Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14a02
(502 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292339-1|CAL23151.2| 387|Tribolium castaneum gustatory recept... 25 0.38
AM292338-1|CAL23150.2| 372|Tribolium castaneum gustatory recept... 25 0.38
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 25 0.38
EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4 prot... 25 0.50
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 23 1.5
AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5 prot... 22 2.7
AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory recept... 21 4.7
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 21 6.2
AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle nu... 21 6.2
AM292381-1|CAL23193.2| 364|Tribolium castaneum gustatory recept... 21 8.2
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 21 8.2
>AM292339-1|CAL23151.2| 387|Tribolium castaneum gustatory receptor
candidate 18 protein.
Length = 387
Score = 25.0 bits (52), Expect = 0.38
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +1
Query: 226 TLVDNHTESMSSHVVHATCLSMVYFVWHTLLNCTIASDVYNVSNFVHF 369
TLV H+ +++ S+ VW +L+ + D Y V N V F
Sbjct: 219 TLVQMHSNLVTTSEEVCDSFSIFGLVWISLIFVVLIGDAYAVLNSVLF 266
>AM292338-1|CAL23150.2| 372|Tribolium castaneum gustatory receptor
candidate 17 protein.
Length = 372
Score = 25.0 bits (52), Expect = 0.38
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +1
Query: 226 TLVDNHTESMSSHVVHATCLSMVYFVWHTLLNCTIASDVYNVSNFVHF 369
TLV H+ +++ S+ VW +L+ + D Y V N V F
Sbjct: 219 TLVQMHSNLVTTSEEVCDSFSIFGLVWISLIFVVLIGDAYAVLNSVLF 266
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 25.0 bits (52), Expect = 0.38
Identities = 14/59 (23%), Positives = 21/59 (35%)
Frame = -1
Query: 415 SQVPHTWNYSALHVHESVQSWRHCRHQRQWCSSKGYATQSIPWKDRSRVQRDCSCSRCD 239
S + T +Y+ + E + SWR + G P S V +C CD
Sbjct: 496 SHMQQTQHYTNIISQEQIISWRSSDDAKGGGGGSGSGNNQPPGGPSSHVSAVLTCKVCD 554
>EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4
protein.
Length = 475
Score = 24.6 bits (51), Expect = 0.50
Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = -1
Query: 502 LSRSVKLCNTRLED--DELQGLPPRHQGLVRSQVPHTWNYSALHVHESVQSW 353
LS+ + + N D G+ H GL S V T N L V +++ W
Sbjct: 195 LSKYLDIINVMAYDLRGSWDGVTGHHSGLYPSAVDTTTNQKLLTVDAAIRGW 246
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 23.0 bits (47), Expect = 1.5
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -2
Query: 306 PHKVYHGKTGR 274
PH Y GKTGR
Sbjct: 302 PHPTYFGKTGR 312
>AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5
protein.
Length = 533
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/19 (42%), Positives = 12/19 (63%), Gaps = 1/19 (5%)
Frame = -1
Query: 406 PHT-WNYSALHVHESVQSW 353
PH W Y L+V++ +Q W
Sbjct: 234 PHDQWAYEKLNVNDGLQLW 252
Score = 21.0 bits (42), Expect = 6.2
Identities = 9/31 (29%), Positives = 13/31 (41%)
Frame = -1
Query: 136 QRE*EATEGSQGCRQDRQPEETASSP*SCPH 44
Q E + + + C+QD P E C H
Sbjct: 466 QNEVDGSVAPKECKQDFMPHELCDKYYRCVH 496
>AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory receptor
candidate 16 protein.
Length = 452
Score = 21.4 bits (43), Expect = 4.7
Identities = 13/53 (24%), Positives = 21/53 (39%)
Frame = +1
Query: 229 LVDNHTESMSSHVVHATCLSMVYFVWHTLLNCTIASDVYNVSNFVHFHVRGER 387
LV+ H + H + S+ +W T+ + D Y V FH+ R
Sbjct: 233 LVNLHKNLVKVAKDHNSLYSLHLLLWITVTFILLVGDSYIVMYVFFFHLSDVR 285
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 21.0 bits (42), Expect = 6.2
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = -3
Query: 71 SQLPLKLPTSSVELRNPSY 15
S P LPT NP+Y
Sbjct: 78 SSTPSSLPTQRTSTSNPTY 96
>AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle
nuclear receptor protein.
Length = 407
Score = 21.0 bits (42), Expect = 6.2
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -2
Query: 213 IIPKRINIRVEHVKHSKCRQDFLKR--VKENERLLKE 109
II KR R ++ ++ KC +KR V+E + K+
Sbjct: 129 IIDKRQRNRCQYCRYQKCLNMGMKREAVQEERQRTKD 165
>AM292381-1|CAL23193.2| 364|Tribolium castaneum gustatory receptor
candidate 60 protein.
Length = 364
Score = 20.6 bits (41), Expect = 8.2
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +2
Query: 260 VTLYTRPVFPWYTLCGIP 313
V L + WYT+C +P
Sbjct: 9 VNLGLNGLIDWYTVCLVP 26
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 20.6 bits (41), Expect = 8.2
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -1
Query: 115 EGSQGCRQDRQPEETASSP 59
+G G Q PE ++S+P
Sbjct: 413 DGGSGQNQPESPESSSSTP 431
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,622
Number of Sequences: 336
Number of extensions: 2366
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -