Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14a12
(796 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011453-1|AAR99111.1| 243|Drosophila melanogaster RE36486p pro... 301 7e-82
AE014296-1726|AAF50212.1| 243|Drosophila melanogaster CG8189-PA... 301 7e-82
Y08967-1|CAA70164.1| 184|Drosophila melanogaster Fo-ATP synthas... 254 1e-67
BT004878-1|AAO45234.1| 159|Drosophila melanogaster GM13038p pro... 206 2e-53
AE014296-1727|AAN11955.1| 159|Drosophila melanogaster CG8189-PB... 206 2e-53
BT022311-1|AAY54727.1| 163|Drosophila melanogaster IP08241p pro... 57 3e-08
BT015306-1|AAT94534.1| 194|Drosophila melanogaster AT16129p pro... 57 3e-08
AE014296-2245|AAF49841.1| 152|Drosophila melanogaster CG17300-P... 57 3e-08
AJ437578-1|CAD26833.1| 221|Drosophila melanogaster putative glu... 33 0.34
AE013599-2684|AAF57693.1| 221|Drosophila melanogaster CG17534-P... 33 0.34
Y17919-1|CAA76939.1| 1379|Drosophila melanogaster Pollux protein... 33 0.59
U65431-1|AAB64082.1| 1761|Drosophila melanogaster collagen type ... 33 0.59
AY118691-1|AAM50551.1| 1230|Drosophila melanogaster AT16851p pro... 33 0.59
AE014297-3462|AAN13982.2| 1230|Drosophila melanogaster CG6129-PC... 33 0.59
AE014297-3461|AAF56238.3| 2048|Drosophila melanogaster CG6129-PB... 33 0.59
BT025850-1|ABF85750.1| 1260|Drosophila melanogaster IP14919p pro... 32 0.79
AE014297-334|AAF51967.1| 1379|Drosophila melanogaster CG1093-PA,... 32 0.79
BT016106-1|AAV36991.1| 840|Drosophila melanogaster LD20133p pro... 30 3.2
AY058616-1|AAL13845.1| 508|Drosophila melanogaster LD30988p pro... 30 3.2
AF229928-1|AAF33404.1| 554|Drosophila melanogaster cytoplasmic ... 30 3.2
AF227210-1|AAF43016.1| 604|Drosophila melanogaster AAA family p... 30 3.2
AF227209-1|AAF43014.1| 604|Drosophila melanogaster AAA family p... 30 3.2
AE014298-1168|AAF46366.1| 926|Drosophila melanogaster CG10555-P... 30 3.2
AE014297-2170|AAF55289.2| 604|Drosophila melanogaster CG6815-PA... 30 3.2
AY119053-1|AAM50913.1| 358|Drosophila melanogaster LP06940p pro... 29 5.5
AE014298-2631|AAF48780.2| 358|Drosophila melanogaster CG6788-PA... 29 5.5
BT030441-1|ABO52861.1| 759|Drosophila melanogaster RE42355p pro... 29 7.3
AY118891-1|AAM50751.1| 1508|Drosophila melanogaster LD01189p pro... 29 7.3
AY052025-1|AAK93449.1| 1183|Drosophila melanogaster LD47622p pro... 29 7.3
AE014296-2897|AAF49349.4| 926|Drosophila melanogaster CG13731-P... 29 7.3
AE014134-313|ABI31283.1| 1504|Drosophila melanogaster CG7337-PB,... 29 7.3
AE014134-312|ABI31282.1| 2347|Drosophila melanogaster CG7337-PC,... 29 7.3
AE014134-311|AAF51327.2| 1508|Drosophila melanogaster CG7337-PA,... 29 7.3
M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collag... 29 9.7
M90422-1|AAA28741.1| 270|Drosophila melanogaster p40 protein. 29 9.7
M77133-1|AAA28667.1| 253|Drosophila melanogaster laminin recept... 29 9.7
M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type I... 29 9.7
J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV pro-co... 29 9.7
BT029094-1|ABJ17027.1| 270|Drosophila melanogaster IP12946p pro... 29 9.7
AY118899-1|AAM50759.1| 270|Drosophila melanogaster LD09376p pro... 29 9.7
AY118400-1|AAM48429.1| 608|Drosophila melanogaster RE60058p pro... 29 9.7
AL031027-8|CAA19839.1| 270|Drosophila melanogaster EG:80H7.6,FB... 29 9.7
AE014298-225|AAN09049.1| 270|Drosophila melanogaster CG14792-PB... 29 9.7
AE014298-224|AAF45638.2| 270|Drosophila melanogaster CG14792-PA... 29 9.7
AE014298-223|AAN09050.2| 313|Drosophila melanogaster CG14792-PD... 29 9.7
AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,... 29 9.7
AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,... 29 9.7
AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,... 29 9.7
AE013599-2369|AAF57936.2| 608|Drosophila melanogaster CG8910-PA... 29 9.7
>BT011453-1|AAR99111.1| 243|Drosophila melanogaster RE36486p
protein.
