Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13p24
(690 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0503 - 3751028-3751063,3751145-3751231,3751333-3751410,375... 203 9e-53
09_04_0686 + 19457832-19457870,19458021-19458107,19459311-194593... 122 4e-28
03_05_0477 + 24707460-24707553,24707644-24707711,24707857-247079... 103 2e-22
08_02_1399 + 26771106-26771171,26772004-26772111,26772218-267722... 101 4e-22
12_02_1121 + 26233881-26234000,26234138-26234175,26235840-26236812 100 9e-22
05_04_0284 - 19813179-19813340,19813464-19813748,19813850-198141... 36 0.030
03_05_0521 + 25160245-25160883 36 0.040
07_01_0646 + 4853546-4853623,4853732-4855357,4855467-4855751,485... 34 0.12
01_06_0084 + 26286463-26288259 32 0.49
01_06_0197 + 27416724-27417119 31 0.65
10_08_0239 - 16099673-16100251 31 0.86
04_03_0098 + 11183039-11183752 30 1.5
03_04_0017 - 16468486-16468505,16468597-16468807,16469522-164702... 30 2.0
02_01_0214 + 1420112-1420402 30 2.0
12_01_0874 + 8384332-8384657,8385447-8386044 29 2.6
12_01_0731 - 6516894-6517473,6517485-6519574 29 2.6
07_01_0479 + 3606663-3607448 29 2.6
07_03_1148 - 24363952-24365086,24365178-24365361,24365438-243654... 29 3.5
07_03_1115 - 24076506-24076677,24077169-24077266,24077622-240777... 29 3.5
07_01_0866 - 7195305-7195756,7197171-7197447 29 3.5
05_01_0351 + 2750253-2751042,2751951-2751958,2752122-2752149,275... 29 3.5
03_02_0760 + 10960381-10960461,10960740-10961003,10961334-109616... 29 3.5
02_01_0216 + 1427490-1427789 29 3.5
01_06_1164 - 35026345-35026954,35027853-35027939,35028120-350284... 29 3.5
11_06_0557 - 24955837-24956214,24957225-24957395,24957576-249576... 29 4.6
11_01_0236 + 1811822-1812971,1814930-1814979,1815676-1816116,181... 29 4.6
10_08_0668 + 19737875-19738073,19738157-19738304,19738315-197384... 29 4.6
09_04_0179 - 15366119-15366916 29 4.6
08_01_1066 - 10887509-10888171,10888782-10888964,10889234-10889497 29 4.6
01_04_0103 + 16046012-16046018,16046214-16046366,16046908-160471... 29 4.6
12_02_0306 + 17307166-17309091 28 6.1
09_04_0165 + 15274448-15277336 28 6.1
09_03_0031 + 11735431-11735728,11736704-11737041,11737150-117372... 28 6.1
08_02_0755 - 20814074-20814268,20814909-20814965,20815047-208151... 28 6.1
06_03_0366 - 19928681-19928944 28 6.1
05_07_0267 + 28818396-28818513,28819292-28819697,28819796-288199... 28 6.1
03_02_0330 + 7502593-7504956,7505020-7506312,7522011-7522235 28 6.1
12_02_0897 + 24105498-24106109 28 8.0
12_02_0674 - 21745321-21746223,21746229-21747608 28 8.0
11_06_0291 + 22008412-22012284 28 8.0
09_02_0456 - 9525067-9525422,9525679-9528226 28 8.0
08_02_0391 - 16612929-16613867 28 8.0
08_01_0180 - 1524302-1524877,1525998-1527056 28 8.0
07_03_0508 - 18892193-18893119,18893183-18894528,18894594-18895206 28 8.0
06_03_1037 - 27058002-27058082,27058856-27059041,27060033-270601... 28 8.0
02_05_0240 - 27110752-27111180 28 8.0
02_04_0221 - 21021886-21022144,21022227-21022345,21022681-210229... 28 8.0
01_06_0670 + 31069976-31070073,31070461-31070581,31070669-310707... 28 8.0
01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308... 28 8.0
>07_01_0503 -
3751028-3751063,3751145-3751231,3751333-3751410,
