Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13p07
(788 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41460 Cluster: Uncharacterized 9.9 kDa protein in LEF8... 167 3e-40
UniRef50_P41459 Cluster: Uncharacterized 8.2 kDa protein in LEF8... 91 4e-17
UniRef50_O10314 Cluster: Uncharacterized 9.7 kDa protein; n=6; N... 81 4e-14
UniRef50_O10313 Cluster: Uncharacterized 8.0 kDa protein; n=3; N... 63 9e-09
UniRef50_O10312 Cluster: Uncharacterized 42.5 kDa protein; n=12;... 62 2e-08
UniRef50_Q1HH03 Cluster: Putative uncharacterized protein; n=1; ... 46 8e-04
UniRef50_A0EYU2 Cluster: Vp1054; n=2; Nucleopolyhedrovirus|Rep: ... 42 0.018
UniRef50_Q9J832 Cluster: ORF105 vp1054 virion protein; n=9; Nucl... 41 0.031
UniRef50_Q287G0 Cluster: ORF-112; n=9; Nucleopolyhedrovirus|Rep:... 38 0.29
UniRef50_Q0N459 Cluster: Ac55-like protein; n=1; Clanis bilineat... 36 1.2
UniRef50_Q01778 Cluster: Protein hunchback; n=6; Musca domestica... 36 1.2
UniRef50_Q80LQ5 Cluster: Putative uncharacterized protein; n=1; ... 36 1.5
UniRef50_Q7RQD4 Cluster: Putative uncharacterized protein PY0116... 35 2.0
UniRef50_P05084 Cluster: Protein hunchback; n=64; Schizophora|Re... 35 2.0
UniRef50_Q9J834 Cluster: ORF103; n=1; Spodoptera exigua MNPV|Rep... 34 3.5
UniRef50_Q7RL27 Cluster: Putative uncharacterized protein PY0272... 34 3.5
UniRef50_Q99GZ8 Cluster: ORF50; n=3; Nucleopolyhedrovirus|Rep: O... 34 4.7
UniRef50_Q287G1 Cluster: ORF-111; n=1; Agrotis segetum nucleopol... 34 4.7
UniRef50_Q7QSH0 Cluster: GLP_64_21895_22647; n=1; Giardia lambli... 34 4.7
UniRef50_Q7RIX4 Cluster: Phosphatase; n=5; Plasmodium (Vinckeia)... 33 6.2
UniRef50_Q462C1 Cluster: Orf44; n=1; Trichoplusia ni SNPV|Rep: O... 33 8.2
>UniRef50_P41460 Cluster: Uncharacterized 9.9 kDa protein in LEF8-FP
intergenic region; n=5; Nucleopolyhedrovirus|Rep:
Uncharacterized 9.9 kDa protein in LEF8-FP intergenic
region - Autographa californica nuclear polyhedrosis
virus (AcMNPV)
Length = 84
Score = 167 bits (406), Expect = 3e-40
Identities = 74/78 (94%), Positives = 77/78 (98%)
Frame = -2
Query: 235 MLRSIIRRFKSTNNLSKKPSDHYVVLCPKCYFVTSSEVSVAEYIEMHKNFNTKFADRCPN 56
MLRSI+RRFKSTNNLSKKPSD+YVVLCPKCYFVTS+EVSVAEYIEMHKNFNTKFADRCPN
Sbjct: 1 MLRSIMRRFKSTNNLSKKPSDYYVVLCPKCYFVTSAEVSVAEYIEMHKNFNTKFADRCPN 60
Query: 55 DFIVINSKSWNNHENCSA 2
DFIV NSKSWNNHENCSA
Sbjct: 61 DFIVTNSKSWNNHENCSA 78
>UniRef50_P41459 Cluster: Uncharacterized 8.2 kDa protein in LEF8-FP
intergenic region; n=9; Nucleopolyhedrovirus|Rep:
Uncharacterized 8.2 kDa protein in LEF8-FP intergenic
region - Autographa californica nuclear polyhedrosis
virus (AcMNPV)
Length = 73
Score = 90.6 bits (215), Expect = 4e-17
Identities = 48/77 (62%), Positives = 49/77 (63%)
Frame = -1
Query: 470 MKKVALGKIIENTIEXXXXXXXXXXXXXXXXXXXXXXXXXXSEYYKTFEANKVGQHTTYD 291
MKKVALGKIIENT+E EYYKTFEANKVGQHTTYD
Sbjct: 1 MKKVALGKIIENTVESKYKSNSVSSSLSTGASAKLSLS----EYYKTFEANKVGQHTTYD 56
Query: 290 VVGKRDYNKFDKLVKKY 240
VVGKRDY KFDKLVKKY
Sbjct: 57 VVGKRDYTKFDKLVKKY 73
