Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13p14
(804 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P21287 Cluster: Uncharacterized 24.8 kDa protein in FGF... 289 4e-77
UniRef50_Q05126 Cluster: Uncharacterized 24.0 kDa protein; n=7; ... 197 2e-49
UniRef50_Q4KT55 Cluster: ORF-25 peptide; n=5; Nucleopolyhedrovir... 100 4e-20
UniRef50_A0T470 Cluster: ORF27; n=5; Nucleopolyhedrovirus|Rep: O... 98 3e-19
UniRef50_A0EYS3 Cluster: Putative uncharacterized protein; n=1; ... 85 1e-15
UniRef50_Q0N478 Cluster: Ac34-like protein; n=5; Nucleopolyhedro... 83 1e-14
UniRef50_O41272 Cluster: ORF 552; n=3; Nucleopolyhedrovirus|Rep:... 81 2e-14
UniRef50_Q9YMT2 Cluster: LdOrf-42 peptide; n=1; Lymantria dispar... 77 5e-13
UniRef50_O96233 Cluster: Putative uncharacterized protein PFB070... 38 0.30
UniRef50_UPI00006CF362 Cluster: hypothetical protein TTHERM_0006... 36 0.90
UniRef50_Q8IBT7 Cluster: Putative uncharacterized protein MAL7P1... 34 3.6
UniRef50_Q05122 Cluster: Uncharacterized 13.4 kDa protein in ubi... 34 3.6
UniRef50_Q86G82 Cluster: DNA mismatch repair enzyme; n=5; Plasmo... 33 6.4
>UniRef50_P21287 Cluster: Uncharacterized 24.8 kDa protein in
FGF-VUBI intergenic region; n=5;
Nucleopolyhedrovirus|Rep: Uncharacterized 24.8 kDa
protein in FGF-VUBI intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 215
Score = 289 bits (710), Expect = 4e-77
Identities = 128/132 (96%), Positives = 129/132 (97%)
Frame = -3
Query: 760 EADDDFKVNQTRNLSCKTVEYLNFLENDKLFRCRLCYTHADWLWCDFHRNHAYRGTRDIA 581
EADDDFKVNQTRNLSCKTVEYLNFLENDKLFRCRLCYTHADWLWCDFHRNHAYRGTRDI
Sbjct: 84 EADDDFKVNQTRNLSCKTVEYLNFLENDKLFRCRLCYTHADWLWCDFHRNHAYRGTRDIT 143
Query: 580 CNNYVEHLNSDMGVVMLVEEYFYCLSSCNFKQDAKLALQTLTNFESLSDLMASYNFSTPD 401
CNNYVEHLNSDMGVVML+EEYFYCLSSCNFKQDAK ALQTLT FESLSDLMASYNFSTPD
Sbjct: 144 CNNYVEHLNSDMGVVMLIEEYFYCLSSCNFKQDAKRALQTLTKFESLSDLMASYNFSTPD 203
Query: 400 LDTNAYELMDFE 365
LDTNAYELMDFE
Sbjct: 204 LDTNAYELMDFE 215
>UniRef50_Q05126 Cluster: Uncharacterized 24.0 kDa protein; n=7;
Nucleopolyhedrovirus|Rep: Uncharacterized 24.0 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 209
Score = 197 bits (481), Expect = 2e-49
Identities = 85/130 (65%), Positives = 107/130 (82%)
Frame = -3
Query: 754 DDDFKVNQTRNLSCKTVEYLNFLENDKLFRCRLCYTHADWLWCDFHRNHAYRGTRDIACN 575
D++F++ Q R+L T+EYLN L++DKLF CRLCYTHA WLWC+FH+ HAYRG RDI+ +
Sbjct: 80 DEEFRIVQQRDLGHNTIEYLNLLQHDKLFSCRLCYTHAHWLWCEFHKTHAYRGPRDISVD 139
Query: 574 NYVEHLNSDMGVVMLVEEYFYCLSSCNFKQDAKLALQTLTNFESLSDLMASYNFSTPDLD 395
YV+HLNSDMGVV LVEEY++ LSSCN K +AK AL+TL N ESL DL+ SYN+S+ D D
Sbjct: 140 AYVDHLNSDMGVVALVEEYYHWLSSCNDKAEAKRALKTLANVESLGDLLDSYNYSSVDAD 199
Query: 394 TNAYELMDFE 365
T++YELMDFE
Sbjct: 200 TSSYELMDFE 209
>UniRef50_Q4KT55 Cluster: ORF-25 peptide; n=5;
Nucleopolyhedrovirus|Rep: ORF-25 peptide - Chrysodeixis