Length = 243
Score = 301 bits (739), Expect = 7e-82
Identities = 145/241 (60%), Positives = 178/241 (73%)
Frame = -3
Query: 746 MLSRVALRSGASKQTACTALVARGSASDVATHDQKTFARPVRGEPGKVRLGFIPEEWFQF 567
M SR AL + T A +A+ +++ RP PGKVRLGF+PEEWFQF
Sbjct: 1 MFSRAALLTAQRPLTVAATRSAAAAAAPGGAIERRQ--RPEH--PGKVRLGFLPEEWFQF 56
Query: 566 FHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMVYVAHVKFGPKLAAWLDK 387
F++KTGVTGPYTFGVGL TYLCSKEIYVMEHEYYSGLSL +M +A K GP +A W D
Sbjct: 57 FYNKTGVTGPYTFGVGLITYLCSKEIYVMEHEYYSGLSLGIMAIIAVKKLGPVIAKWADG 116
Query: 386 EVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERL 207
E++ E+EW EGR +K L DAIE EK EQWRA G LL++AKKEN+ LQLEAA+RER
Sbjct: 117 EIDKIESEWKEGREAELKVLSDAIEAEKKEQWRADGALLLMEAKKENIALQLEAAFRERA 176
Query: 206 MYAYTEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITPDQEKQALDRCIADLASL 27
M Y+EVKRRLDYQ+E +VERRL+QKHMV+WI +NV +I+P QEK+ L++CIADL++L
Sbjct: 177 MNVYSEVKRRLDYQVECRHVERRLSQKHMVNWITTNVLASISPQQEKETLNKCIADLSAL 236
Query: 26 A 24
A
Sbjct: 237 A 237
>AE014296-1726|AAF50212.1| 243|Drosophila melanogaster CG8189-PA,
isoform A protein.
Length = 243
Score = 301 bits (739), Expect = 7e-82
Identities = 145/241 (60%), Positives = 178/241 (73%)
Frame = -3
Query: 746 MLSRVALRSGASKQTACTALVARGSASDVATHDQKTFARPVRGEPGKVRLGFIPEEWFQF 567
M SR AL + T A +A+ +++ RP PGKVRLGF+PEEWFQF
Sbjct: 1 MFSRAALLTAQRPLTVAATRSAAAAAAPGGAIERRQ--RPEH--PGKVRLGFLPEEWFQF 56
Query: 566 FHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMVYVAHVKFGPKLAAWLDK 387
F++KTGVTGPYTFGVGL TYLCSKEIYVMEHEYYSGLSL +M +A K GP +A W D
Sbjct: 57 FYNKTGVTGPYTFGVGLITYLCSKEIYVMEHEYYSGLSLGIMAIIAVKKLGPVIAKWADG 116
Query: 386 EVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERL 207
E++ E+EW EGR +K L DAIE EK EQWRA G LL++AKKEN+ LQLEAA+RER
Sbjct: 117 EIDKIESEWKEGREAELKVLSDAIEAEKKEQWRADGALLLMEAKKENIALQLEAAFRERA 176
Query: 206 MYAYTEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITPDQEKQALDRCIADLASL 27
M Y+EVKRRLDYQ+E +VERRL+QKHMV+WI +NV +I+P QEK+ L++CIADL++L
Sbjct: 177 MNVYSEVKRRLDYQVECRHVERRLSQKHMVNWITTNVLASISPQQEKETLNKCIADLSAL 236
Query: 26 A 24
A
Sbjct: 237 A 237
>Y08967-1|CAA70164.1| 184|Drosophila melanogaster Fo-ATP synthase
subunit b protein.
Length = 184
Score = 254 bits (621), Expect = 1e-67
Identities = 117/178 (65%), Positives = 141/178 (79%)
Frame = -3
Query: 557 KTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMVYVAHVKFGPKLAAWLDKEVE 378
KTGVTGPYTFGVGL TYLCSKEIYVMEHEYYSGLSL +M +A K GP +A W D E++
Sbjct: 1 KTGVTGPYTFGVGLITYLCSKEIYVMEHEYYSGLSLGIMAIIAVKKLGPVIAKWADGEID 60
Query: 377 ATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYA 198
E+EW EGR +K L DAIE EK EQWRA G LL++AKKEN+ LQLEAA+RER M
Sbjct: 61 KIESEWKEGREAELKVLSDAIEAEKKEQWRADGALLLMEAKKENIALQLEAAFRERAMNV 120
Query: 197 YTEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITPDQEKQALDRCIADLASLA 24
Y+EV R LDYQ+E +VERRL+QKHMV+WI +NV +I+P QEK+ L++CIADL++LA
Sbjct: 121 YSEVNRPLDYQVECRHVERRLSQKHMVNWITTNVLASISPQQEKETLNKCIADLSALA 178
>BT004878-1|AAO45234.1| 159|Drosophila melanogaster GM13038p
protein.
Length = 159
Score = 206 bits (504), Expect = 2e-53
Identities = 95/153 (62%), Positives = 119/153 (77%)
Frame = -3
Query: 482 MEHEYYSGLSLLVMVYVAHVKFGPKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEK 303
MEHEYYSGLSL +M +A K GP +A W D E++ E+EW EGR +K L DAIE EK
Sbjct: 1 MEHEYYSGLSLGIMAIIAVKKLGPVIAKWADGEIDKIESEWKEGREAELKVLSDAIEAEK 60
Query: 302 TEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYAYTEVKRRLDYQLEKSNVERRLAQKH 123
EQWRA G LL++AKKEN+ LQLEAA+RER M Y+EVKRRLDYQ+E +VERRL+QKH
Sbjct: 61 KEQWRADGALLLMEAKKENIALQLEAAFRERAMNVYSEVKRRLDYQVECRHVERRLSQKH 120
Query: 122 MVDWIVSNVTKAITPDQEKQALDRCIADLASLA 24
MV+WI +NV +I+P QEK+ L++CIADL++LA
Sbjct: 121 MVNWITTNVLASISPQQEKETLNKCIADLSALA 153
>AE014296-1727|AAN11955.1| 159|Drosophila melanogaster CG8189-PB,
isoform B protein.
