluster: Helix-turn-helix, type 11 domain protei... 31 5.7
UniRef50_UPI0000EBCE1B Cluster: PREDICTED: hypothetical protein;... 31 7.5
UniRef50_A0KN09 Cluster: CAMP-binding protein; n=4; Gammaproteob... 31 7.5
UniRef50_Q98RQ8 Cluster: 40S ribosomal protein S25; n=1; Guillar... 31 7.5
UniRef50_Q5ZQV9 Cluster: Putative uncharacterized protein; n=3; ... 31 7.5
UniRef50_Q54UG9 Cluster: C2H2 type Zn finger-containing protein;... 31 7.5
UniRef50_A6QXR6 Cluster: Predicted protein; n=1; Ajellomyces cap... 31 7.5
UniRef50_UPI0000EBC2A0 Cluster: PREDICTED: similar to CARD8 prot... 30 9.9
UniRef50_UPI000049A05D Cluster: protein kinase; n=4; Entamoeba h... 30 9.9
UniRef50_Q3UHB9 Cluster: Adult male brain UNDEFINED_CELL_LINE cD... 30 9.9
UniRef50_Q6KII0 Cluster: Expressed protein; n=1; Mycoplasma mobi... 30 9.9
UniRef50_Q11XP8 Cluster: CHU large protein; uncharacterized; n=1... 30 9.9
UniRef50_A6Q3M4 Cluster: Putative uncharacterized protein; n=2; ... 30 9.9
UniRef50_A7SW98 Cluster: Predicted protein; n=1; Nematostella ve... 30 9.9
UniRef50_A5KCN0 Cluster: Putative uncharacterized protein; n=1; ... 30 9.9
UniRef50_A5K7J0 Cluster: Putative uncharacterized protein; n=1; ... 30 9.9
UniRef50_A2E073 Cluster: Putative uncharacterized protein; n=2; ... 30 9.9
UniRef50_Q8PXK8 Cluster: Conserved protein; n=3; Methanosarcina|... 30 9.9
UniRef50_Q9R1M3 Cluster: Testis-specific Y-encoded protein 1; n=... 30 9.9
>UniRef50_P48588 Cluster: 40S ribosomal protein S25; n=86;
Eukaryota|Rep: 40S ribosomal protein S25 - Drosophila
melanogaster (Fruit fly)
Length = 117
Score = 124 bits (298), Expect = 6e-28
Identities = 65/97 (67%), Positives = 69/97 (71%)
Frame = -2
Query: 337 MPPKKDAKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXKLNNQVLFDKPTYEKLYKE 158
MPPKKDAK+SAKQPQ KLNNQVLFDK TYEKLYKE
Sbjct: 1 MPPKKDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKE 60
Query: 157 VPQYKLITPAVVSERLKVRGSLARRALIELREKGLIK 47
VP YKLITP+VVSERLK+RGSLA+RALIELREKGLIK
Sbjct: 61 VPAYKLITPSVVSERLKIRGSLAKRALIELREKGLIK 97
>UniRef50_P62851 Cluster: 40S ribosomal protein S25; n=42;
Euteleostomi|Rep: 40S ribosomal protein S25 - Homo
sapiens (Human)
Length = 125
Score = 89.8 bits (213), Expect = 1e-17
Identities = 45/55 (81%), Positives = 47/55 (85%)
Frame = -2
Query: 211 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIK 47
LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL KGLIK
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIK 98
>UniRef50_A3BVR1 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 234
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/55 (61%), Positives = 46/55 (83%)
Frame = -2
Query: 211 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIK 47
+NN VLFD+ TY+KL EVP+YK ITP+V+SERL++ GSLARRA+ +L +GLI+
Sbjct: 163 VNNSVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAINDLMTRGLIR 217
>UniRef50_Q5KGY5 Cluster: Ribosomal protein, putative; n=7;
Dikarya|Rep: Ribosomal protein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 107
Score = 66.1 bits (154), Expect = 2e-10
Identities = 29/54 (53%), Positives = 42/54 (77%)
Frame = -2