chalcites nucleopolyhedrovirus
Length = 213
Score = 100 bits (240), Expect = 4e-20
Identities = 49/131 (37%), Positives = 78/131 (59%), Gaps = 1/131 (0%)
Frame = -3
Query: 754 DDDFKVNQTRNLSCKTVEYLNFLENDKLFRCRLCYTHADWLWCDFHRNHAYRGTRDIACN 575
D+DF + + LS + +YLN L+ +K + CRLCY L CDFHR + + + ++ +
Sbjct: 77 DEDFSIEEINILSDEARDYLNALQLEKFYHCRLCYHKNAELRCDFHRKYVFDQSSNVNNS 136
Query: 574 NYVEHLNSDMGVVMLVEEYFYCLSSCNFKQDAKLALQTLTNFESLSDLMASYNFS-TPDL 398
Y+E LNS+MGV+ VE Y+ LS +K +A+ + LT F S+ +L+ YN+ D+
Sbjct: 137 AYIEFLNSEMGVISFVELYYSYLSVPFWKLNAQFLFRDLTGFSSIKELLTFYNYDCLDDV 196
Query: 397 DTNAYELMDFE 365
D ++E MD E
Sbjct: 197 DDVSFETMDEE 207
>UniRef50_A0T470 Cluster: ORF27; n=5; Nucleopolyhedrovirus|Rep:
ORF27 - Helicoverpa armigera NPV
Length = 255
Score = 97.9 bits (233), Expect = 3e-19
Identities = 51/131 (38%), Positives = 73/131 (55%), Gaps = 1/131 (0%)
Frame = -3
Query: 754 DDDFKVNQTRNLSCKTVEYLNFLENDKLFRCRLCYTHADWLWCDFHRNHAYRGTRDIACN 575
D+DF +N+ LS + +YLN L+ +K + CR+CY L CDFH+ + + +
Sbjct: 125 DNDFAINEINELSDEARDYLNALQIEKFYTCRMCYHKNANLRCDFHKKYIFDKDMKTYPD 184
Query: 574 NYVEHLNSDMGVVMLVEEYFYCLSSCNFKQDAKLALQTLTNFESLSDLMASYNFS-TPDL 398
YV LNS+MGV+ VE Y+ L + AKL L+ LT F SL L YN++ D+
Sbjct: 185 EYVSFLNSEMGVISFVELYYSYLCVPFWNTTAKLLLRDLTGFTSLKQLFDHYNYAYANDV 244
Query: 397 DTNAYELMDFE 365
D +ELMD E
Sbjct: 245 DEACFELMDCE 255
>UniRef50_A0EYS3 Cluster: Putative uncharacterized protein; n=1;
Ecotropis obliqua NPV|Rep: Putative uncharacterized
protein - Ecotropis obliqua NPV
Length = 189
Score = 85.4 bits (202), Expect = 1e-15
Identities = 43/131 (32%), Positives = 72/131 (54%), Gaps = 1/131 (0%)
Frame = -3
Query: 754 DDDFKVNQTRNLSCKTVEYLNFLENDKLFRCRLCYTHADWLWCDFHRNHAYRGTRDIACN 575
D++F + ++ LS + YLN L+ +K CRLCY D CDFHR + + + +
Sbjct: 59 DENFDIKESIVLSDEVRRYLNVLQIEKFQHCRLCYNKDDSQRCDFHRRYIFCKDPLTSYD 118
Query: 574 NYVEHLNSDMGVVMLVEEYFYCLSSCNFKQDAKLALQTLTNFESLSDLMASYNFSTPD-L 398
Y+E LNS+MG++ VE Y+ LS ++ AK + LT F+ + DL+ Y ++ + +
Sbjct: 119 EYMEFLNSEMGIISFVELYYSYLSVEFWRPTAKFLFRDLTGFDGVKDLLREYKYAADENV 178
Query: 397 DTNAYELMDFE 365
D + MD +
Sbjct: 179 DRIDVQTMDMD 189
>UniRef50_Q0N478 Cluster: Ac34-like protein; n=5;
Nucleopolyhedrovirus|Rep: Ac34-like protein - Clanis
bilineata nucleopolyhedrosis virus
Length = 183
Score = 82.6 bits (195), Expect = 1e-14
Identities = 46/132 (34%), Positives = 73/132 (55%), Gaps = 4/132 (3%)
Frame = -3
Query: 754 DDDFKVNQTRNLSCKTVEYLNFLENDKLFRCRLCY--THADWLWCDFHRNHAYRGTRDIA 581
D+ F + T LS + YLN L+ +KL CR CY T A + C FH+ + + +
Sbjct: 50 DEIFDIKDTNKLSEEARVYLNLLQTEKLNHCRQCYNKTDAQEVRCWFHKKYIFDKCQTKF 109
Query: 580 CNNYVEHLNSDMGVVMLVEEYFYCLSSCN-FKQDAKLALQTLTNFESLSDLMASYNFSTP 404
+ YV+ LNS+MG++ VE Y+ L+ + +K +A + L LT F+S+ L+ YN+
Sbjct: 110 YHEYVDFLNSEMGIISFVELYYVYLALDDVWKHNAPILLDKLTGFKSIKSLLNHYNYECE 169
Query: 403 D-LDTNAYELMD 371
+ DT+ E MD