Length = 159
Score = 206 bits (504), Expect = 2e-53
Identities = 95/153 (62%), Positives = 119/153 (77%)
Frame = -3
Query: 482 MEHEYYSGLSLLVMVYVAHVKFGPKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEK 303
MEHEYYSGLSL +M +A K GP +A W D E++ E+EW EGR +K L DAIE EK
Sbjct: 1 MEHEYYSGLSLGIMAIIAVKKLGPVIAKWADGEIDKIESEWKEGREAELKVLSDAIEAEK 60
Query: 302 TEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYAYTEVKRRLDYQLEKSNVERRLAQKH 123
EQWRA G LL++AKKEN+ LQLEAA+RER M Y+EVKRRLDYQ+E +VERRL+QKH
Sbjct: 61 KEQWRADGALLLMEAKKENIALQLEAAFRERAMNVYSEVKRRLDYQVECRHVERRLSQKH 120
Query: 122 MVDWIVSNVTKAITPDQEKQALDRCIADLASLA 24
MV+WI +NV +I+P QEK+ L++CIADL++LA
Sbjct: 121 MVNWITTNVLASISPQQEKETLNKCIADLSALA 153
>BT022311-1|AAY54727.1| 163|Drosophila melanogaster IP08241p
protein.
Length = 163
Score = 56.8 bits (131), Expect = 3e-08
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 14/130 (10%)
Frame = -3
Query: 674 SASDVATHDQKTFAR-PVRGEPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCS 498
++ TH + +R P G PGKVR GF + W V GP GVGL Y+CS
Sbjct: 25 TSRSATTHSAQGLSRLPGHGSPGKVRPGFPSDNW---------VKGP--MGVGLLAYICS 73
Query: 497 KEIYVMEHE-------------YYSGLSLLVMVYVAHVKFGPKLAAWLDKEVEATENEWN 357
+ ++HE Y SG+++ ++ A ++ P + W D E+ E+E+
Sbjct: 74 GDCCAIKHEHSGLSLGIMEDGYYSSGITIGILTTFAVIRLLPAIVKWADSEIIKIESEYE 133
Query: 356 EGRNQTVKAL 327
+ R +K L
Sbjct: 134 KSRETKIKVL 143
>BT015306-1|AAT94534.1| 194|Drosophila melanogaster AT16129p
protein.
Length = 194
Score = 56.8 bits (131), Expect = 3e-08
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 14/130 (10%)
Frame = -3
Query: 674 SASDVATHDQKTFAR-PVRGEPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCS 498
++ TH + +R P G PGKVR GF + W V GP GVGL Y+CS
Sbjct: 56 TSRSATTHSAQGLSRLPGHGSPGKVRPGFPSDNW---------VKGP--MGVGLLAYICS 104
Query: 497 KEIYVMEHE-------------YYSGLSLLVMVYVAHVKFGPKLAAWLDKEVEATENEWN 357
+ ++HE Y SG+++ ++ A ++ P + W D E+ E+E+
Sbjct: 105 GDCCAIKHEHSGLSLGIMEDGYYSSGITIGILTTFAVIRLLPAIVKWADSEIIKIESEYE 164
Query: 356 EGRNQTVKAL 327
+ R +K L
Sbjct: 165 KSRETKIKVL 174
>AE014296-2245|AAF49841.1| 152|Drosophila melanogaster CG17300-PA
protein.
Length = 152
Score = 56.8 bits (131), Expect = 3e-08
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 14/130 (10%)
Frame = -3
Query: 674 SASDVATHDQKTFAR-PVRGEPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCS 498
++ TH + +R P G PGKVR GF + W V GP GVGL Y+CS
Sbjct: 14 TSRSATTHSAQGLSRLPGHGSPGKVRPGFPSDNW---------VKGP--MGVGLLAYICS 62
Query: 497 KEIYVMEHE-------------YYSGLSLLVMVYVAHVKFGPKLAAWLDKEVEATENEWN 357
+ ++HE Y SG+++ ++ A ++ P + W D E+ E+E+
Sbjct: 63 GDCCAIKHEHSGLSLGIMEDGYYSSGITIGILTTFAVIRLLPAIVKWADSEIIKIESEYE 122
Query: 356 EGRNQTVKAL 327
+ R +K L
Sbjct: 123 KSRETKIKVL 132
>AJ437578-1|CAD26833.1| 221|Drosophila melanogaster putative
glutathione S-transferase protein.
Length = 221
Score = 33.5 bits (73), Expect = 0.34
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -3
Query: 524 VGLATYLCSKEIYVMEHEYYSGLSLLVMVYVAHVKFGPKLAAWLDK 387
+G YLC I + ++ S +S LV + K PKL WLD+
Sbjct: 146 IGNQAYLCGPVITIADYSVVSSVSSLVGLAAIDAKRYPKLNGWLDR 191
>AE013599-2684|AAF57693.1| 221|Drosophila melanogaster CG17534-PA
protein.