Query: 208 NNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIK 47
NN V+ DK Y+++ KEVP YKLI+ +V+ +R+K+ GSLARRA+ L ++GLIK
Sbjct: 37 NNAVIVDKAVYDRIIKEVPTYKLISQSVLIDRMKINGSLARRAIAFLEKEGLIK 90
>UniRef50_Q9N9V4 Cluster: 40S ribosomal protein S25; n=8;
Trypanosomatidae|Rep: 40S ribosomal protein S25 -
Leishmania infantum
Length = 120
Score = 63.7 bits (148), Expect = 9e-10
Identities = 29/55 (52%), Positives = 41/55 (74%)
Frame = -2
Query: 211 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIK 47
L N V+FDK TY+KL EVP+YKLITP+++S+RLK+ S+A L +L + LI+
Sbjct: 36 LQNAVMFDKETYDKLRSEVPKYKLITPSIISDRLKIAVSIAAAGLKQLCREKLIR 90
>UniRef50_A7AS55 Cluster: Ribosomal protein S25 , putative; n=1;
Babesia bovis|Rep: Ribosomal protein S25 , putative -
Babesia bovis
Length = 104
Score = 58.4 bits (135), Expect = 3e-08
Identities = 26/54 (48%), Positives = 39/54 (72%)
Frame = -2
Query: 208 NNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIK 47
N+ V FDK TY+KL ++P+ +LIT + + ++LKV S+AR+AL L E+ LIK
Sbjct: 36 NHAVFFDKATYDKLMSDIPKARLITISTIVDKLKVNASMARKALAHLEEQKLIK 89
>UniRef50_Q00XY1 Cluster: Ribosomal protein S25, cytosolic-tomato
sp|P46301|RS25_LYCES 40S ribosomal protein S25 p; n=1;
Ostreococcus tauri|Rep: Ribosomal protein S25,
cytosolic-tomato sp|P46301|RS25_LYCES 40S ribosomal
protein S25 p - Ostreococcus tauri
Length = 82
Score = 54.4 bits (125), Expect = 5e-07
Identities = 25/45 (55%), Positives = 35/45 (77%)
Frame = -2
Query: 181 TYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIK 47
TY+KL EVP+YK+IT AV+ +RL++ SLAR+ + L+ KGLIK
Sbjct: 20 TYDKLLAEVPKYKMITTAVLCDRLRITCSLARKGIAILQAKGLIK 64
>UniRef50_O15597 Cluster: Ribosomal protein S25; n=3; Entamoeba
histolytica|Rep: Ribosomal protein S25 - Entamoeba
histolytica
Length = 129
Score = 54.4 bits (125), Expect = 5e-07
Identities = 26/54 (48%), Positives = 37/54 (68%)
Frame = -2
Query: 211 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLI 50
LNN V+FDK T +K K+VP K+ITP VV++R+ + G+L + L L +K LI
Sbjct: 39 LNNTVIFDKATLDKCAKDVPSMKVITPPVVADRITITGALGKILLKALDKKELI 92
>UniRef50_Q3E792 Cluster: 40S ribosomal protein S25-A precursor;
n=24; Eukaryota|Rep: 40S ribosomal protein S25-A
precursor - Saccharomyces cerevisiae (Baker's yeast)
Length = 108
Score = 53.2 bits (122), Expect = 1e-06
Identities = 23/51 (45%), Positives = 38/51 (74%)
Frame = -2
Query: 199 VLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIK 47
V+ D+ Y+++ KEVP Y+ ++ +V+ +RLK+ GSLAR AL L ++G+IK
Sbjct: 40 VILDQEKYDRILKEVPTYRYVSVSVLVDRLKIGGSLARIALRHLEKEGIIK 90
>UniRef50_Q5CTY4 Cluster: 40S ribosomal protein S25; n=4;
Apicomplexa|Rep: 40S ribosomal protein S25 -
Cryptosporidium parvum Iowa II
Length = 106
Score = 52.4 bits (120), Expect = 2e-06
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = -2
Query: 208 NNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIK 47
N+ VLFDK T ++ + +V + +L+TPAVV +LKV S AR L + KG+IK
Sbjct: 38 NHSVLFDKKTADRFHSDVLKSRLLTPAVVVNQLKVNASAARAMLRDCESKGIIK 91
>UniRef50_A0C3V6 Cluster: Chromosome undetermined scaffold_148,
whole genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_148,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 204