>UniRef50_O10314 Cluster: Uncharacterized 9.7 kDa protein; n=6;
Nucleopolyhedrovirus|Rep: Uncharacterized 9.7 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 82
Score = 80.6 bits (190), Expect = 4e-14
Identities = 35/76 (46%), Positives = 48/76 (63%)
Frame = -2
Query: 235 MLRSIIRRFKSTNNLSKKPSDHYVVLCPKCYFVTSSEVSVAEYIEMHKNFNTKFADRCPN 56
MLR++ RRFK + ++ + VVLCP+CYFV +SVA+Y MH FN +FAD C N
Sbjct: 1 MLRALRRRFKPAGDERRREEN--VVLCPRCYFVAPGSISVADYTRMHIKFNEQFADECSN 58
Query: 55 DFIVINSKSWNNHENC 8
+ V K+W N+ NC
Sbjct: 59 NLAVTQPKTWFNYTNC 74
>UniRef50_O10313 Cluster: Uncharacterized 8.0 kDa protein; n=3;
Nucleopolyhedrovirus|Rep: Uncharacterized 8.0 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 68
Score = 62.9 bits (146), Expect = 9e-09
Identities = 38/77 (49%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = -1
Query: 470 MKKVALGKIIENTIEXXXXXXXXXXXXXXXXXXXXXXXXXXSEYYKTFEANKVGQHT-TY 294
MKKV+LGKIIE+T+E EYYKTFE+ + GQH+ TY
Sbjct: 1 MKKVSLGKIIESTVEDKYTYRFVRDQKKPNLG----------EYYKTFESIRAGQHSSTY 50
Query: 293 DVVGKRDYNKFDKLVKK 243
DVVGKRDY DKLVKK
Sbjct: 51 DVVGKRDYTVVDKLVKK 67
>UniRef50_O10312 Cluster: Uncharacterized 42.5 kDa protein; n=12;
Nucleopolyhedrovirus|Rep: Uncharacterized 42.5 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 378
Score = 61.7 bits (143), Expect = 2e-08
Identities = 31/59 (52%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Frame = -1
Query: 743 PTKYKRYXELIARQSEA--GGASASLRENVNNQLHARDASQLHLLDWENFMGEFSSYFG 573
P K +RY LIAR S+A G S LRENV+ LHA D + L LLDW+NF+ YFG
Sbjct: 310 PHKDQRYSALIARPSDAATGAGSGDLRENVDGNLHADDITPLILLDWDNFVSALMDYFG 368
>UniRef50_Q1HH03 Cluster: Putative uncharacterized protein; n=1;
Antheraea pernyi nucleopolyhedrovirus|Rep: Putative
uncharacterized protein - Antheraea pernyi nuclear
polyhedrosis virus (ApNPV)
Length = 143
Score = 46.4 bits (105), Expect = 8e-04
Identities = 27/81 (33%), Positives = 38/81 (46%)
Frame = +3
Query: 228 RNMSIFFHQFVKFIVISLADHVVRSVLAHFICFKSFVIFT*TQFCTGTR*R*R*R*RRHT 407
R+M FF Q V F +++ A H VR +L + K F+IF Q R
Sbjct: 35 RSMLAFFDQLVHFAIVAFAHHAVRGLLPDAVGLKRFIIFVEAQLIG--------RPLAAE 86
Query: 408 VAFIFAFYCVFDNFSKRYFFH 470
+F + F NFS+R+FFH
Sbjct: 87 AKLVFVIHNAFYNFSQRHFFH 107
>UniRef50_A0EYU2 Cluster: Vp1054; n=2; Nucleopolyhedrovirus|Rep:
Vp1054 - Ecotropis obliqua NPV
Length = 366
Score = 41.9 bits (94), Expect = 0.018
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = -1
Query: 746 TPTKYKRYXELIARQ---SEAGGASASLRENVNNQLHARDASQLH-LLDWENFMGEFSSY 579
TP YKRY ELI + + G + + R+ N +A + H L+DW NFM +F +Y
Sbjct: 301 TPNNYKRYYELITQPVIIEQNFGENINARDT-NQIQNAESNNTSHVLMDWYNFMFDFRTY 359
Query: 578 FGL 570
FG+
Sbjct: 360 FGI 362
>UniRef50_Q9J832 Cluster: ORF105 vp1054 virion protein; n=9;
Nucleopolyhedrovirus|Rep: ORF105 vp1054 virion protein -
Spodoptera exigua MNPV
Length = 346
Score = 41.1 bits (92), Expect = 0.031
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = -1
Query: 746 TPTKYKRYXELIARQSEAG---GASASLRENVNNQLHARDASQLHLLDWENFMGEFSSYF 576