Length = 221
Score = 33.5 bits (73), Expect = 0.34
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -3
Query: 524 VGLATYLCSKEIYVMEHEYYSGLSLLVMVYVAHVKFGPKLAAWLDK 387
+G YLC I + ++ S +S LV + K PKL WLD+
Sbjct: 146 IGNQAYLCGPVITIADYSVVSSVSSLVGLAAIDAKRYPKLNGWLDR 191
>Y17919-1|CAA76939.1| 1379|Drosophila melanogaster Pollux protein
protein.
Length = 1379
Score = 32.7 bits (71), Expect = 0.59
Identities = 24/95 (25%), Positives = 38/95 (40%)
Frame = -2
Query: 312 GREDGAVARAGTGAPHPGQEGERAPAARGRLQGEAHVRLH*GEAASGLPAREVERGASSR 133
G E+GA R P + ++P R L+G++ + L E + G +
Sbjct: 215 GAEEGAAPR-----PLEDNKENKSPEKRPLLRGQSQIELGHKEHSDGSQPSAANSQLEAP 269
Query: 132 PEAHGRLDSEQRDQGDHSGPGEAGAGPLHRGPGFA 28
+ + RDQG +G A AGP P +A
Sbjct: 270 NVIVNKQPTPPRDQGVGTGTASASAGPSQLHPNYA 304
>U65431-1|AAB64082.1| 1761|Drosophila melanogaster collagen type IV
alpha 2 protein.
Length = 1761
Score = 32.7 bits (71), Expect = 0.59
Identities = 28/95 (29%), Positives = 33/95 (34%), Gaps = 2/95 (2%)
Frame = -2
Query: 303 DGAVARAGTGAP--HPGQEGERAPAARGRLQGEAHVRLH*GEAASGLPAREVERGASSRP 130
DG R G P PGQ G R P + R QG GE + RG + +P
Sbjct: 122 DGCDGRPGMQGPSGRPGQNGVRGPPGKSRQQGPPGEA---GEGGINSKGTKGNRGETGQP 178
Query: 129 EAHGRLDSEQRDQGDHSGPGEAGAGPLHRGPGFAG 25
G D+G G AG PG G
Sbjct: 179 GGVGP-PGFDGDRGSKGDTGYAGLTGEKGDPGLPG 212
>AY118691-1|AAM50551.1| 1230|Drosophila melanogaster AT16851p
protein.
Length = 1230
Score = 32.7 bits (71), Expect = 0.59
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 2/115 (1%)
Frame = -3
Query: 401 AWLDKEVEATENEWNEGRNQTVKALEDAIE--GEKTEQWRAQGQELLIQAKKENVLLQLE 228
A L KE+E + + E + Q + A A +K +A +E + +E +LQL
Sbjct: 111 ARLQKELEQCQRKAQETKTQLLNAARAAESDFNQKIANLQACAEEAAKRHGEE--ILQLR 168
Query: 227 AAYRERLMYAYTEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITPDQEKQ 63
A +R+ A ++ D ++EK Q H+ + + I + EKQ
Sbjct: 169 NALEKRMQQALQALQTAKDDEIEKLQERLATLQAHLESLVQQHEEALIRAESEKQ 223
>AE014297-3462|AAN13982.2| 1230|Drosophila melanogaster CG6129-PC,
isoform C protein.
Length = 1230
Score = 32.7 bits (71), Expect = 0.59
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 2/115 (1%)
Frame = -3
Query: 401 AWLDKEVEATENEWNEGRNQTVKALEDAIE--GEKTEQWRAQGQELLIQAKKENVLLQLE 228
A L KE+E + + E + Q + A A +K +A +E + +E +LQL
Sbjct: 111 ARLQKELEQCQRKAQETKTQLLNAARAAESDFNQKIANLQACAEEAAKRHGEE--ILQLR 168
Query: 227 AAYRERLMYAYTEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITPDQEKQ 63
A +R+ A ++ D ++EK Q H+ + + I + EKQ
Sbjct: 169 NALEKRMQQALQALQTAKDDEIEKLQERLATLQAHLESLVQQHEEALIRAESEKQ 223
>AE014297-3461|AAF56238.3| 2048|Drosophila melanogaster CG6129-PB,
isoform B protein.
Length = 2048
Score = 32.7 bits (71), Expect = 0.59
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 2/115 (1%)
Frame = -3
Query: 401 AWLDKEVEATENEWNEGRNQTVKALEDAIE--GEKTEQWRAQGQELLIQAKKENVLLQLE 228
A L KE+E + + E + Q + A A +K +A +E + +E +LQL
Sbjct: 929 ARLQKELEQCQRKAQETKTQLLNAARAAESDFNQKIANLQACAEEAAKRHGEE--ILQLR 986
Query: 227 AAYRERLMYAYTEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITPDQEKQ 63
A +R+ A ++ D ++EK Q H+ + + I + EKQ
Sbjct: 987 NALEKRMQQALQALQTAKDDEIEKLQERLATLQAHLESLVQQHEEALIRAESEKQ 1041
>BT025850-1|ABF85750.1| 1260|Drosophila melanogaster IP14919p
protein.
Length = 1260
Score = 32.3 bits (70), Expect = 0.79
Identities = 24/95 (25%), Positives = 38/95 (40%)
Frame = -2
Query: 312 GREDGAVARAGTGAPHPGQEGERAPAARGRLQGEAHVRLH*GEAASGLPAREVERGASSR 133
G E+GA R P + ++P R L+G++ + L E + G +
Sbjct: 96 GAEEGAAPR-----PLEDNKENKSPEKRPLLRGQSQIELGHKEHSDGSQPLAANSQLEAP 150
Query: 132 PEAHGRLDSEQRDQGDHSGPGEAGAGPLHRGPGFA 28
+ + RDQG +G A AGP P +A
Sbjct: 151 NVIVNKQPTPPRDQGVGTGTASASAGPSQLHPNYA 185
>AE014297-334|AAF51967.1| 1379|Drosophila melanogaster CG1093-PA,
isoform A protein.
