Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13p24
(690 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 27 0.74
AJ441131-3|CAD29632.1| 568|Anopheles gambiae putative apyrase/n... 25 1.7
AJ439398-2|CAD28125.1| 568|Anopheles gambiae putative 5' nucleo... 25 1.7
AY578807-1|AAT07312.1| 438|Anopheles gambiae punt protein. 25 3.0
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 25 3.0
EF592176-1|ABQ95972.2| 661|Anopheles gambiae laccase-3 protein. 24 3.9
DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protei... 24 3.9
DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protei... 24 3.9
AY752909-1|AAV30083.1| 92|Anopheles gambiae peroxidase 14 prot... 24 5.2
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 23 9.1
AY062205-1|AAL58566.1| 154|Anopheles gambiae cytochrome P450 CY... 23 9.1
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
phosphoprotein protein.
Length = 1200
Score = 26.6 bits (56), Expect = 0.74
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -3
Query: 589 SRSPGGGASRAHSGQGSAAGLHPREG 512
SRS G SR+ SG GS AG G
Sbjct: 1069 SRSGSGSRSRSRSGSGSRAGSRAGSG 1094
Score = 23.8 bits (49), Expect = 5.2
Identities = 22/80 (27%), Positives = 32/80 (40%)
Frame = -3
Query: 685 RQRRPHGPRAXQCGRARRTLPLPKSGGLLCTCSRSPGGGASRAHSGQGSAAGLHPREGPV 506
R+RR G RR+ +SG + SRS G + + +G GS + R
Sbjct: 1047 RKRRIASDEEDSDGSQRRSRSRSRSGSGSRSRSRSGSGSRAGSRAGSGSRSRSRSRSRSR 1106
Query: 505 RVPGTEDTVQVGSRRSTRRG 446
G+ GSR +R G
Sbjct: 1107 SRSGSAK----GSRSRSRSG 1122
>AJ441131-3|CAD29632.1| 568|Anopheles gambiae putative
apyrase/nucleotidase protein.
Length = 568
Score = 25.4 bits (53), Expect = 1.7
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = -1
Query: 288 LPWDEETVCNSVKKTGRCLISHEAPLTSGFGAELA--ATVQEECF 160
LPW TVC ++ GRC + H++ + S G +A +V E+ F
Sbjct: 4 LPW-LLTVCCALAVVGRCTVLHQS-VDSASGVLIAKQPSVSEQLF 46
>AJ439398-2|CAD28125.1| 568|Anopheles gambiae putative 5'
nucleotidase protein.
Length = 568
Score = 25.4 bits (53), Expect = 1.7
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = -1
Query: 288 LPWDEETVCNSVKKTGRCLISHEAPLTSGFGAELA--ATVQEECF 160
LPW TVC ++ GRC + H++ + S G +A +V E+ F
Sbjct: 4 LPW-LLTVCCALAVVGRCTVLHQS-VDSASGVLIAKQPSVSEQLF 46
>AY578807-1|AAT07312.1| 438|Anopheles gambiae punt protein.
Length = 438
Score = 24.6 bits (51), Expect = 3.0
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +2
Query: 203 PDVSGASWDIKHRPV 247
PD+S +S +I HRP+
Sbjct: 106 PDISNSSTNISHRPI 120
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 24.6 bits (51), Expect = 3.0
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +3
Query: 471 PTCTVSSVPGTRTGPSRGCRPAADPWPL 554
P+C+ S T GCR AD W +
Sbjct: 983 PSCSFCSAIDTLEHKFAGCRRVADAWQI 1010
>EF592176-1|ABQ95972.2| 661|Anopheles gambiae laccase-3 protein.
Length = 661
Score = 24.2 bits (50), Expect = 3.9
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 678 GALTVRAPCSAVGHGGLYHSQSP 610
GAL VR P +G LYH +P
Sbjct: 197 GALIVREPKRVDPNGDLYHYDTP 219
>DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protein
183 protein.
Length = 315
Score = 24.2 bits (50), Expect = 3.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 553 SGQGSAAGLHPREGPVRVP 497
S QG+AA R+GP+R P
Sbjct: 147 SAQGNAASGMVRKGPIRAP 165
>DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protein
183 protein.
Length = 315
Score = 24.2 bits (50), Expect = 3.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 553 SGQGSAAGLHPREGPVRVP 497
S QG+AA R+GP+R P
Sbjct: 147 SAQGNAASGMVRKGPIRAP 165
>AY752909-1|AAV30083.1| 92|Anopheles gambiae peroxidase 14
protein.
Length = 92
Score = 23.8 bits (49), Expect = 5.2
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +3
Query: 528 RPAADPWPLWAREAPPPGDREHVQRRPPDFGSG 626
RP A P + A + PP RE Q FG G
Sbjct: 39 RPLAHPEHVHAGGSAPPVHREQCQPARGHFGGG 71
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 23.0 bits (47), Expect = 9.1
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = -3
Query: 613 SGGLLCTCSRSPGGG--ASRAHSGQGSAAGLH 524
SGG L + S GGG S H G +A G H
Sbjct: 692 SGGGLASGSPYGGGGHHLSHHHGGAAAATGHH 723
>AY062205-1|AAL58566.1| 154|Anopheles gambiae cytochrome P450
CYP4C26 protein.
Length = 154
Score = 23.0 bits (47), Expect = 9.1
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -1
Query: 486 ILYRSAAEEVPVEDYTLPLG 427
++ R E+V V++YT+P G
Sbjct: 77 VIGRRLTEDVRVDNYTIPAG 96
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 707,086
Number of Sequences: 2352
Number of extensions: 15549
Number of successful extensions: 61
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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