TP Y+RY ELI QS + ++ NN + + + L +DW NF+ +F YF
Sbjct: 282 TPNNYRRYFELIVAQSVPNRRFDENIDDDDDDNNNNYRNNNTSLIKMDWYNFIDDFRRYF 341
Query: 575 GL 570
G+
Sbjct: 342 GI 343
>UniRef50_Q287G0 Cluster: ORF-112; n=9; Nucleopolyhedrovirus|Rep:
ORF-112 - Agrotis segetum nuclear polyhedrosis virus
(AsNPV)
Length = 69
Score = 37.9 bits (84), Expect = 0.29
Identities = 19/30 (63%), Positives = 24/30 (80%), Gaps = 1/30 (3%)
Frame = -1
Query: 326 EANKVGQHTTYDVVGKRDYNK-FDKLVKKY 240
+A++VG+ TTYDVVGKRDY FD+ KKY
Sbjct: 40 DASRVGRSTTYDVVGKRDYKTLFDE--KKY 67
>UniRef50_Q0N459 Cluster: Ac55-like protein; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: Ac55-like protein - Clanis
bilineata nucleopolyhedrosis virus
Length = 77
Score = 35.9 bits (79), Expect = 1.2
Identities = 16/28 (57%), Positives = 22/28 (78%), Gaps = 2/28 (7%)
Frame = -1
Query: 341 YYKTFEAN--KVGQHTTYDVVGKRDYNK 264
+YK +E + KVG+ TTY+VVG+RDY K
Sbjct: 41 FYKQYEEDTGKVGRMTTYNVVGQRDYKK 68
>UniRef50_Q01778 Cluster: Protein hunchback; n=6; Musca
domestica|Rep: Protein hunchback - Musca domestica
(House fly)
Length = 817
Score = 35.9 bits (79), Expect = 1.2
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -2
Query: 166 VVLCPKCYFVTSSEVSVAEYIEMHKNFNTKFADRCPNDFIVINSKSWNNH 17
++ CPKC FVT + + +I HKN D+C + +N N+H
Sbjct: 315 ILQCPKCPFVTELKHHLEYHIRKHKNLKPFQCDKC--SYSCVNKSMLNSH 362
>UniRef50_Q80LQ5 Cluster: Putative uncharacterized protein; n=1;
Adoxophyes honmai NPV|Rep: Putative uncharacterized
protein - Adoxophyes honmai nucleopolyhedrovirus
Length = 93
Score = 35.5 bits (78), Expect = 1.5
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = -1
Query: 344 EYYKTFEANKVGQHTTYDVVGKRDY 270
E YK + +VG+ TTYD++GKRDY
Sbjct: 58 ENYKAEDKLRVGRCTTYDIIGKRDY 82
>UniRef50_Q7RQD4 Cluster: Putative uncharacterized protein PY01166;
n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY01166 - Plasmodium yoelii yoelii
Length = 786
Score = 35.1 bits (77), Expect = 2.0
Identities = 17/64 (26%), Positives = 35/64 (54%)
Frame = -1
Query: 335 KTFEANKVGQHTTYDVVGKRDYNKFDKLVKKY*HVAINHTTFQEYKQSQQKAFRSLCSVM 156
K F N ++ Y ++ K +Y+K + K H +++ + E+K+++QK F+S
Sbjct: 318 KNFRKNAFKKNIPYIIISKFNYHKLETKYLKA-HQTVDYEKYAEWKENKQKNFKSDGDTN 376
Query: 155 SKVL 144
S+V+
Sbjct: 377 SRVI 380
>UniRef50_P05084 Cluster: Protein hunchback; n=64; Schizophora|Rep:
Protein hunchback - Drosophila melanogaster (Fruit fly)
Length = 758
Score = 35.1 bits (77), Expect = 2.0
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -2
Query: 166 VVLCPKCYFVTSSEVSVAEYIEMHKNFNTKFADRCPNDFIVINSKSWNNH 17
++ CPKC FVT + + +I HKN D+C + +N N+H
Sbjct: 268 ILQCPKCPFVTEFKHHLEYHIRKHKNQKPFQCDKC--SYTCVNKSMLNSH 315
>UniRef50_Q9J834 Cluster: ORF103; n=1; Spodoptera exigua MNPV|Rep:
ORF103 - Spodoptera exigua MNPV
Length = 93
Score = 34.3 bits (75), Expect = 3.5
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -2
Query: 253 W*KNIDMLRSIIRRFKSTNNLSKKPSDHY--VVLCPKCYFVTSSEVSVAEYIEMHKNFNT 80
W K L S + S + + + DH+ VV C KC FV +S YI +HK +N