Length = 1379
Score = 32.3 bits (70), Expect = 0.79
Identities = 24/95 (25%), Positives = 38/95 (40%)
Frame = -2
Query: 312 GREDGAVARAGTGAPHPGQEGERAPAARGRLQGEAHVRLH*GEAASGLPAREVERGASSR 133
G E+GA R P + ++P R L+G++ + L E + G +
Sbjct: 215 GAEEGAAPR-----PLEDNKENKSPEKRPLLRGQSQIELGHKEHSDGSQPLAANSQLEAP 269
Query: 132 PEAHGRLDSEQRDQGDHSGPGEAGAGPLHRGPGFA 28
+ + RDQG +G A AGP P +A
Sbjct: 270 NVIVNKQPTPPRDQGVGTGTASASAGPSQLHPNYA 304
>BT016106-1|AAV36991.1| 840|Drosophila melanogaster LD20133p
protein.
Length = 840
Score = 30.3 bits (65), Expect = 3.2
Identities = 29/100 (29%), Positives = 37/100 (37%)
Frame = -2
Query: 309 REDGAVARAGTGAPHPGQEGERAPAARGRLQGEAHVRLH*GEAASGLPAREVERGASSRP 130
++ A A G GAP PG P G + A S P + GA
Sbjct: 558 QQQQAAAGGGAGAP-PGSSYPGGPPTSGAAPPPPPGGAYSTTAPSQTPPPQGGGGAGGGN 616
Query: 129 EAHGRLDSEQRDQGDHSGPGEAGAGPLHRGPGFAGQEVNG 10
+++Q G G GAGP GPG AGQ+ G
Sbjct: 617 NNPNGPNAQQSTPPPQGGAG-GGAGP--SGPGGAGQQYAG 653
>AY058616-1|AAL13845.1| 508|Drosophila melanogaster LD30988p
protein.
Length = 508
Score = 30.3 bits (65), Expect = 3.2
Identities = 21/88 (23%), Positives = 41/88 (46%)
Frame = -3
Query: 317 IEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYAYTEVKRRLDYQLEKSNVERR 138
IE K +Q RAQ Q+ L + + E+ LLQ + E L V+R+ + + E
Sbjct: 126 IEETKQQQQRAQYQDQLSRKRYEDQLLQQQRVQEENLRKQEESVQRQEAMRRQTIEHEIE 185
Query: 137 LAQKHMVDWIVSNVTKAITPDQEKQALD 54
+ +K+ + + + D+E + ++
Sbjct: 186 MKEKNRLKLLEHELRAKARVDRENRDIN 213
>AF229928-1|AAF33404.1| 554|Drosophila melanogaster cytoplasmic
protein 89BC protein.
Length = 554
Score = 30.3 bits (65), Expect = 3.2
Identities = 21/88 (23%), Positives = 41/88 (46%)
Frame = -3
Query: 317 IEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYAYTEVKRRLDYQLEKSNVERR 138
IE K +Q RAQ Q+ L + + E+ LLQ + E L V+R+ + + E
Sbjct: 76 IEETKQQQQRAQYQDQLSRKRYEDQLLQQQRVQEENLRKQEESVQRQEAMRRQTIEHEIE 135
Query: 137 LAQKHMVDWIVSNVTKAITPDQEKQALD 54
+ +K+ + + + D+E + ++
Sbjct: 136 MKEKNRLKLLEHELRAKARVDRENRDIN 163
>AF227210-1|AAF43016.1| 604|Drosophila melanogaster AAA family
protein Bor protein.
Length = 604
Score = 30.3 bits (65), Expect = 3.2
Identities = 21/88 (23%), Positives = 41/88 (46%)
Frame = -3
Query: 317 IEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYAYTEVKRRLDYQLEKSNVERR 138
IE K +Q RAQ Q+ L + + E+ LLQ + E L V+R+ + + E
Sbjct: 126 IEETKQQQQRAQYQDQLSRKRYEDQLLQQQRVQEENLRKQEESVQRQEAMRRQTIEHEIE 185
Query: 137 LAQKHMVDWIVSNVTKAITPDQEKQALD 54
+ +K+ + + + D+E + ++
Sbjct: 186 MKEKNRLKLLEHELRAKARVDRENRDIN 213
>AF227209-1|AAF43014.1| 604|Drosophila melanogaster AAA family
protein Bor protein.
Length = 604
Score = 30.3 bits (65), Expect = 3.2
Identities = 21/88 (23%), Positives = 41/88 (46%)
Frame = -3
Query: 317 IEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYAYTEVKRRLDYQLEKSNVERR 138
IE K +Q RAQ Q+ L + + E+ LLQ + E L V+R+ + + E
Sbjct: 126 IEETKQQQQRAQYQDQLSRKRYEDQLLQQQRVQEENLRKQEESVQRQEAMRRQTIEHEIE 185
Query: 137 LAQKHMVDWIVSNVTKAITPDQEKQALD 54
+ +K+ + + + D+E + ++
Sbjct: 186 MKEKNRLKLLEHELRAKARVDRENRDIN 213
>AE014298-1168|AAF46366.1| 926|Drosophila melanogaster CG10555-PA
protein.