Sbjct: 170 EAADTSNVECMD 181
>UniRef50_O41272 Cluster: ORF 552; n=3; Nucleopolyhedrovirus|Rep:
ORF 552 - Spodoptera littoralis nuclear polyhedrosis
virus (SlNPV)
Length = 183
Score = 81.4 bits (192), Expect = 2e-14
Identities = 46/130 (35%), Positives = 68/130 (52%), Gaps = 2/130 (1%)
Frame = -3
Query: 754 DDDFKVNQTRNLSCKTVEYLNFLENDKLFRCRLCYTHADWLWCDFHRNHAYRGTRDIACN 575
D++F + +T LS T +YLN L+ +KL+ CR CY D C FH+ + + +
Sbjct: 49 DENFDIAETIELSDATKDYLNVLQLEKLYACRACYERDDSRRCWFHKKYIFTKNMKTHYD 108
Query: 574 NYVEHLNSDMGVVMLVEEYFYCLSSCNF-KQDAKLALQTLTNFESLSDLMASYNFSTP-D 401
YV+ LNS MG+V VE Y+ L++ F AK+ L LT S++ L+ + T D
Sbjct: 109 EYVQFLNSQMGIVSYVELYYTYLAAPPFWNATAKIMLDELTGHSSIASLLKHHGHETSID 168
Query: 400 LDTNAYELMD 371
D A MD
Sbjct: 169 ADEPAAVAMD 178
>UniRef50_Q9YMT2 Cluster: LdOrf-42 peptide; n=1; Lymantria dispar
MNPV|Rep: LdOrf-42 peptide - Lymantria dispar
multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 188
Score = 77.0 bits (181), Expect = 5e-13
Identities = 49/137 (35%), Positives = 71/137 (51%), Gaps = 5/137 (3%)
Frame = -3
Query: 760 EADDDFKVNQTRNLSCKTVEYLNFLENDKLFRCRLCYTHADWLWCDFHRNHAYRGTRDIA 581
E DD+F + + LS + +YLN L+ DKLF CR CY C FH AY + A
Sbjct: 55 EKDDNFDIAERHLLSDEARDYLNALQTDKLFVCRACYHGRAESRCAFHA--AYL-VDERA 111
Query: 580 CNNYVEHLNSDMGVVMLVEEYFYCLSSCN----FKQDAKLALQTLTNFESLSDLMASYNF 413
+ Y+E LN DMG++ VE Y+ LS+ ++ A + LT FE + L+ Y+
Sbjct: 112 GDEYIEFLNGDMGIISRVELYYSHLSAAREEAVWRAQAADVFRKLTGFEGVRALLTHYDR 171
Query: 412 STP-DLDTNAYELMDFE 365
+ P D D +E M +E
Sbjct: 172 AVPADADAAHFECMAYE 188
>UniRef50_O96233 Cluster: Putative uncharacterized protein PFB0700c;
n=2; Plasmodium|Rep: Putative uncharacterized protein
PFB0700c - Plasmodium falciparum (isolate 3D7)
Length = 972
Score = 37.9 bits (84), Expect = 0.30
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Frame = -3
Query: 316 TSLNLRNDVICFSKLNSLYE*NSTCKTQSRDDVICFSKLNLRNDVICLNS---LYE*NST 146
T N ++D+IC +K + + N ++DD IC N +D IC N+ + N
Sbjct: 149 TICNNKDDIICNNKDDIICNNNDDTICNNKDDTIC----NNNDDTICNNNDDTICNNNDD 204
Query: 145 CKTQSRDDVICFSKLNLRND 86
+ DD IC +K +L ND
Sbjct: 205 TICNNNDDTICNNKDDLMND 224
Score = 35.5 bits (78), Expect = 1.6
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = -3
Query: 307 NLRNDVICFSKLNSLYE*NSTCKTQSRDDVICFSK----LNLRNDVICLNSLYE*NSTCK 140
N ++D+IC +K +++ ++DD IC +K N ++D+IC N N
Sbjct: 120 NNKDDIICNNKDDTMCNNKDDTICNNKDDTICNNKDDIICNNKDDIICNN-----NDDTI 174
Query: 139 TQSRDDVICFSKLNLRNDVIC 77
++DD IC N +D IC
Sbjct: 175 CNNKDDTIC----NNNDDTIC 191
Score = 35.5 bits (78), Expect = 1.6
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Frame = -3
Query: 340 VI*SHKLLTSLNLRNDVICFSKLNSLYE*NSTCKTQSRDDVICFSK----LNLRNDVICL 173
+I ++K T N ++D IC +K +++ ++DD+IC + N ++D IC
Sbjct: 125 IICNNKDDTMCNNKDDTICNNKDDTICNNKDDIICNNKDDIICNNNDDTICNNKDDTICN 184