Sbjct: 3 WAKGTTSL-STTKENTSFEDSAPRRVDHHNQVVYCQKCKFVAPMSLSFENYIRLHKLYNQ 61
Query: 79 KFADRC 62
C
Sbjct: 62 IINGTC 67
>UniRef50_Q7RL27 Cluster: Putative uncharacterized protein PY02720;
n=1; Plasmodium yoelii yoelii|Rep: Putative
uncharacterized protein PY02720 - Plasmodium yoelii
yoelii
Length = 246
Score = 34.3 bits (75), Expect = 3.5
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = -2
Query: 232 LRSIIRRFKSTNNLSKKPSDHYVVLCPKCYFVTSSEVSVAEYIEMHKNFNTKFADRCPND 53
+++II K NNL KPS +++LC F+ S ++ + + + N F R
Sbjct: 164 VKNIINEKKQNNNLFIKPSQLHIILC----FIPSVHFTIRSTLPLLVSDNVSFLFRIDPH 219
Query: 52 FIVINSKSWNN 20
IN +S+N+
Sbjct: 220 HFSINHESFND 230
>UniRef50_Q99GZ8 Cluster: ORF50; n=3; Nucleopolyhedrovirus|Rep:
ORF50 - Helicoverpa zea SNPV
Length = 64
Score = 33.9 bits (74), Expect = 4.7
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -2
Query: 178 SDHYVVLCPKCYFVTSSEVSVAEYIEMHKNFNTKFADRCPND 53
+++ VV C KC FV +S E++ +H+ FN R +D
Sbjct: 19 TENSVVRCVKCLFVAPMSISFEEFLYLHRIFNQAVNTRVAHD 60
>UniRef50_Q287G1 Cluster: ORF-111; n=1; Agrotis segetum
nucleopolyhedrovirus|Rep: ORF-111 - Agrotis segetum
nuclear polyhedrosis virus (AsNPV)
Length = 77
Score = 33.9 bits (74), Expect = 4.7
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -2
Query: 166 VVLCPKCYFVTSSEVSVAEYIEMHKNFNTKFADRCPNDFIVINSK 32
VV C KC F+ +S EY +H+ +N + C I N +
Sbjct: 21 VVYCEKCDFIAPLSLSFEEYTSLHRRYNNIIENVCVTTLISSNCR 65
>UniRef50_Q7QSH0 Cluster: GLP_64_21895_22647; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_21895_22647 - Giardia lamblia
ATCC 50803
Length = 250
Score = 33.9 bits (74), Expect = 4.7
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = -2
Query: 193 LSKKPSDHYVVLCPKCYFVTSSEVSVAE 110
L++KPSDH VVLC C F SS+ + AE
Sbjct: 117 LARKPSDHSVVLCASCGF-QSSDAAFAE 143
>UniRef50_Q7RIX4 Cluster: Phosphatase; n=5; Plasmodium
(Vinckeia)|Rep: Phosphatase - Plasmodium yoelii yoelii
Length = 491
Score = 33.5 bits (73), Expect = 6.2
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = -1
Query: 281 KRDYNKFDKLVKKY*HVAIN----HTTFQEY-KQSQQKAFRSLCSVMSKVLF 141
K DYNK DK++K Y + IN H + +Y S +R++ + ++K+ F
Sbjct: 286 KNDYNKLDKIIKIYHNNCINLENTHDKYMDYIYNSNSSIYRNIYTKLNKIYF 337
>UniRef50_Q462C1 Cluster: Orf44; n=1; Trichoplusia ni SNPV|Rep:
Orf44 - Trichoplusia ni SNPV
Length = 129
Score = 33.1 bits (72), Expect = 8.2
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -2
Query: 166 VVLCPKCYFVTSSEVSVAEYIEMHKNFNTKFADRCPNDFIVINSKS 29
+V C C FV VS +I +H+ +N R P + + N+ S
Sbjct: 59 IVYCSNCNFVAPMSVSYEHFIWLHEKYNCMVNSRGPCAYTISNTNS 104
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 698,605,903
Number of Sequences: 1657284
Number of extensions: 12818220
Number of successful extensions: 32666
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 31554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32654
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67085240885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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