Length = 926
Score = 30.3 bits (65), Expect = 3.2
Identities = 29/100 (29%), Positives = 37/100 (37%)
Frame = -2
Query: 309 REDGAVARAGTGAPHPGQEGERAPAARGRLQGEAHVRLH*GEAASGLPAREVERGASSRP 130
++ A A G GAP PG P G + A S P + GA
Sbjct: 644 QQQQAAAGGGAGAP-PGSSYPGGPPTSGAAPPPPPGGAYSTTAPSQTPPPQGGGGAGGGN 702
Query: 129 EAHGRLDSEQRDQGDHSGPGEAGAGPLHRGPGFAGQEVNG 10
+++Q G G GAGP GPG AGQ+ G
Sbjct: 703 NNPNGPNAQQSTPPPQGGAG-GGAGP--SGPGGAGQQYAG 739
>AE014297-2170|AAF55289.2| 604|Drosophila melanogaster CG6815-PA
protein.
Length = 604
Score = 30.3 bits (65), Expect = 3.2
Identities = 21/88 (23%), Positives = 41/88 (46%)
Frame = -3
Query: 317 IEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYAYTEVKRRLDYQLEKSNVERR 138
IE K +Q RAQ Q+ L + + E+ LLQ + E L V+R+ + + E
Sbjct: 126 IEETKQQQQRAQYQDQLSRKRYEDQLLQQQRVQEENLRKQEESVQRQEAMRRQTIEHEIE 185
Query: 137 LAQKHMVDWIVSNVTKAITPDQEKQALD 54
+ +K+ + + + D+E + ++
Sbjct: 186 MKEKNRLKLLEHELRAKARVDRENRDIN 213
>AY119053-1|AAM50913.1| 358|Drosophila melanogaster LP06940p
protein.
Length = 358
Score = 29.5 bits (63), Expect = 5.5
Identities = 20/77 (25%), Positives = 38/77 (49%)
Frame = -3
Query: 347 NQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYAYTEVKRRLDY 168
++T+K L+ I G K E Q ++ Q+ + NVL++ R + A E+K + D
Sbjct: 70 SETIKDLQTRI-GHKNELLLLQAGQIKDQSARLNVLIKNMKVLRSECLNAQAEIKSK-DI 127
Query: 167 QLEKSNVERRLAQKHMV 117
Q++ S + + +V
Sbjct: 128 QIQLSAAKIKQMSNELV 144
>AE014298-2631|AAF48780.2| 358|Drosophila melanogaster CG6788-PA
protein.
Length = 358
Score = 29.5 bits (63), Expect = 5.5
Identities = 20/77 (25%), Positives = 38/77 (49%)
Frame = -3
Query: 347 NQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYAYTEVKRRLDY 168
++T+K L+ I G K E Q ++ Q+ + NVL++ R + A E+K + D
Sbjct: 70 SETIKDLQTRI-GHKNELLLLQAGQIKDQSARLNVLIKNMKVLRSECLNAQAEIKSK-DI 127
Query: 167 QLEKSNVERRLAQKHMV 117
Q++ S + + +V
Sbjct: 128 QIQLSAAKIKQMSNELV 144
>BT030441-1|ABO52861.1| 759|Drosophila melanogaster RE42355p
protein.
Length = 759
Score = 29.1 bits (62), Expect = 7.3
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = -2
Query: 267 HPGQEGERAPAARGRLQGEAHVRLH*GEAASGLPAREVERGASSRPEAHGRLDSEQRDQG 88
H R+ + R LQG+ G AS + +G+ S PE RL S QG
Sbjct: 497 HRNGNVSRSASKRNSLQGKT------GLGASSNSMNVLNQGSDSEPEDSNRLRSASNGQG 550
Query: 87 DHSGP 73
+GP
Sbjct: 551 RSNGP 555
>AY118891-1|AAM50751.1| 1508|Drosophila melanogaster LD01189p protein.
Length = 1508
Score = 29.1 bits (62), Expect = 7.3
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = -2
Query: 267 HPGQEGERAPAARGRLQGEAHVRLH*GEAASGLPAREVERGASSRPEAHGRLDSEQRDQG 88
H R+ + R LQG+ G AS + +G+ S PE RL S QG
Sbjct: 1246 HRNGNVSRSASKRNSLQGKT------GLGASSNSMNVLNQGSDSEPEDSNRLRSASNGQG 1299
Query: 87 DHSGP 73
+GP
Sbjct: 1300 RSNGP 1304
>AY052025-1|AAK93449.1| 1183|Drosophila melanogaster LD47622p protein.
Length = 1183
Score = 29.1 bits (62), Expect = 7.3
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = -2
Query: 267 HPGQEGERAPAARGRLQGEAHVRLH*GEAASGLPAREVERGASSRPEAHGRLDSEQRDQG 88
H R+ + R LQG+ G AS + +G+ S PE RL S QG
Sbjct: 921 HRNGNVSRSASKRNSLQGKT------GLGASSNSMNVLNQGSDSEPEDSNRLRSASNGQG 974
Query: 87 DHSGP 73
+GP
Sbjct: 975 RSNGP 979
>AE014296-2897|AAF49349.4| 926|Drosophila melanogaster CG13731-PA
protein.
Length = 926
Score = 29.1 bits (62), Expect = 7.3
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = +2
Query: 287 RATAPSSLPQLRPPVLSRFGSDLRSIRSRSLQLPCPTKRPTLVRISRELHTP*PTVTVRS 466
R P + P +PP +R+ R+ PT+ PT +R L TP PT +
Sbjct: 426 RPPPPPTRPPTKPPTTYLPPVTVRTTRATPPPTRPPTRPPTYPPTTRRLTTPAPTYLPPT 485
Query: 467 NIRAP 481
N P
Sbjct: 486 NKPLP 490
Score = 29.1 bits (62), Expect = 7.3
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = +2
Query: 287 RATAPSSLPQLRPPVLSRFGSDLRSIRSRSLQLPCPTKRPTLVRISRELHTP*PTVTVRS 466
R P + P +PP +R+ R+ PT+ PT +R L TP PT +
Sbjct: 637 RPPPPPTRPPTKPPTTYLPPVTVRTTRATPPPTRPPTRPPTYPPTTRRLTTPAPTYLPPT 696
Query: 467 NIRAP 481
N P
Sbjct: 697 NKPLP 701
Score = 29.1 bits (62), Expect = 7.3
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = +2
Query: 287 RATAPSSLPQLRPPVLSRFGSDLRSIRSRSLQLPCPTKRPTLVRISRELHTP*PTVTVRS 466
R P + P +PP +R+ R+ PT+ PT +R L TP PT +
Sbjct: 740 RPPPPPTRPPTKPPTTYLPPVTVRTTRATPPPTRPPTRPPTYPPTTRRLTTPAPTYLPPT 799
Query: 467 NIRAP 481
N P
Sbjct: 800 NKPLP 804
>AE014134-313|ABI31283.1| 1504|Drosophila melanogaster CG7337-PB,
isoform B protein.
Length = 1504
Score = 29.1 bits (62), Expect = 7.3
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = -2
Query: 267 HPGQEGERAPAARGRLQGEAHVRLH*GEAASGLPAREVERGASSRPEAHGRLDSEQRDQG 88
H R+ + R LQG+ G AS + +G+ S PE RL S QG
Sbjct: 1242 HRNGNVSRSASKRNSLQGKT------GLGASSNSMNVLNQGSDSEPEDSNRLRSASNGQG 1295
Query: 87 DHSGP 73
+GP
Sbjct: 1296 RSNGP 1300
>AE014134-312|ABI31282.1| 2347|Drosophila melanogaster CG7337-PC,
isoform C protein.
Length = 2347
Score = 29.1 bits (62), Expect = 7.3
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = -2
Query: 267 HPGQEGERAPAARGRLQGEAHVRLH*GEAASGLPAREVERGASSRPEAHGRLDSEQRDQG 88
H R+ + R LQG+ G AS + +G+ S PE RL S QG
Sbjct: 2085 HRNGNVSRSASKRNSLQGKT------GLGASSNSMNVLNQGSDSEPEDSNRLRSASNGQG 2138
Query: 87 DHSGP 73
+GP
Sbjct: 2139 RSNGP 2143
>AE014134-311|AAF51327.2| 1508|Drosophila melanogaster CG7337-PA,
isoform A protein.
Length = 1508
Score = 29.1 bits (62), Expect = 7.3
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = -2
Query: 267 HPGQEGERAPAARGRLQGEAHVRLH*GEAASGLPAREVERGASSRPEAHGRLDSEQRDQG 88
H R+ + R LQG+ G AS + +G+ S PE RL S QG
Sbjct: 1246 HRNGNVSRSASKRNSLQGKT------GLGASSNSMNVLNQGSDSEPEDSNRLRSASNGQG 1299
Query: 87 DHSGP 73
+GP
Sbjct: 1300 RSNGP 1304
>M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collagen
protein.
Length = 1775
Score = 28.7 bits (61), Expect = 9.7
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -2
Query: 174 GLPAREVERGASSRPEAHGRLDSEQRDQGDHSGPGEAGAGPLHRGPGFAGQEVNGSE 4
GL R+ E G PE LD ++ ++G GPG+ G PG GQ+ + E
Sbjct: 307 GLVGRKGEPG----PEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGE 359
>M90422-1|AAA28741.1| 270|Drosophila melanogaster p40 protein.
Length = 270
Score = 28.7 bits (61), Expect = 9.7
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -3
Query: 413 PKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQ 276
PK+ +D VE T N +E +TV +ED E W + GQ
Sbjct: 224 PKIEEAVDHPVEETTNWADEVAAETVGGVEDWNEDTVKTSWGSDGQ 269
>M77133-1|AAA28667.1| 253|Drosophila melanogaster laminin receptor
protein.
Length = 253
Score = 28.7 bits (61), Expect = 9.7
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -3
Query: 413 PKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQ 276
PK+ +D VE T N +E +TV +ED E W + GQ
Sbjct: 207 PKIEEAVDHPVEETTNWADEVAAETVGGVEDWNEDTVKTSWGSDGQ 252
>M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type IV
collagen protein.
Length = 1775
Score = 28.7 bits (61), Expect = 9.7
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -2
Query: 174 GLPAREVERGASSRPEAHGRLDSEQRDQGDHSGPGEAGAGPLHRGPGFAGQEVNGSE 4
GL R+ E G PE LD ++ ++G GPG+ G PG GQ+ + E
Sbjct: 307 GLVGRKGEPG----PEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGE 359
>J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV
pro-collagen protein.