3751488-3751583,3752124-3752210,3752289-3752357,
3752511-3752600,3752601-3752720,3752907-3753004,
3753084-3753193,3753463-3753533,3753679-3753714,
3753862-3753973,3754495-3754700
Length = 431
Score = 203 bits (496), Expect = 9e-53
Identities = 95/160 (59%), Positives = 122/160 (76%), Gaps = 1/160 (0%)
Frame = -1
Query: 549 AKGLLLACIRERDPCVFLEPKILYRSAAEEVPVEDYTLPLGKAQTLRVGAAATLVGWGTQ 370
AKGLLLA IR+ +P VF EPK LYR A EEVP EDY LPL +A+ +R G+ TL+GWG Q
Sbjct: 261 AKGLLLASIRDPNPVVFFEPKWLYRLAVEEVPEEDYMLPLSEAEVIRKGSDITLIGWGAQ 320
Query: 369 VHVLLEVA-DMARDKLGVTCDVIDLQSILPWDEETVCNSVKKTGRCLISHEAPLTSGFGA 193
+ VL E D A+D G++C++IDL++++PWD+ETV SV KTG+ L+SHEAP+T GFGA
Sbjct: 321 LAVLEEACEDAAKD--GISCELIDLRTLIPWDKETVEASVSKTGKLLVSHEAPITGGFGA 378
Query: 192 ELAATVQEECFLHLEAPIARVTGWDAPFPHVFEPFYLPDK 73
E+AA++ E CF LEAP+ARV G D PFP V+E FY+P K
Sbjct: 379 EIAASITERCFQRLEAPVARVCGLDTPFPLVYETFYMPTK 418
Score = 57.2 bits (132), Expect = 1e-08
Identities = 23/33 (69%), Positives = 27/33 (81%)
Frame = -1
Query: 690 EYDSGALTVRAPCSAVGHGGLYHSQSPEAFFAH 592
E++ G LT+R+P AVGHGG YHSQSPEAFF H
Sbjct: 174 EFNCGGLTIRSPYGAVGHGGHYHSQSPEAFFCH 206
>09_04_0686 +
19457832-19457870,19458021-19458107,19459311-19459391,
19459463-19459489,19459589-19459651,19459768-19459854,
19460290-19460415,19460827-19460960,19461037-19461109,
19461307-19461372,19461778-19461816,19461927-19462051,
19462131-19462245,19463109-19463141,19463525-19463593
Length = 387
Score = 122 bits (293), Expect = 4e-28
Identities = 71/193 (36%), Positives = 103/193 (53%), Gaps = 3/193 (1%)
Frame = -1
Query: 672 LTVRAPCSAVGHGGLYHSQSPEAFFAHXXXXXXXXXXXPIAAKGLLLACIRERDPCVFLE 493
+ R P A G HSQ A++AH A+GLL A IR+ DP VFLE
Sbjct: 152 IVFRGPNGAAAGVGAQHSQCYAAWYAHVPGLKVLVPYSAEDARGLLKAAIRDPDPVVFLE 211
Query: 492 PKILYRSA---AEEVPVEDYTLPLGKAQTLRVGAAATLVGWGTQVHVLLEVADMARDKLG 322
++LY + + EV + LP+GKA+ R G T+ + V L+ AD+ K G
Sbjct: 212 NELLYGESFPISAEVLDSSFALPIGKAKIEREGKDVTITAYSKMVGYALQAADIL-SKEG 270
Query: 321 VTCDVIDLQSILPWDEETVCNSVKKTGRCLISHEAPLTSGFGAELAATVQEECFLHLEAP 142
++ +VI+L+SI P D T+ SV+KT R + E+ G GAE+ +V EE F +L+AP
Sbjct: 271 ISAEVINLRSIRPLDRATINASVRKTNRLVTIEESFPQHGIGAEICMSVVEESFEYLDAP 330
Query: 141 IARVTGWDAPFPH 103
+ R+ G D P P+
Sbjct: 331 VERIAGADVPMPY 343
>03_05_0477 +
24707460-24707553,24707644-24707711,24707857-24707903,
24709188-24710160
Length = 393
Score = 103 bits (246), Expect = 2e-22
Identities = 62/190 (32%), Positives = 100/190 (52%)
Frame = -1
Query: 672 LTVRAPCSAVGHGGLYHSQSPEAFFAHXXXXXXXXXXXPIAAKGLLLACIRERDPCVFLE 493
+ +R P G HSQ E++F P AKGL+ A IR +P V E
Sbjct: 182 IVIRGPGGVGRQLGAEHSQRLESYFQSIPGLQMVACSTPYNAKGLMKAAIRSENPVVLFE 241
Query: 492 PKILYRSAAEEVPVEDYTLPLGKAQTLRVGAAATLVGWGTQVHVLLEVADMARDKLGVTC 313
+LY + E++P E+Y L L +A+ +R G T++ + + +++ A +K G
Sbjct: 242 HVLLY-NLKEKIPDEEYVLCLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNK-GYDP 299
Query: 312 DVIDLQSILPWDEETVCNSVKKTGRCLISHEAPLTSGFGAELAATVQEECFLHLEAPIAR 133
+VID++S+ P+D T+ NS+KKT R LI E T G GA L + + + + +L+API
Sbjct: 300 EVIDIRSLKPFDLHTIGNSIKKTHRVLIVEECMRTGGIGASLRSAIIDNFWDYLDAPIMC 359
Query: 132 VTGWDAPFPH 103
++ D P P+
Sbjct: 360 LSSQDVPTPY 369
>08_02_1399 +
26771106-26771171,26772004-26772111,26772218-26772280,