Score = 45.6 bits (103), Expect = 2e-04
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = -2
Query: 211 LNNQVLFDKPTYEKLYKEVPQY-KLITPAVVSERLKVRGSLARRALIELREKGLI 50
LNN V D +Y+++ ++P+ LIT + VS++ KV GSLARR + + GL+
Sbjct: 103 LNNAVFLDNTSYKQIETQLPKMGALITVSTVSDKFKVNGSLARRCIRHFAKSGLL 157
>UniRef50_A2BLT6 Cluster: 30S ribosomal protein S25e; n=1;
Hyperthermus butylicus DSM 5456|Rep: 30S ribosomal
protein S25e - Hyperthermus butylicus (strain DSM 5456 /
JCM 9403)
Length = 76
Score = 36.7 bits (81), Expect = 0.11
Identities = 15/49 (30%), Positives = 33/49 (67%)
Frame = -2
Query: 178 YEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKXGSPT 32
Y+++ +EV + +TP +++E+ + SLAR+ L L ++G+++ SP+
Sbjct: 18 YKRIAREVKRESFVTPYMLAEKYNMTISLARQVLKRLAKEGIVELYSPS 66
>UniRef50_Q0INA0 Cluster: Os12g0489400 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os12g0489400 protein -
Oryza sativa subsp. japonica (Rice)
Length = 95
Score = 35.1 bits (77), Expect = 0.35
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +1
Query: 217 HELFLWTTSSSWLCRHRILPSSSVFFEAVWPKPSRPSWAASLN 345
H LF W++S S+ RHR LP +AVW RPS +++L+
Sbjct: 47 HPLFRWSSSLSFARRHRFLPLVHSLRQAVW-SLLRPSLSSTLS 88
>UniRef50_UPI00001613CE Cluster: PREDICTED: similar to 40S ribosomal
protein S25; n=4; Euarchontoglires|Rep: PREDICTED:
similar to 40S ribosomal protein S25 - Homo sapiens
Length = 102
Score = 33.9 bits (74), Expect = 0.80
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -2
Query: 115 RLKVRGSLARRALIELREKGLIK 47
RL++RGSLAR AL EL KGLIK
Sbjct: 53 RLEIRGSLARAALQELLGKGLIK 75
>UniRef50_UPI0000E4A210 Cluster: PREDICTED: similar to Spt6,
partial; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to Spt6, partial - Strongylocentrotus
purpuratus
Length = 913
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -1
Query: 341 KDAAQEGREGFGQTASKNTEEEGRIRWRQSQEE 243
KD +E EG G+T K+TEE+G + + EE
Sbjct: 149 KDGEEEDGEGEGETKKKDTEEDGEVADEEEMEE 181
>UniRef50_Q8ZVP1 Cluster: 30S ribosomal protein S25e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S25e -
Pyrobaculum aerophilum
Length = 110
Score = 33.1 bits (72), Expect = 1.4
Identities = 16/49 (32%), Positives = 31/49 (63%)
Frame = -2
Query: 202 QVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKG 56
QVL D+ ++ + KEV ++ITP ++ + ++ S+A + L L+E+G
Sbjct: 43 QVL-DEKVFQAIAKEVQNMRVITPYEIASKYGIKMSVAFKVLRNLKERG 90
>UniRef50_Q9Y914 Cluster: 30S ribosomal protein S25e; n=1; Aeropyrum
pernix|Rep: 30S ribosomal protein S25e - Aeropyrum
pernix
Length = 103
Score = 33.1 bits (72), Expect = 1.4
Identities = 15/42 (35%), Positives = 29/42 (69%)
Frame = -2
Query: 175 EKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLI 50
E+ KEV + + +TP +++++ V+ S+ARR L L E+G++
Sbjct: 36 EQARKEVARERWVTPHKLAQKMGVKVSIARRVLRILEEEGVL 77
>UniRef50_Q96387 Cluster: Receptor-like protein kinase precursor;
n=1; Catharanthus roseus|Rep: Receptor-like protein
kinase precursor - Catharanthus roseus (Rosy periwinkle)
(Madagascar periwinkle)
Length = 803
Score = 32.3 bits (70), Expect = 2.4
Identities = 25/59 (42%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Frame = +3