Query: 172 N---SLYE*NSTCKTQSRDDVICFSKLNLRNDVICFSKXE 62
N ++ N + DD IC N +D IC +K +
Sbjct: 185 NNDDTICNNNDDTICNNNDDTIC----NNNDDTICNNKDD 220
>UniRef50_UPI00006CF362 Cluster: hypothetical protein TTHERM_00069700;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00069700 - Tetrahymena thermophila SB210
Length = 1802
Score = 36.3 bits (80), Expect = 0.90
Identities = 35/165 (21%), Positives = 69/165 (41%), Gaps = 7/165 (4%)
Frame = -3
Query: 634 LWCDFHRNHAYRGTRDI----ACNNYVEHLNSDMGVVMLVEEYFYCLSS---CNFKQDAK 476
+W DF H + +I A NN + D +L+ + + + C + +
Sbjct: 1600 VWQDFVITHKKQNKNEIKFMSAMNNLSRLVCIDSANQILIYQLLFNETKNRLCEIRNEK- 1658
Query: 475 LALQTLTNFESLSDLMASYNFSTPDLDTNAYELMDFE*NTMWTLIVI*SHKLLTSLNLRN 296
++T +N S++ +S N D + D + + +I + ++ L + +
Sbjct: 1659 -IIKTCSNISSINTQFSSNNMLACGTDEGIIRIYDIDDENVIKIIKVSLSQIQNLLLVEH 1717
Query: 295 DVICFSKLNSLYE*NSTCKTQSRDDVICFSKLNLRNDVICLNSLY 161
+ +N + S QS DD++ FSK++ ND+I NS Y
Sbjct: 1718 PAQNYQNINYILIVGS----QSDDDLVTFSKISNSNDIISTNSKY 1758
>UniRef50_Q8IBT7 Cluster: Putative uncharacterized protein
MAL7P1.77; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein MAL7P1.77 - Plasmodium
falciparum (isolate 3D7)
Length = 522
Score = 34.3 bits (75), Expect = 3.6
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -3
Query: 331 SHKLLTSLNLRNDVICFSKLN-SLYE*NSTCKTQSRDDVICFSKLNLRNDVI 179
S K T +N+ N CF N L+ N+ C QS+ ++ SK L+ND+I
Sbjct: 431 SFKKCTYVNIDNKDTCFLDYNYMLFLKNNNCALQSKSSLLSISKDLLKNDII 482
>UniRef50_Q05122 Cluster: Uncharacterized 13.4 kDa protein in
ubiquitin 3'region; n=1; Orgyia pseudotsugata MNPV|Rep:
Uncharacterized 13.4 kDa protein in ubiquitin 3'region -
Orgyia pseudotsugata multicapsid polyhedrosis virus
(OpMNPV)
Length = 119
Score = 34.3 bits (75), Expect = 3.6
Identities = 14/41 (34%), Positives = 27/41 (65%)
Frame = +2
Query: 638 IGVRVTKSTAKQFIVFQKIQIFDSFAAEIARLIHFKIVVSF 760
+GVRV + AKQF+V Q++++ +++A L +++V F
Sbjct: 1 MGVRVAQPAAKQFVVLQQVEVLYGVVSQVALLHDAELLVVF 41
>UniRef50_Q86G82 Cluster: DNA mismatch repair enzyme; n=5;
Plasmodium|Rep: DNA mismatch repair enzyme - Plasmodium
falciparum
Length = 1016
Score = 33.5 bits (73), Expect = 6.4
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = -3
Query: 253 NSTCKTQSRDDVICFSKLNLRNDVICLNSLYE*NSTCKTQSRDDVICFSKLNLRNDVIC 77
N TC D+ I + L N++ C N ++ N TC D+ I + L N++ C
Sbjct: 287 NMTCNNLPHDNNITCNNLPHDNNITCNNIPHDNNITCNNLPHDNNITCNNLQHDNNITC 345
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 710,511,630
Number of Sequences: 1657284
Number of extensions: 13230942
Number of successful extensions: 29539
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 27640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29487
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69143070360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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