26772382-26772468,26772931-26773056,26773418-26773551,
26773627-26773699,26773819-26773884,26774358-26774391,
26774904-26774953,26775067-26775191,26775278-26775392,
26775617-26775685
Length = 371
Score = 101 bits (243), Expect = 4e-22
Identities = 69/207 (33%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Frame = -1
Query: 672 LTVRAPCSAVGHGGLYHSQSPEAFFAHXXXXXXXXXXXPIAAKGLLLACIRERDPCVFLE 493
+ R P A G HSQ A++AH A+GLL A IR+ DP VFLE
Sbjct: 132 IVFRGPNGAAAGVGAQHSQCYAAWYAHVPGLKVLTPYSAEDARGLLKAAIRDPDPVVFLE 191
Query: 492 PKILYRSA---AEEVPVEDYTLPLGKAQTLRVGAAATLVGWGTQV-HVLLEVAD---MAR 334
++LY + + EV + LP+GKA+ + G T+ + V + L +V + +
Sbjct: 192 NELLYGESFPVSAEVLDSSFCLPIGKAKIEQEGKDVTITAFSKMVGYALQDVREPQMKEK 251
Query: 333 D----------KLGVTCDVIDLQSILPWDEETVCNSVKKTGRCLISHEAPLTSGFGAELA 184
D K G++ +VI+L+SI P D T+ SV+KT R + E G GAE+
Sbjct: 252 DVKFQAAEILSKEGISAEVINLRSIRPLDRATINASVRKTNRLVTLEEGFPQHGVGAEIC 311
Query: 183 ATVQEECFLHLEAPIARVTGWDAPFPH 103
+V E+ F +L+AP+ R+ G D P P+
Sbjct: 312 MSVVEDSFEYLDAPVERIAGADVPMPY 338
>12_02_1121 + 26233881-26234000,26234138-26234175,26235840-26236812
Length = 376
Score = 100 bits (240), Expect = 9e-22
Identities = 61/190 (32%), Positives = 99/190 (52%)
Frame = -1
Query: 672 LTVRAPCSAVGHGGLYHSQSPEAFFAHXXXXXXXXXXXPIAAKGLLLACIRERDPCVFLE 493
+ +R P G HSQ E++F P AKGL+ A IR +P V E
Sbjct: 165 IVIRGPGGVGRQLGAEHSQRLESYFQSIPGLQMVACSTPYNAKGLMKAAIRSENPVVLFE 224
Query: 492 PKILYRSAAEEVPVEDYTLPLGKAQTLRVGAAATLVGWGTQVHVLLEVADMARDKLGVTC 313
+LY + E++P E+Y L +A+ +R G T++ + + +++ A +K G
Sbjct: 225 HVLLY-NLKEKIPDEEYICCLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNK-GYDP 282
Query: 312 DVIDLQSILPWDEETVCNSVKKTGRCLISHEAPLTSGFGAELAATVQEECFLHLEAPIAR 133
+VID++S+ P+D T+ NS+KKT R LI E T G GA L + + + + +L+API
Sbjct: 283 EVIDIRSLKPFDLHTIGNSIKKTHRVLIVEECMRTGGIGASLRSAIIDNFWDYLDAPIMC 342
Query: 132 VTGWDAPFPH 103
++ D P P+
Sbjct: 343 LSSQDVPTPY 352
>05_04_0284 -
19813179-19813340,19813464-19813748,19813850-19814131,
19814224-19814531,19814654-19814927,19815807-19816175,
19816372-19816434,19817495-19817789,19817818-19818008,
19818123-19818428,19818516-19818638
Length = 885
Score = 35.9 bits (79), Expect = 0.030
Identities = 23/85 (27%), Positives = 41/85 (48%)
Frame = -1
Query: 438 LPLGKAQTLRVGAAATLVGWGTQVHVLLEVADMARDKLGVTCDVIDLQSILPWDEETVCN 259
L +GK + L G L+G+G+ V L A + ++ G+ V D + P D +T+
Sbjct: 736 LEVGKGRVLLEGERVALLGYGSAVQYCLAAASLV-ERHGLKVTVADARFCKPLD-QTLIR 793
Query: 258 SVKKTGRCLISHEAPLTSGFGAELA 184
+ + L++ E GFG+ +A
Sbjct: 794 RLASSHEVLLTVEEGSIGGFGSHVA 818
>03_05_0521 + 25160245-25160883
Length = 212
Score = 35.5 bits (78), Expect = 0.040
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = -3
Query: 646 GRARRTLPLPKSGGLLCTCS---RSPGGGAS-RAHSGQGSAAGLHPREGPVRVPGTEDTV 479
GR RR LP P+ G + R GGG+ + G G A L P EG V G +
Sbjct: 111 GRERRRLPEPEEGATTVAGAWEGRGNGGGSRIQGMGGGGGGASLEPEEGAAAVAGAREEG 170
Query: 478 QVGSRRST 455
+G + S+
Sbjct: 171 VLGRQWSS 178
>07_01_0646 +
4853546-4853623,4853732-4855357,4855467-4855751,
4856131-4856277
Length = 711
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/85 (25%), Positives = 39/85 (45%)
Frame = -1
Query: 438 LPLGKAQTLRVGAAATLVGWGTQVHVLLEVADMARDKLGVTCDVIDLQSILPWDEETVCN 259
L +GK + L G L+G+GT V ++ A+ ++ G+ V D + P D +
Sbjct: 567 LEVGKGRVLVGGNRVALLGYGTMVQACMKAAEALKEH-GIYVTVADARFCKPLDTGLI-R 624
Query: 258 SVKKTGRCLISHEAPLTSGFGAELA 184
+ L++ E GFG+ +A
Sbjct: 625 ELAAEHEVLVTVEEGSIGGFGSHVA 649
>01_06_0084 + 26286463-26288259
Length = 598
Score = 31.9 bits (69), Expect = 0.49
Identities = 21/41 (51%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -1
Query: 483 LYRSAAEE-VPVEDYTLPLGKAQTLRVGAAATLVGWGTQVH 364
++R A EE VPV D+T+ LRV AAATL G QVH
Sbjct: 214 IFRLALEEAVPVNDFTVSC----ILRVCAAATLFELGAQVH 250
>01_06_0197 + 27416724-27417119
Length = 131
Score = 31.5 bits (68), Expect = 0.65
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -3
Query: 685 RQRRPHGPRAXQCGRARRT-LPLPKSGGLLCTCSRSPGGGASRAHSGQGSAA 533
R+R+ G R CG T + L +GG + S PGGG R H G G A
Sbjct: 73 RRRQRRGTRGDGCGSGWTTSMGLRLAGGEVAVGSSGPGGGG-RWHGGLGRLA 123
>10_08_0239 - 16099673-16100251
Length = 192
Score = 31.1 bits (67), Expect = 0.86
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = -3
Query: 562 RAHSGQGSAAGLHPREGPVRVPGTEDTVQVGSRRSTRRGLHATAGKG 422
R S QGS G G V G + + GS S R G HA+ G G
Sbjct: 27 RYSSSQGSGTGSGQGGGYVNGGGAGEGIGAGSGSSNRYGAHASGGGG 73
>04_03_0098 + 11183039-11183752
Length = 237
Score = 30.3 bits (65), Expect = 1.5
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = -3
Query: 640 ARRTLPLPKSGGLLCTCSR-SPGGGASRAHSGQGSAAGLHPREGPVRVPGTEDTV----Q 476
A RT P KSGG + + S+ S + A SG GS +G H V G++ T+
Sbjct: 33 AARTFPDDKSGGAVVSGSKFSLPFPSKAAGSGSGSGSG-HGFGWMVSHNGSDTTIGFGGG 91
Query: 475 VGSRRSTRRGLHATAGKGADV 413
VG T RG ++AG G V
Sbjct: 92 VGGGVGTSRGGGSSAGGGVGV 112
>03_04_0017 -
16468486-16468505,16468597-16468807,16469522-16470214,
16470338-16470398,16470624-16470706
Length = 355
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/68 (29%), Positives = 25/68 (36%)
Frame = -3
Query: 649 CGRARRTLPLPKSGGLLCTCSRSPGGGASRAHSGQGSAAGLHPREGPVRVPGTEDTVQVG 470
CG LP L C S A R H G G+A GL P + + V
Sbjct: 174 CGGGGADSGLPLDMFLNCPSSLEVDRRAQRDHGGGGAAVGLSPGTKMILTKAKDILVDGN 233
Query: 469 SRRSTRRG 446
+R +T G
Sbjct: 234 TRNTTTSG 241
>02_01_0214 + 1420112-1420402
Length = 96
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = -3
Query: 577 GGGASRAHSGQGSAAGLHPREGPVRVPGTEDTVQVGSRRSTRRGLHATAGKGA 419
GG + AH G G+ AG G G + + VG+ + G AG GA
Sbjct: 20 GGAGASAHVGVGAGAGADAGVGAAVGAGADAALGVGANAAGAAGAGVGAGIGA 72
>12_01_0874 + 8384332-8384657,8385447-8386044
Length = 307
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 170 SCTVAASSAPNPDVSGASWDIKHR-PVFFTELHTVSSSQGRID 295
SC A+SAP + W + HR P+ + H S + G +D
Sbjct: 71 SCCYKAASAPEDSATKPPWAMPHRVPINDSTSHASSHNDGSVD 113
>12_01_0731 - 6516894-6517473,6517485-6519574
Length = 889
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 432 AVACNPRRVLLRLPTCTVSSVP 497
+V C P +LLRL +C++SS P
Sbjct: 501 SVVCYPNIILLRLASCSISSFP 522
>07_01_0479 + 3606663-3607448
Length = 261
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +3
Query: 495 PGTRTGPSRGCRPAADPWPLWAREAPPPGDREHVQRRPP 611
PG GP G RP P P PPP + + PP
Sbjct: 222 PGMPGGPPPGMRPGMPPPPFRPGMPPPPPGPQQPGQNPP 260
>07_03_1148 -
24363952-24365086,24365178-24365361,24365438-24365474,
24365585-24365818
Length = 529
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 532 GLHPREGPVRVPGTEDTVQVGS--RRSTRRGLHATAGKGADVKSWRRGH 392
GL+ +G + G +DT+ G R+ + TAGKG V+SW G+
Sbjct: 158 GLNALKGRRKAAGGKDTLYSGDWDARNALDLMRYTAGKGYRVESWELGN 206
>07_03_1115 -
24076506-24076677,24077169-24077266,24077622-24077743,
24079059-24079235,24079809-24079897,24079919-24079965,
24080423-24080519,24080600-24080682,24080716-24080796,
24081043-24081199,24081323-24081750,24081985-24082014,
24083180-24083300,24083432-24083697
Length = 655
Score = 29.1 bits (62), Expect = 3.5
Identities = 24/93 (25%), Positives = 35/93 (37%), Gaps = 1/93 (1%)
Frame = -1
Query: 684 DSGALTVRAPCSAVGHGGLYHSQSPEAFFAHXXXXXXXXXXXPIAAK-GLLLACIRERDP 508
DSG+ PC+ G + S+SP AH K + C ER
Sbjct: 109 DSGSTVTYVPCATCEQCGNHQSESPNIIEAHDPRFQPDLSSTYSPVKCNVDCTCDNERSQ 168
Query: 507 CVFLEPKILYRSAAEEVPVEDYTLPLGKAQTLR 409
C + E + S++ V ED + GK L+
Sbjct: 169 CTY-ERQYAEMSSSSGVLGED-IMSFGKESELK 199
>07_01_0866 - 7195305-7195756,7197171-7197447
Length = 242
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +3
Query: 507 TGPSRGCRPAADPWPLWAREAPPPGDREHVQRRPPDFGSGRVRRA 641
TG R + + DP PL + P +RE +RR P G G R A
Sbjct: 2 TGSVREGKRSPDP-PLLSPPTADPRERETKRRRDPGVGGGSARAA 45
>05_01_0351 +
2750253-2751042,2751951-2751958,2752122-2752149,
2754692-2754775,2755780-2757548
Length = 892
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 220 LVGYQAPPSFLHGIAHGLLVPGQDRLQIDDVTGDAEL-VPG 339
L G PPS+ H A G++ PGQ + Q D +L +PG
Sbjct: 800 LPGPPLPPSYQHRAAGGVVFPGQHQQQPYRPNNDTQLGLPG 840
>03_02_0760 +
10960381-10960461,10960740-10961003,10961334-10961619,
10961637-10962394
Length = 462
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -3
Query: 613 SGGLLCTCSRSPGGGASRAHSGQGSAAGLHPREGPVRVPGT 491
+GG + PG RA S G+A L P +G +PGT
Sbjct: 319 AGGGATGAAAVPGSACVRAASPGGTATFLEPTDGAAVLPGT 359
>02_01_0216 + 1427490-1427789
Length = 99
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = -3
Query: 577 GGGASRAHSGQGSAAGLHPREGPVRVPGTEDTVQVGSRRSTRRGLHATAGKGA 419
GG + AH G G+ AG G G + + VG+ + G AG GA
Sbjct: 23 GGAGASAHVGVGAGAGADAGVGAAVGAGADAALGVGAGAAGAAGAGVGAGIGA 75
>01_06_1164 -
35026345-35026954,35027853-35027939,35028120-35028493,
35037372-35038586,35038659-35039316,35039331-35041012
Length = 1541
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
Frame = -3
Query: 616 KSGGLLCTCSRSPGGGASRAHSGQGSAAGLHPREGPVRVPGTEDTVQVGS--------RR 461
+S T + + G +SR + + +A P +P T++ V+ G RR
Sbjct: 125 RSSATKATGAATAGSVSSRRRARRAAAVARRSSAIPSSMPPTQEDVREGPDARLNIERRR 184
Query: 460 STRRGLHATAGKGADVKSWRRGH 392
+ RR HA+ G + R GH
Sbjct: 185 NDRRAAHASEGASSSGAPLRSGH 207
>11_06_0557 -
24955837-24956214,24957225-24957395,24957576-24957635,
24958419-24958623,24958710-24958953,24959103-24959394,
24959734-24960828,24960915-24961409,24961665-24961823,
24961893-24962387
Length = 1197
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -3
Query: 583 SPGGGASRAHSGQGSAAGLHPREGPVRVPGTEDTVQVGSRR 461
+PGG A+ G AA + P R P T +TV GS R
Sbjct: 86 APGGAATAQREGAPPAAATSVQGAP-RAPATAETVPQGSPR 125
>11_01_0236 + 1811822-1812971,1814930-1814979,1815676-1816116,
1816199-1816309,1816934-1817074,1817153-1817323,
1817421-1817625,1817714-1817886,1817997-1818079,