Query: 132 GVISLY-CGTSLYS-FSYVGLSNNTWLFNLSRTFPLD---HFFFLALPPPDPSFFFCVF 293
G S+Y GT L+S F N TWLFN+ F HF L P P+ +FFF VF
Sbjct: 258 GPSSVYGTGTKLHSVFDPNTQINATWLFNVDSGFGYFIRFHFCNLLNPIPNNNFFFNVF 316
>UniRef50_A3LS16 Cluster: Predicted protein; n=2;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 540
Score = 32.3 bits (70), Expect = 2.4
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +3
Query: 72 SMSALLAREPRTFNLSDTTAGVISLYCGTSLYSFSYVGLSNNTWLFNLSRTFPLDHFFFL 251
S+S+ + FNL+ G+ ++ G+S +F+ +G+ + W F + P+D FL
Sbjct: 133 SLSSDIIGRRWAFNLTFLITGIFAVVAGSSP-TFAAIGVFDAFWSFGVGGNLPVDSAIFL 191
Query: 252 -ALP 260
ALP
Sbjct: 192 EALP 195
>UniRef50_A0QUC9 Cluster: Aldehyde dehydrogenase; n=1; Mycobacterium
smegmatis str. MC2 155|Rep: Aldehyde dehydrogenase -
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Length = 480
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +3
Query: 18 SPAHGVGLPXLMRPFSLSSMSALLAREPRTFNLSDTTAGVISLYCGT 158
+PA VG P +++P + + +SALL E F+ + AG +++ CG+
Sbjct: 171 APALAVGCPVVLKPATQTPLSALLLAE--VFHEAGLPAGWLNVVCGS 215
>UniRef50_Q01GH7 Cluster: MGC79802 protein; n=1; Ostreococcus
tauri|Rep: MGC79802 protein - Ostreococcus tauri
Length = 624
Score = 31.9 bits (69), Expect = 3.2
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 118 ERLKVRGSLARRALIELREKGLIKXGSPTPWAGDLPRV 5
E + V+G++A+RAL E R + PW G+ RV
Sbjct: 111 EHIDVKGTIAQRALFERRVLYCVPVPGEQPWVGEAERV 148
>UniRef50_Q7MWD0 Cluster: Lipoprotein, putative; n=1; Porphyromonas
gingivalis|Rep: Lipoprotein, putative - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 327
Score = 31.5 bits (68), Expect = 4.3
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +1
Query: 199 PGCSTCHELFLWTTSSSWLCRHRILPSSSVFFEAVWPKPSRPSWAASLN 345
PGC TC EL WL ++ S + ++P + +W A L+
Sbjct: 223 PGCHTCSELIRQLHQDDWL--RNLVESKQLSILFIYPDNDKNAWVAGLS 269
>UniRef50_A1SJR8 Cluster: Regulatory protein, ArsR; n=5;
Actinomycetales|Rep: Regulatory protein, ArsR -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 240
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = -2
Query: 190 DKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKXGSPTPWAG 20
D+PT +++ + + T A ++ERL + + RR L +L E+G ++ P G
Sbjct: 16 DQPTRQRVARSILDNGPSTAAALAERLDLTPAAVRRHLDQLLEEGAVEAREPRSLTG 72
>UniRef50_A0Q473 Cluster: Succinate semialdehyde dehydrogenase
(NAD(P)+ dependent); n=6; Francisella tularensis|Rep:
Succinate semialdehyde dehydrogenase (NAD(P)+ dependent)
- Francisella tularensis subsp. novicida (strain U112)
Length = 477
Score = 31.5 bits (68), Expect = 4.3
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +3
Query: 6 TRGRSPAHGVGLPXLMRPFSLSSMSALLAREPRTFNLSDTTAGVISLYCGTS 161
TR +PA G +++P L+ ++AL ARE F S ++ + CG S
Sbjct: 157 TRKAAPALAAGCSVILKPSELTPLTALAARE--LFIASGADENLLQVVCGDS 206
>UniRef50_Q8NIW5 Cluster: Putative uncharacterized protein 94C8.080;
n=1; Neurospora crassa|Rep: Putative uncharacterized
protein 94C8.080 - Neurospora crassa
Length = 1565
Score = 31.5 bits (68), Expect = 4.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 183 GLSNNTWLFNLSRTFPLDHFFFLALPPPDPS 275
GL N+ W F + T+P FF L+ PP P+
Sbjct: 1290 GLGNDDWSFYAAETYPAATFFNLSPRPPRPA 1320
