Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13p11
(455 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051703-1|AAK93127.1| 563|Drosophila melanogaster LD24540p pro... 92 4e-19
AF260235-1|AAF67203.1| 563|Drosophila melanogaster LIGATIN prot... 92 4e-19
AF186594-2|AAG16724.1| 563|Drosophila melanogaster ligatin prot... 92 4e-19
AE014297-4342|AAN14162.1| 563|Drosophila melanogaster CG31426-P... 92 4e-19
BT021222-1|AAX33370.1| 822|Drosophila melanogaster RH55640p pro... 30 1.3
AY060822-1|AAL28370.1| 641|Drosophila melanogaster GM01081p pro... 30 1.3
AE014134-2947|AAF53680.2| 822|Drosophila melanogaster CG10333-P... 30 1.3
AY047559-1|AAK77291.1| 647|Drosophila melanogaster GH07383p pro... 29 2.2
AY047497-1|AAK77229.1| 922|Drosophila melanogaster GH01043p pro... 29 2.2
AE014297-3576|AAF56315.1| 647|Drosophila melanogaster CG13625-P... 29 2.2
AE014297-2490|AAF55529.1| 922|Drosophila melanogaster CG8064-PA... 29 2.2
AE014298-120|AAF45561.2| 311|Drosophila melanogaster CG14632-PA... 28 6.8
AE014298-119|AAN09032.1| 402|Drosophila melanogaster CG14632-PB... 28 6.8
BT021223-1|AAX33371.1| 236|Drosophila melanogaster RH52407p pro... 27 9.1
AY118990-1|AAM50850.1| 618|Drosophila melanogaster LP02703p pro... 27 9.1
AE014296-859|AAF47909.1| 618|Drosophila melanogaster CG11349-PA... 27 9.1
AE014134-229|AAF51395.3| 350|Drosophila melanogaster CG5001-PA ... 27 9.1
>AY051703-1|AAK93127.1| 563|Drosophila melanogaster LD24540p
protein.
Length = 563
Score = 91.9 bits (218), Expect = 4e-19
Identities = 46/96 (47%), Positives = 62/96 (64%)
Frame = -3
Query: 315 VTMQVASRSGNKKVTLVSNLEAYGFNLLELSAVCQRGVAASCGVTRSPGAKHDQLMLQGD 136
+ M +A+RSGNKKVTLVSN+EAYG L E +C++G AAS V + P KH+QL +QG+
Sbjct: 469 IQMSLATRSGNKKVTLVSNIEAYGIILAEFIKLCKQGAAASTSVVKLPHQKHEQLQIQGN 528
Query: 135 QTHFVAKLLIEKYGLPKKFVEGC*QGIKPGRSSPSK 28
Q FV LL E Y +P K + G + K G+ + K
Sbjct: 529 QVRFVHTLLTETYKVPPKCILGL-ELAKDGKKNKKK 563
>AF260235-1|AAF67203.1| 563|Drosophila melanogaster LIGATIN
protein.
Length = 563
Score = 91.9 bits (218), Expect = 4e-19
Identities = 46/96 (47%), Positives = 62/96 (64%)
Frame = -3
Query: 315 VTMQVASRSGNKKVTLVSNLEAYGFNLLELSAVCQRGVAASCGVTRSPGAKHDQLMLQGD 136
+ M +A+RSGNKKVTLVSN+EAYG L E +C++G AAS V + P KH+QL +QG+
Sbjct: 469 IQMSLATRSGNKKVTLVSNIEAYGIILAEFIKLCKQGAAASTSVVKLPHQKHEQLQIQGN 528
Query: 135 QTHFVAKLLIEKYGLPKKFVEGC*QGIKPGRSSPSK 28
Q FV LL E Y +P K + G + K G+ + K
Sbjct: 529 QVRFVHTLLTETYKVPPKCILGL-ELAKDGKKNKKK 563
>AF186594-2|AAG16724.1| 563|Drosophila melanogaster ligatin
protein.
Length = 563
Score = 91.9 bits (218), Expect = 4e-19
Identities = 46/96 (47%), Positives = 62/96 (64%)
Frame = -3
Query: 315 VTMQVASRSGNKKVTLVSNLEAYGFNLLELSAVCQRGVAASCGVTRSPGAKHDQLMLQGD 136
+ M +A+RSGNKKVTLVSN+EAYG L E +C++G AAS V + P KH+QL +QG+
Sbjct: 469 IQMSLATRSGNKKVTLVSNIEAYGIILAEFIKLCKQGAAASTSVVKLPHQKHEQLQIQGN 528
Query: 135 QTHFVAKLLIEKYGLPKKFVEGC*QGIKPGRSSPSK 28
Q FV LL E Y +P K + G + K G+ + K
Sbjct: 529 QVRFVHTLLTETYKVPPKCILGL-ELAKDGKKNKKK 563
>AE014297-4342|AAN14162.1| 563|Drosophila melanogaster CG31426-PA
protein.