1818487-1818626,1818806-1818891,1818957-1819142,
1819172-1819365,1820387-1820736,1821153-1821235
Length = 1187
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -3
Query: 649 CGRARRTLPLPKSGGLLCTCSRSPGGGASRAHSGQ 545
C R LPLPK C + S GG AS G+
Sbjct: 953 CSRLETRLPLPKLNTSCCLVTLSRGGRASNLSRGR 987
>10_08_0668 +
19737875-19738073,19738157-19738304,19738315-19738453,
19738521-19738664,19739502-19739561,19740058-19740190,
19740669-19740865
Length = 339
Score = 28.7 bits (61), Expect = 4.6
Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Frame = +3
Query: 408 LLTSAPFPAVACNPRRVLLRLPT-----CTVSSVPGTRTGPSRGCRPAADPWPLWAREAP 572
LL+ +P PA LL L C ++ V GTR P R +A P RE P
Sbjct: 93 LLSPSPTPAQLVGTLVFLLHLQLWLDGLCEIAEVGGTRAVPGRVLGDSAVP-----REVP 147
Query: 573 PPGDREHVQRRPPDFGSGRVRR 638
G+R+ + G+G R
Sbjct: 148 RGGERDGALMVFDEMGAGAAER 169
>09_04_0179 - 15366119-15366916
Length = 265
Score = 28.7 bits (61), Expect = 4.6
Identities = 22/78 (28%), Positives = 30/78 (38%)
Frame = -3
Query: 652 QCGRARRTLPLPKSGGLLCTCSRSPGGGASRAHSGQGSAAGLHPREGPVRVPGTEDTVQV 473
Q R ++ L GG+ S G G SG GS +G G G+
Sbjct: 24 QISRKDLSIDLGGGGGIGIGTGISIGIGGGAGGSGSGSGSGSGSFSGSGSSSGSGSASGS 83
Query: 472 GSRRSTRRGLHATAGKGA 419
GSR S + ++AG A
Sbjct: 84 GSRSSAGSSVGSSAGSSA 101
>08_01_1066 - 10887509-10888171,10888782-10888964,10889234-10889497
Length = 369
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +3
Query: 513 PSRGCRPA-ADPWPLWAREAPPPGDREHVQRRP 608
P GC PA A W L + PPP R H+ P
Sbjct: 304 PVAGCSPAEAVLWALLNQGPPPPSMRNHINLLP 336
>01_04_0103 +
16046012-16046018,16046214-16046366,16046908-16047158,
16047509-16047631,16047818-16047931,16048153-16048315,
16048867-16049462
Length = 468
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -2
Query: 341 WPGTSSASPVTSSICSRSCPGTR 273
WP P TSS+ SCP TR
Sbjct: 131 WPAPIGLEPTTSSLGPTSCPATR 153
>12_02_0306 + 17307166-17309091
Length = 641
Score = 28.3 bits (60), Expect = 6.1
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = -3
Query: 610 GGLLCTCSRSPGGGASRAHSGQGSAAGLH--PREGPVRVPGTEDTVQVGSRRSTRRG 446
GG++C S GGGA R G AG +E VR+ T + + +G+ +TRRG
Sbjct: 567 GGIVCGGGGSGGGGA-RGGFLLGGVAGCWALAKEESVRIT-TANRMALGTAMATRRG 621
>09_04_0165 + 15274448-15277336
Length = 962
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -3
Query: 583 SPGGGASRAHSGQGSAAGLHPREGPVRVPGTEDTVQVGSRRSTRRGLHATAG 428
+PGGGA A G +AAG + GP + + + + + + R HA AG
Sbjct: 8 TPGGGAPEARRGSLAAAGSAVQHGPDLIGFSSWVLPISAGYAVDR-RHAAAG 58
>09_03_0031 +
11735431-11735728,11736704-11737041,11737150-11737285,
11737477-11737613,11737701-11737824,11738859-11739364
Length = 512
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -3
Query: 592 CSRSPGGGASRAHSGQGSAAGLHPREGPVRVPGTED-TVQVG 470
C RS SR+ SG GS+ PR+G G ED TV G
Sbjct: 28 CRRSRSRSGSRSGSGSGSSRRRLPRKGSGGGGGGEDATVATG 69
>08_02_0755 -
20814074-20814268,20814909-20814965,20815047-20815157,
20815291-20815344,20815731-20815943,20816655-20816773,
20816880-20816940,20817037-20817147,20817239-20817383,
20817477-20817523
Length = 370
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -3
Query: 550 GQGSAAGLHPREGPVRVPGTEDTVQVGSRRSTRRGLHATA-GKGADVKSWRRG 395
GQ PR P+RV G D V G H+TA K +V +W RG