>UniRef50_A1RYY6 Cluster: Small subunit ribosomal protein S25e; n=1;
Thermofilum pendens Hrk 5|Rep: Small subunit ribosomal
protein S25e - Thermofilum pendens (strain Hrk 5)
Length = 112
Score = 31.5 bits (68), Expect = 4.3
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = -2
Query: 175 EKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLI 50
E + KE+ K +TP V++ + ++ S A++ L EL +G++
Sbjct: 48 EHVIKEIRGLKYVTPYVLASKFSLKLSRAKKVLRELESRGVV 89
>UniRef50_Q1YII8 Cluster: Possible regulatory protein; n=1;
Aurantimonas sp. SI85-9A1|Rep: Possible regulatory
protein - Aurantimonas sp. SI85-9A1
Length = 344
Score = 31.1 bits (67), Expect = 5.7
Identities = 14/37 (37%), Positives = 25/37 (67%)
Frame = -2
Query: 157 VPQYKLITPAVVSERLKVRGSLARRALIELREKGLIK 47
+P +T ++++ERL + + RRAL EL ++GL+K
Sbjct: 41 LPALGHLTESLLAERLGISRAPVRRALSELEQQGLVK 77
>UniRef50_Q1D826 Cluster: Patatin-like phospholipase family protein;
n=1; Myxococcus xanthus DK 1622|Rep: Patatin-like
phospholipase family protein - Myxococcus xanthus
(strain DK 1622)
Length = 481
Score = 31.1 bits (67), Expect = 5.7
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = -2
Query: 190 DKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIK 47
D P+ L KE ++++ P E VR SLA AL++LRE+ +++
Sbjct: 5 DGPSKHVLLKE--RFQITRPLEEMELRLVRASLANAALVDLREEAILR 50
>UniRef50_A4X4L4 Cluster: Helix-turn-helix, type 11 domain protein;
n=2; Actinomycetales|Rep: Helix-turn-helix, type 11
domain protein - Salinispora tropica CNB-440
Length = 339
Score = 31.1 bits (67), Expect = 5.7
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -2
Query: 136 TPAVVSERLKVRGSLARRALIELREKGLIKXGSPTPWAG 20
T A ++ER++V RR + LRE G P PW G
Sbjct: 39 TCAELAERMEVTDRTVRRDIARLRELGYGVESDPGPWGG 77
>UniRef50_UPI0000EBCE1B Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 765
Score = 30.7 bits (66), Expect = 7.5
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 232 WTTSSSWLCRHRILPSSSVFFEAVWPKPSRPSWA 333
W TSS + + + P + A WP P+ P WA
Sbjct: 482 WXTSSQAMAQQQEQPLPITWILAKWPSPAPPRWA 515
>UniRef50_A0KN09 Cluster: CAMP-binding protein; n=4;
Gammaproteobacteria|Rep: CAMP-binding protein -
Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966
/ NCIB 9240)
Length = 236
Score = 30.7 bits (66), Expect = 7.5
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -2
Query: 88 RRALIELREKGLIKXGSPTPWAGDLPRVR 2
RRAL EL E+G++ GS P DL R+R
Sbjct: 203 RRALKELIEQGIVADGSDGPVIADLARLR 231
>UniRef50_Q98RQ8 Cluster: 40S ribosomal protein S25; n=1; Guillardia
theta|Rep: 40S ribosomal protein S25 - Guillardia theta
(Cryptomonas phi)
Length = 87
Score = 30.7 bits (66), Expect = 7.5
Identities = 12/47 (25%), Positives = 28/47 (59%)
Frame = -2
Query: 208 NNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIEL 68
NNQ+ +K Y+K+ E+ + K ++ +S + +++ SL ++ + L
Sbjct: 19 NNQIYIEKSLYQKIIDELNKEKFVSFTSLSSKYRIKISLIKKIINHL 65
>UniRef50_Q5ZQV9 Cluster: Putative uncharacterized protein; n=3;
Siphoviridae|Rep: Putative uncharacterized protein -
Pseudomonas phage B3
Length = 736
Score = 30.7 bits (66), Expect = 7.5
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 105 TFNLSDTTAGVISLYCGTSLYSFSYVGLSNNTWLFNL 215