Length = 563
Score = 91.9 bits (218), Expect = 4e-19
Identities = 46/96 (47%), Positives = 62/96 (64%)
Frame = -3
Query: 315 VTMQVASRSGNKKVTLVSNLEAYGFNLLELSAVCQRGVAASCGVTRSPGAKHDQLMLQGD 136
+ M +A+RSGNKKVTLVSN+EAYG L E +C++G AAS V + P KH+QL +QG+
Sbjct: 469 IQMSLATRSGNKKVTLVSNIEAYGIILAEFIKLCKQGAAASTSVVKLPHQKHEQLQIQGN 528
Query: 135 QTHFVAKLLIEKYGLPKKFVEGC*QGIKPGRSSPSK 28
Q FV LL E Y +P K + G + K G+ + K
Sbjct: 529 QVRFVHTLLTETYKVPPKCILGL-ELAKDGKKNKKK 563
>BT021222-1|AAX33370.1| 822|Drosophila melanogaster RH55640p
protein.
Length = 822
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -2
Query: 430 GTHNVGGPDVGCAEENDSE-Y*DTVRRRRAEAVQEPPRARHHAGRQPQRKQKGD 272
G NV G D+ + S+ Y D + +RR EA +E + R ++ + KQK D
Sbjct: 303 GRGNVAGIDIKEQKRTQSKFYGDLLEKRRTEAEKEQEKVRLKKMKRKEDKQKWD 356
>AY060822-1|AAL28370.1| 641|Drosophila melanogaster GM01081p
protein.
Length = 641
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -2
Query: 430 GTHNVGGPDVGCAEENDSE-Y*DTVRRRRAEAVQEPPRARHHAGRQPQRKQKGD 272
G NV G D+ + S+ Y D + +RR EA +E + R ++ + KQK D
Sbjct: 122 GRGNVAGIDIKEQKRTQSKFYGDLLEKRRTEAEKEQEKVRLKKMKRKEDKQKWD 175
>AE014134-2947|AAF53680.2| 822|Drosophila melanogaster CG10333-PA
protein.
Length = 822
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -2
Query: 430 GTHNVGGPDVGCAEENDSE-Y*DTVRRRRAEAVQEPPRARHHAGRQPQRKQKGD 272
G NV G D+ + S+ Y D + +RR EA +E + R ++ + KQK D
Sbjct: 303 GRGNVAGIDIKEQKRTQSKFYGDLLEKRRTEAEKEQEKVRLKKMKRKEDKQKWD 356
>AY047559-1|AAK77291.1| 647|Drosophila melanogaster GH07383p
protein.
Length = 647
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 364 TVRRRRAEAVQEPPRARHHAGRQPQRKQKGDSSV*P 257
T RRR ++ Q PPR R + P R+++ DS P
Sbjct: 275 TPPRRRKDSDQSPPRRRKADDQSPVRRERKDSDQSP 310
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 358 RRRRAEAVQEPPRARHHAGRQPQRKQK 278
RRRR+ + Q PPR R P R++K
Sbjct: 255 RRRRSNSDQSPPRRRRDKDSTPPRRRK 281
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 355 RRRAEAVQEPPRARHHAGRQPQRKQKGD 272
RRR + PPR R + + P R++K D
Sbjct: 267 RRRRDKDSTPPRRRKDSDQSPPRRRKAD 294
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 361 VRRRRAEAVQEPPRARHHAGRQPQRKQK 278
VRR R ++ Q PPR R + P R+++
Sbjct: 299 VRRERKDSDQSPPRKRRDNDQSPVRRRR 326
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 355 RRRAEAVQEPPRARHHAGRQPQRKQK 278
RRR + Q PPR R ++ + P R+ K
Sbjct: 334 RRRRDDKQTPPRRRRNSDQSPPRRPK 359
>AY047497-1|AAK77229.1| 922|Drosophila melanogaster GH01043p
protein.
Length = 922
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 118 SNKMCLVSLQHELVVFSARRARDAAGGCHSSLTHCAQLQQVESICF 255
+N +CL SL+ + R+A D + SLT +V S+CF
Sbjct: 369 NNSLCLYSLEASI---KTRKATDPSAKLLRSLTRLGHQSEVRSVCF 411
>AE014297-3576|AAF56315.1| 647|Drosophila melanogaster CG13625-PA
protein.