Sbjct: 208 GQLGTGDTQPRSQPIRVEGLSDLSLVDIAAG---GWHSTALTKEGEVYAWGRG 257
>06_03_0366 - 19928681-19928944
Length = 87
Score = 28.3 bits (60), Expect = 6.1
Identities = 21/71 (29%), Positives = 27/71 (38%)
Frame = -3
Query: 616 KSGGLLCTCSRSPGGGASRAHSGQGSAAGLHPREGPVRVPGTEDTVQVGSRRSTRRGLHA 437
+ GG C + GGGA G G R G E + G + RG A
Sbjct: 10 QGGGRRCRINPMRGGGAEEIGEGGGD-----------RGSGEEADGRGGGDAAAGRGGDA 58
Query: 436 TAGKGADVKSW 404
AG+G D +W
Sbjct: 59 AAGRGGDAAAW 69
>05_07_0267 +
28818396-28818513,28819292-28819697,28819796-28819973,
28820414-28820553,28820629-28821874,28821952-28822052,
28822170-28822314,28822755-28822823,28822910-28822955,
28823049-28823422,28823622-28823701,28823813-28823948,
28824199-28824358,28824582-28824664,28825417-28825545
Length = 1136
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/42 (42%), Positives = 20/42 (47%)
Frame = +2
Query: 140 IGASKCRKHSSCTVAASSAPNPDVSGASWDIKHRPVFFTELH 265
+GAS K S A S D +G SW IK R F ELH
Sbjct: 698 VGASIV-KSGSGMFAVYSVSVTDANGNSWSIKRRFRHFEELH 738
>03_02_0330 + 7502593-7504956,7505020-7506312,7522011-7522235
Length = 1293
Score = 28.3 bits (60), Expect = 6.1
Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 8/83 (9%)
Frame = -3
Query: 616 KSGGLLCTCSRSPGGGASRAHSGQGSAAGLHPREGPVRVPGTEDTVQVGS--------RR 461
+S T + + G +SR + + +A P P T++ V+ G RR
Sbjct: 125 RSSATKATGAATAGSVSSRRRAWRAAAVTRRSSAIPSSTPPTQENVREGPDARLNIERRR 184
Query: 460 STRRGLHATAGKGADVKSWRRGH 392
+ RR HA+ G + R GH
Sbjct: 185 NDRRAAHASEGASSSGAPLRSGH 207
>12_02_0897 + 24105498-24106109
Length = 203
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 490 EDTVQVGSRRST-RRGLHATAGKGADVKSWR 401
E T + +RRST RR A G G+++ WR
Sbjct: 162 EVTAEAAARRSTGRRRWRAAIGNGSEISVWR 192
>12_02_0674 - 21745321-21746223,21746229-21747608
Length = 760
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2
Query: 344 TWPGTSSASPVTSSICSRSCPG 279
T PGTS S TS I S SC G
Sbjct: 654 TAPGTSELSTTTSKISSTSCAG 675
>11_06_0291 + 22008412-22012284
Length = 1290
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/51 (23%), Positives = 26/51 (50%)
Frame = +1
Query: 232 QAPPSFLHGIAHGLLVPGQDRLQIDDVTGDAELVPGHVCYLQQHVNLRPPA 384
+ PP + ++ ++ P D ++ D+ D +VPG+ Y + + + PA
Sbjct: 194 EIPPDAIETLSIAIVAPDTDNKEVLDLARDTLVVPGN--YYHRSITVNVPA 242
>09_02_0456 - 9525067-9525422,9525679-9528226
Length = 967
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 85 VERFEDMREGRVPAGHSSYRRLQVQKTFLLHGGGEL 192
+E F + GR+PAG ++LQ + H GE+
Sbjct: 255 IELFSNQLSGRIPAGLGGLKKLQQLDISMNHISGEI 290
>08_02_0391 - 16612929-16613867
Length = 312
Score = 27.9 bits (59), Expect = 8.0
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 11/76 (14%)
Frame = +3
Query: 417 SAPFPAVACNPRRVLLRLP-----------TCTVSSVPGTRTGPSRGCRPAADPWPLWAR 563
S+P A+A +P RV ++LP T T ++V T T S A+ P ++
Sbjct: 173 SSPAVAIAPSPARVKIQLPAPRRASGRRKKTQTTATVTTTTTTESLSQVTASSASPS-SK 231
Query: 564 EAPPPGDREHVQRRPP 611
EAPPP PP
Sbjct: 232 EAPPPSSSASAATPPP 247
>08_01_0180 - 1524302-1524877,1525998-1527056
Length = 544
Score = 27.9 bits (59), Expect = 8.0
Identities = 23/65 (35%), Positives = 26/65 (40%), Gaps = 7/65 (10%)
Frame = -3
Query: 595 TCSRS---PGGGASRAHSGQGSAAGLHPREGPVRVPGTED----TVQVGSRRSTRRGLHA 437