Length = 1775
Score = 28.7 bits (61), Expect = 9.7
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -2
Query: 174 GLPAREVERGASSRPEAHGRLDSEQRDQGDHSGPGEAGAGPLHRGPGFAGQEVNGSE 4
GL R+ E G PE LD ++ ++G GPG+ G PG GQ+ + E
Sbjct: 307 GLVGRKGEPG----PEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGE 359
>BT029094-1|ABJ17027.1| 270|Drosophila melanogaster IP12946p
protein.
Length = 270
Score = 28.7 bits (61), Expect = 9.7
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -3
Query: 413 PKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQ 276
PK+ +D VE T N +E +TV +ED E W + GQ
Sbjct: 224 PKIEEAVDHPVEETTNWADEVAAETVGGVEDWNEDTVKTSWGSDGQ 269
>AY118899-1|AAM50759.1| 270|Drosophila melanogaster LD09376p
protein.
Length = 270
Score = 28.7 bits (61), Expect = 9.7
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -3
Query: 413 PKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQ 276
PK+ +D VE T N +E +TV +ED E W + GQ
Sbjct: 224 PKIEEAVDHPVEETTNWADEVAAETVGGVEDWNEDTVKTSWGSDGQ 269
>AY118400-1|AAM48429.1| 608|Drosophila melanogaster RE60058p
protein.
Length = 608
Score = 28.7 bits (61), Expect = 9.7
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -3
Query: 209 LMYAYTEVKRRLDYQLEKSNVERRL-AQKHMVDWIVSNVTKAITPDQEKQALDRCI 45
L Y Y++ ++R + ER L A H +D ++S + + PD D C+
Sbjct: 19 LAYKYSQFRQRRREAASRRVTERELSALHHKIDKLLSKLEEESEPDPPTSQEDECV 74
>AL031027-8|CAA19839.1| 270|Drosophila melanogaster
EG:80H7.6,FBgn0003517;sta protein.
Length = 270
Score = 28.7 bits (61), Expect = 9.7
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -3
Query: 413 PKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQ 276
PK+ +D VE T N +E +TV +ED E W + GQ
Sbjct: 224 PKIEEAVDHPVEETTNWADEVAAETVGGVEDWNEDTVKTSWGSDGQ 269
>AE014298-225|AAN09049.1| 270|Drosophila melanogaster CG14792-PB,
isoform B protein.
Length = 270
Score = 28.7 bits (61), Expect = 9.7
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -3
Query: 413 PKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQ 276
PK+ +D VE T N +E +TV +ED E W + GQ
Sbjct: 224 PKIEEAVDHPVEETTNWADEVAAETVGGVEDWNEDTVKTSWGSDGQ 269
>AE014298-224|AAF45638.2| 270|Drosophila melanogaster CG14792-PA,
isoform A protein.
Length = 270
Score = 28.7 bits (61), Expect = 9.7
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -3
Query: 413 PKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQ 276
PK+ +D VE T N +E +TV +ED E W + GQ
Sbjct: 224 PKIEEAVDHPVEETTNWADEVAAETVGGVEDWNEDTVKTSWGSDGQ 269
>AE014298-223|AAN09050.2| 313|Drosophila melanogaster CG14792-PD,
isoform D protein.
Length = 313
Score = 28.7 bits (61), Expect = 9.7
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -3
Query: 413 PKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQ 276
PK+ +D VE T N +E +TV +ED E W + GQ
Sbjct: 267 PKIEEAVDHPVEETTNWADEVAAETVGGVEDWNEDTVKTSWGSDGQ 312
>AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,
isoform C protein.
Length = 1779
Score = 28.7 bits (61), Expect = 9.7
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -2
Query: 174 GLPAREVERGASSRPEAHGRLDSEQRDQGDHSGPGEAGAGPLHRGPGFAGQEVNGSE 4
GL R+ E G PE LD ++ ++G GPG+ G PG GQ+ + E
Sbjct: 307 GLVGRKGEPG----PEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGE 359
>AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,
isoform B protein.
Length = 1779
Score = 28.7 bits (61), Expect = 9.7
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -2
Query: 174 GLPAREVERGASSRPEAHGRLDSEQRDQGDHSGPGEAGAGPLHRGPGFAGQEVNGSE 4
GL R+ E G PE LD ++ ++G GPG+ G PG GQ+ + E
Sbjct: 307 GLVGRKGEPG----PEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGE 359
>AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,
isoform A protein.
Length = 1779
Score = 28.7 bits (61), Expect = 9.7
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -2
Query: 174 GLPAREVERGASSRPEAHGRLDSEQRDQGDHSGPGEAGAGPLHRGPGFAGQEVNGSE 4
GL R+ E G PE LD ++ ++G GPG+ G PG GQ+ + E
Sbjct: 307 GLVGRKGEPG----PEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGE 359
>AE013599-2369|AAF57936.2| 608|Drosophila melanogaster CG8910-PA
protein.
Length = 608
Score = 28.7 bits (61), Expect = 9.7
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -3
Query: 209 LMYAYTEVKRRLDYQLEKSNVERRL-AQKHMVDWIVSNVTKAITPDQEKQALDRCI 45
L Y Y++ ++R + ER L A H +D ++S + + PD D C+
Sbjct: 19 LAYKYSQFRQRRREAASRRVTERELSALHHKIDKLLSKLEEESEPDPPTSQEDECV 74
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,375,807
Number of Sequences: 53049
Number of extensions: 799726
Number of successful extensions: 3640
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 3069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3616
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3695805360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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