Length = 647
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 364 TVRRRRAEAVQEPPRARHHAGRQPQRKQKGDSSV*P 257
T RRR ++ Q PPR R + P R+++ DS P
Sbjct: 275 TPPRRRKDSDQSPPRRRKADDQSPVRRERKDSDQSP 310
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 358 RRRRAEAVQEPPRARHHAGRQPQRKQK 278
RRRR+ + Q PPR R P R++K
Sbjct: 255 RRRRSNSDQSPPRRRRDKDSTPPRRRK 281
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 355 RRRAEAVQEPPRARHHAGRQPQRKQKGD 272
RRR + PPR R + + P R++K D
Sbjct: 267 RRRRDKDSTPPRRRKDSDQSPPRRRKAD 294
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 361 VRRRRAEAVQEPPRARHHAGRQPQRKQK 278
VRR R ++ Q PPR R + P R+++
Sbjct: 299 VRRERKDSDQSPPRKRRDNDQSPVRRRR 326
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 355 RRRAEAVQEPPRARHHAGRQPQRKQK 278
RRR + Q PPR R ++ + P R+ K
Sbjct: 334 RRRRDDKQTPPRRRRNSDQSPPRRPK 359
>AE014297-2490|AAF55529.1| 922|Drosophila melanogaster CG8064-PA
protein.
Length = 922
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 118 SNKMCLVSLQHELVVFSARRARDAAGGCHSSLTHCAQLQQVESICF 255
+N +CL SL+ + R+A D + SLT +V S+CF
Sbjct: 369 NNSLCLYSLEASI---KTRKATDPSAKLLRSLTRLGHQSEVRSVCF 411
>AE014298-120|AAF45561.2| 311|Drosophila melanogaster CG14632-PA,
isoform A protein.
Length = 311
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +1
Query: 337 QPQLSVGELYLST-RSHFLQHTRHQVLPRYVFPGLPTQ 447
+PQ G YL T SHF H H + P LPTQ
Sbjct: 101 RPQEVAGSGYLHTFPSHFYHHQVHHLQQHSQPPSLPTQ 138
>AE014298-119|AAN09032.1| 402|Drosophila melanogaster CG14632-PB,
isoform B protein.
Length = 402
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +1
Query: 337 QPQLSVGELYLST-RSHFLQHTRHQVLPRYVFPGLPTQ 447
+PQ G YL T SHF H H + P LPTQ
Sbjct: 101 RPQEVAGSGYLHTFPSHFYHHQVHHLQQHSQPPSLPTQ 138
>BT021223-1|AAX33371.1| 236|Drosophila melanogaster RH52407p
protein.
Length = 236
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = -3
Query: 426 HITWEDLMSGVLKKMTPSTEIQFADGELRLSRSRLEPVTMQVASRSGNK 280
++T E++ G +KKM S I ADG R + ++++ +SG K
Sbjct: 67 YVTLEEIYHGCVKKMKISRRIVQADGSSR-KEEKFLAISIKPGWKSGTK 114
>AY118990-1|AAM50850.1| 618|Drosophila melanogaster LP02703p
protein.
Length = 618
Score = 27.5 bits (58), Expect = 9.1
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Frame = -2
Query: 391 EENDSEY*DTVRRRRAEAVQEPPRARHHAGRQ-----PQRKQKGDSSV*PGSIWIQPVGA 227
+ DSE R RA Q+P A+ G Q P + G +V PG P+GA
Sbjct: 157 QSQDSELNSLTRPDRAAGAQDPAGAQAPTGAQAPGFRPNCQFVGPGNVPPGCGPSDPIGA 216
Query: 226 ERSVSA 209
+ SA
Sbjct: 217 QLPASA 222
>AE014296-859|AAF47909.1| 618|Drosophila melanogaster CG11349-PA
protein.
Length = 618
Score = 27.5 bits (58), Expect = 9.1
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Frame = -2
Query: 391 EENDSEY*DTVRRRRAEAVQEPPRARHHAGRQ-----PQRKQKGDSSV*PGSIWIQPVGA 227
+ DSE R RA Q+P A+ G Q P + G +V PG P+GA
Sbjct: 157 QSQDSELNSLTRPDRAAGAQDPAGAQAPTGAQAPGFRPNCQFVGPGNVPPGCGPSDPIGA 216
Query: 226 ERSVSA 209
+ SA
Sbjct: 217 QLPASA 222
>AE014134-229|AAF51395.3| 350|Drosophila melanogaster CG5001-PA
protein.
Length = 350
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = -3
Query: 426 HITWEDLMSGVLKKMTPSTEIQFADGELRLSRSRLEPVTMQVASRSGNK 280
++T E++ G +KKM S I ADG R + ++++ +SG K
Sbjct: 181 YVTLEEIYHGCVKKMKISRRIVQADGSSR-KEEKFLAISIKPGWKSGTK 228
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,549,953
Number of Sequences: 53049
Number of extensions: 438816
Number of successful extensions: 1976
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1973
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1497419784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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