TC+R PGGG R Q HPR P VP ED +V VG S +
Sbjct: 269 TCTRMGPLPGGGEYRVEYNQMFVLRYHPRRRPCWVP-VEDLGGRSVFVGKNNSVALRVDG 327
Query: 436 TAGKG 422
G G
Sbjct: 328 GGGGG 332
>07_03_0508 - 18892193-18893119,18893183-18894528,18894594-18895206
Length = 961
Score = 27.9 bits (59), Expect = 8.0
Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 8/83 (9%)
Frame = -3
Query: 616 KSGGLLCTCSRSPGGGASRAHSGQGSAAGLHPREGPVRVPGTEDTVQVGS--------RR 461
+S T + G +SR + + +AA P P T++ V+ G RR
Sbjct: 12 RSSATKATGVATAGSVSSRRRARRAAAATRRSSAIPSSTPPTQEDVRRGPDARFNIERRR 71
Query: 460 STRRGLHATAGKGADVKSWRRGH 392
+ RR HA+ G + R GH
Sbjct: 72 NDRRAAHASEGASSSGAPLRSGH 94
>06_03_1037 -
27058002-27058082,27058856-27059041,27060033-27060176,
27060284-27061183
Length = 436
Score = 27.9 bits (59), Expect = 8.0
Identities = 19/50 (38%), Positives = 22/50 (44%)
Frame = -3
Query: 640 ARRTLPLPKSGGLLCTCSRSPGGGASRAHSGQGSAAGLHPREGPVRVPGT 491
ARR LP S + GGGA G+G GL P P R PG+
Sbjct: 11 ARRHAHLPTSYSAAFSSFSGIGGGA-----GRGRGRGLPPSATPPRAPGS 55
>02_05_0240 - 27110752-27111180
Length = 142
Score = 27.9 bits (59), Expect = 8.0
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = -3
Query: 577 GGGASRAHSGQGSAAGLHPRE---GPVRVPGTEDTVQVGSRRSTRRGLHATAGKGADVKS 407
GGG + A + +AAG R+ G PG E +Q RRS RR A A+
Sbjct: 71 GGGGAVAAAAAVTAAGERHRQRAAGGAGGPGAEQRLQSLRRRSMRRAAEAARRMQAN-GE 129
Query: 406 WRRG 395
W G
Sbjct: 130 WEPG 133
>02_04_0221 -
21021886-21022144,21022227-21022345,21022681-21022920,
21023064-21023171,21023272-21023331,21023991-21024066,
21024155-21024360,21024722-21024784,21024925-21025012,
21025515-21026015,21027206-21027603
Length = 705
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +2
Query: 263 HTVSSSQGRIDCRSMTSQVTPSLSRAMSAXXXXXXXCVPQPTSVAAAPTLNVCAFP 430
H SSS + +M+ V+P S + C+P PT A +P L+ A+P
Sbjct: 616 HNTSSSPTAVRA-NMSLPVSPC-SSPLRQFKQSNWSCLPSPTHPALSPGLSAAAYP 669
>01_06_0670 +
31069976-31070073,31070461-31070581,31070669-31070743,
31070863-31071014,31071171-31071276,31071409-31071474,
31071562-31071657,31071764-31071835,31071925-31072008,
31072147-31072245,31072721-31072768,31072857-31072910,
31072991-31073089,31073182-31073271,31073371-31073448,
31073584-31073658,31073806-31073896,31074014-31074142,
31074235-31074323
Length = 573
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +1
Query: 286 QDRLQIDDVTGDAELVPGHVCYLQQHVNLRPPAHQRG 396
+D D T D + P VC H LR P H +G
Sbjct: 10 EDAYGEDRATEDQPITPWAVCVASGHSLLRDPRHNKG 46
>01_01_0409 -
3084821-3084988,3085069-3085155,3085270-3085476,
3085904-3085985,3086085-3086275,3086410-3086616,
3086709-3086871,3087905-3087960,3088035-3088148,
3088599-3089807
Length = 827
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 548 PRVCCWPASARGTRACSWNRRYCTGRQPKK 459
P C+ S R TR CS R C+G+ K+
Sbjct: 230 PNAMCFCGSHRETRRCSHQRYSCSGKCNKR 259
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,444,634
Number of Sequences: 37544
Number of extensions: 494579
Number of successful extensions: 2574
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 2363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2551
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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