+ +L T +S+Y GTSL SY GL+ TW + L
Sbjct: 650 SISLEAGTTYTLSIYSGTSLKK-SYTGLTGTTWTYPL 685
>UniRef50_Q54UG9 Cluster: C2H2 type Zn finger-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: C2H2 type Zn
finger-containing protein - Dictyostelium discoideum AX4
Length = 576
Score = 30.7 bits (66), Expect = 7.5
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = -3
Query: 306 PNSLKKHRRRRKDPVAAKPRRRSGPKEKFVT 214
P+ LKKH R+ D VA G KEKFVT
Sbjct: 256 PSYLKKHAARKHDGVATNICMFPGCKEKFVT 286
>UniRef50_A6QXR6 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 433
Score = 30.7 bits (66), Expect = 7.5
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +3
Query: 21 PAHGVGLPXLM-RPFSLSSMSAL--LAREPRTFNLSDTTAGVISLYCGTSLYSFSYVGLS 191
P H LP L +P + + AL LA +PR+FN +D A + L G S Y S + S
Sbjct: 2 PLHVFDLPQLYTKPTATDILRALERLAVKPRSFNYNDGNAQLSILQTGISQYLTSIIA-S 60
Query: 192 NNTWL 206
+W+
Sbjct: 61 ALSWI 65
>UniRef50_UPI0000EBC2A0 Cluster: PREDICTED: similar to CARD8
protein; n=3; Amniota|Rep: PREDICTED: similar to CARD8
protein - Bos taurus
Length = 619
Score = 30.3 bits (65), Expect = 9.9
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -3
Query: 105 SEVPWREEHSSSLGKKVSSXQVVQHHGQVI-YXACD 1
+ V WR S +G V S + V HHG VI Y A D
Sbjct: 332 THVKWRVSSLSPVGPVVQSEETVFHHGAVILYKAID 367
>UniRef50_UPI000049A05D Cluster: protein kinase; n=4; Entamoeba
histolytica HM-1:IMSS|Rep: protein kinase - Entamoeba
histolytica HM-1:IMSS
Length = 1011
Score = 30.3 bits (65), Expect = 9.9
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +1
Query: 184 VYQTTPGCSTCHELFLWTTSSSWLCRHRILPSSSVFFEAVWPKP 315
+Y TT GC+ HE F + +S C + SS F + W P
Sbjct: 259 LYPTTIGCNIPHETFTYNLTSR--CPGCFITFSSYFIDPFWETP 300
>UniRef50_Q3UHB9 Cluster: Adult male brain UNDEFINED_CELL_LINE cDNA,
RIKEN full-length enriched library, clone:M5C1049D24
product:hypothetical Proline-rich region
profile/Alanine-rich region profile/Arginine-rich region
profile containing protein, full insert sequence; n=2;
Mus musculus|Rep: Adult male brain UNDEFINED_CELL_LINE
cDNA, RIKEN full-length enriched library,
clone:M5C1049D24 product:hypothetical Proline-rich
region profile/Alanine-rich region profile/Arginine-rich
region profile containing protein, full insert sequence
- Mus musculus (Mouse)
Length = 345
Score = 30.3 bits (65), Expect = 9.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 294 KKHRRRRKDPVAAKPRRRSGPKEK 223
++ RRRRK P A P RR GP+ +
Sbjct: 48 RRRRRRRKPPPAPPPPRRHGPESR 71
>UniRef50_Q6KII0 Cluster: Expressed protein; n=1; Mycoplasma
mobile|Rep: Expressed protein - Mycoplasma mobile
Length = 395
Score = 30.3 bits (65), Expect = 9.9
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 132 GVISLYCGTSLYSFSYVGLSN-NTWLFNLSRTFP 230
G+IS + GT LY F + N +LFN++R FP
Sbjct: 23 GLISTFVGTILYWFYLFPTTGLNVFLFNITRPFP 56
>UniRef50_Q11XP8 Cluster: CHU large protein; uncharacterized; n=1;
Cytophaga hutchinsonii ATCC 33406|Rep: CHU large
protein; uncharacterized - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 1032
Score = 30.3 bits (65), Expect = 9.9
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = -2
