Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13p21
(179 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L11618-1|AAB04104.1| 301|Anopheles gambiae ADP/ATP carrier prot... 22 3.0
L11617-1|AAB04105.1| 301|Anopheles gambiae ADP/ATP carrier prot... 22 3.0
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 22 3.0
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 22 3.0
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 22 3.0
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 22 3.0
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 21 5.2
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr... 21 5.2
AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase ... 21 6.9
AY724802-1|AAW50311.1| 134|Anopheles gambiae G protein alpha su... 20 9.1
AY724801-1|AAW50310.1| 134|Anopheles gambiae G protein alpha su... 20 9.1
AY345586-1|AAR09143.1| 427|Anopheles gambiae myosuppressin rece... 20 9.1
>L11618-1|AAB04104.1| 301|Anopheles gambiae ADP/ATP carrier protein
protein.
Length = 301
Score = 21.8 bits (44), Expect = 3.0
Identities = 8/21 (38%), Positives = 10/21 (47%)
Frame = -1
Query: 110 LSRPFSKFLRSAVKSLWPCPS 48
+S PF R + WPC S
Sbjct: 229 ISYPFDTVRRRMMMQSWPCKS 249
>L11617-1|AAB04105.1| 301|Anopheles gambiae ADP/ATP carrier protein
protein.
Length = 301
Score = 21.8 bits (44), Expect = 3.0
Identities = 8/21 (38%), Positives = 10/21 (47%)
Frame = -1
Query: 110 LSRPFSKFLRSAVKSLWPCPS 48
+S PF R + WPC S
Sbjct: 229 ISYPFDTVRRRMMMQSWPCKS 249
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 21.8 bits (44), Expect = 3.0
Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +2
Query: 2 CKCFQKYTLNYRFSQLTGTATTILLLSVKISKM---AVINCFAIVNNVAAERRLVDQIHI 172
C C Q + L + TG+ LL+S KI + ++N +++V + +V+ +
Sbjct: 23 CDCLQGFQLTHSLGGGTGSGMGTLLIS-KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 81
Query: 173 CL 178
L
Sbjct: 82 TL 83
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 21.8 bits (44), Expect = 3.0
Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +2
Query: 2 CKCFQKYTLNYRFSQLTGTATTILLLSVKISKM---AVINCFAIVNNVAAERRLVDQIHI 172
C C Q + L + TG+ LL+S KI + ++N +++V + +V+ +
Sbjct: 23 CDCLQGFQLTHSLGGGTGSGMGTLLIS-KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 81
Query: 173 CL 178
L
Sbjct: 82 TL 83
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 21.8 bits (44), Expect = 3.0
Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +2
Query: 2 CKCFQKYTLNYRFSQLTGTATTILLLSVKISKM---AVINCFAIVNNVAAERRLVDQIHI 172
C C Q + L + TG+ LL+S KI + ++N +++V + +V+ +
Sbjct: 23 CDCLQGFQLTHSLGGGTGSGMGTLLIS-KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 81
Query: 173 CL 178
L
Sbjct: 82 TL 83
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 21.8 bits (44), Expect = 3.0
Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +2
Query: 2 CKCFQKYTLNYRFSQLTGTATTILLLSVKISKM---AVINCFAIVNNVAAERRLVDQIHI 172
C C Q + L + TG+ LL+S KI + ++N +++V + +V+ +
Sbjct: 23 CDCLQGFQLTHSLGGGTGSGMGTLLIS-KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA 81
Query: 173 CL 178
L
Sbjct: 82 TL 83
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 21.0 bits (42), Expect = 5.2
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +1
Query: 1 VQMFSKVHLKLSFFPIDGHGHNDFTAERKNFENGR 105
V ++K LKL + H H+ + + R F G+
Sbjct: 91 VYQWNKPDLKLQYTVSKYHDHSGYGSSRNTFLIGQ 125
>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
protein.
Length = 1253
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = -3
Query: 129 LTIAKQFITAIFEIFTLSSKIVVAVPVNW 43
L + QF+ + F S+I+ + +NW
Sbjct: 992 LILIIQFVAMLMHRFGTISQILASTELNW 1020
>AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase
protein.
Length = 849
Score = 20.6 bits (41), Expect = 6.9
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 68 SLWPCPSIG 42
SL+PCPS G
Sbjct: 246 SLYPCPSSG 254
>AY724802-1|AAW50311.1| 134|Anopheles gambiae G protein alpha
subunit AgOn protein.
Length = 134
Score = 20.2 bits (40), Expect = 9.1
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 107 SRPFSKFLRSAVKSLW 60
+ PFS+ L A+K LW
Sbjct: 104 TEPFSEDLLLAMKRLW 119
>AY724801-1|AAW50310.1| 134|Anopheles gambiae G protein alpha
subunit AgOa protein.
Length = 134
Score = 20.2 bits (40), Expect = 9.1
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 107 SRPFSKFLRSAVKSLW 60
+ PFS+ L A+K LW
Sbjct: 104 TEPFSEDLLLAMKRLW 119
>AY345586-1|AAR09143.1| 427|Anopheles gambiae myosuppressin
receptor protein.
Length = 427
Score = 20.2 bits (40), Expect = 9.1
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2
Query: 35 RFSQLTGTAT 64
R SQLTGTAT
Sbjct: 281 RRSQLTGTAT 290
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,106
Number of Sequences: 2352
Number of extensions: 2518
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 38
effective length of database: 474,603
effective search space used: 9966663
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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