Query: 205 NQVLFDKPTYEKLYKEVPQYKLITPA--VVSERLKVRGSLARRALIELREKGLIKXG 41
NQ +F P Y +L + K +TP+ + S KV +L+ L++L + LI G
Sbjct: 186 NQTVFPSPNYSELVIDGTGIKSLTPSPFMASMETKVSKALSLNHLLQLNNQDLIYNG 242
>UniRef50_A6Q3M4 Cluster: Putative uncharacterized protein; n=2;
unclassified Epsilonproteobacteria|Rep: Putative
uncharacterized protein - Nitratiruptor sp. (strain
SB155-2)
Length = 213
Score = 30.3 bits (65), Expect = 9.9
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 30 GVGLPXLMRPFSLSSMSALLAREPRTFNLSDTTAGVISLYCGTSLY 167
GV L LM + +S ++ L + + ++ TAGVISL GT+++
Sbjct: 167 GVMLVFLMFGYFISLINENLLKTQKNIRVAFATAGVISLIVGTNMF 212
>UniRef50_A7SW98 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 534
Score = 30.3 bits (65), Expect = 9.9
Identities = 14/34 (41%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = -1
Query: 323 GREGFGQTASKNT-EEEGRIRWRQSQEEEVVQRK 225
G EG + SK + E+EG+I+ R+ +E+EV +R+
Sbjct: 142 GNEGVEERESKGSKEDEGKIKGREVEEKEVKERE 175
>UniRef50_A5KCN0 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 814
Score = 30.3 bits (65), Expect = 9.9
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -1
Query: 341 KDAAQEGREGFGQTAS--KNTEEEGRIRWRQSQEEEVVQRKSS*QVEQP 201
++AA+EG G+ A + TEEE ++ EEE V+ + VE+P
Sbjct: 580 EEAAEEGEAAEGEVAEGEEATEEEEAAEGAEAAEEEAVEGEKEEVVEEP 628
>UniRef50_A5K7J0 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 732
Score = 30.3 bits (65), Expect = 9.9
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -1
Query: 341 KDAAQEGREGFGQTASKNTEEEGRIRWRQSQEE 243
++AAQEGR+ G T+ +NT EG+ R + E
Sbjct: 371 EEAAQEGRQAKGSTSERNT-VEGKTRGNEQNNE 402
>UniRef50_A2E073 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 385
Score = 30.3 bits (65), Expect = 9.9
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -1
Query: 320 REGFGQTASKNTEEEGRIRWRQSQEEEVVQ 231
RE +T KN+EEEG+ R ++EE VQ
Sbjct: 250 REDVSKTQKKNSEEEGKQRRALRKDEEAVQ 279
>UniRef50_Q8PXK8 Cluster: Conserved protein; n=3;
Methanosarcina|Rep: Conserved protein - Methanosarcina
mazei (Methanosarcina frisia)
Length = 239
Score = 30.3 bits (65), Expect = 9.9
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = -2
Query: 211 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLK 107
LN Q L+ K ++KLY+ P Y LIT +E LK
Sbjct: 199 LNTQ-LYIKTRHKKLYEWTPYYSLITDEASAEELK 232
>UniRef50_Q9R1M3 Cluster: Testis-specific Y-encoded protein 1; n=8;
Muroidea|Rep: Testis-specific Y-encoded protein 1 -
Rattus norvegicus (Rat)
Length = 334
Score = 30.3 bits (65), Expect = 9.9
Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = +1
Query: 181 WVYQTTPGCSTCHELFLWTTSSSWLCRHRILPS---SSVFFEAVWPKP 315
W+ Q G + C + T +WLC H+ S + + + +WP P
Sbjct: 277 WIGQAEHGYANCMQDTTRLTFFNWLCAHKFPGSNRIAEIIMDDLWPNP 324
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 364,152,667
Number of Sequences: 1657284
Number of extensions: 7156182
Number of successful extensions: 24864
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 23843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24809
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11514999177
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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