Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13p04
(854 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051777-1|AAK93201.2| 224|Drosophila melanogaster LD30246p pro... 36 0.094
AE014298-2842|AAF48955.1| 211|Drosophila melanogaster CG12200-P... 36 0.094
AY075502-1|AAL68311.1| 431|Drosophila melanogaster RE52190p pro... 31 2.0
AE014298-1412|AAF46555.2| 431|Drosophila melanogaster CG34104-P... 31 2.0
AE014298-1411|ABI30973.1| 582|Drosophila melanogaster CG34104-P... 31 2.0
BT023806-1|AAZ66313.1| 930|Drosophila melanogaster RE64894p pro... 31 2.7
BT001568-1|AAN71323.1| 952|Drosophila melanogaster RE20510p pro... 31 2.7
AY128495-1|AAM75088.1| 930|Drosophila melanogaster RH42893p pro... 31 2.7
AE014297-1759|AAF54988.1| 930|Drosophila melanogaster CG9297-PA... 31 2.7
AE014297-1758|AAN13592.1| 952|Drosophila melanogaster CG9297-PB... 31 2.7
BT029068-1|ABJ17001.1| 219|Drosophila melanogaster IP08077p pro... 29 8.1
AE014297-4198|AAN14131.1| 219|Drosophila melanogaster CG31053-P... 29 8.1
>AY051777-1|AAK93201.2| 224|Drosophila melanogaster LD30246p
protein.
Length = 224
Score = 35.5 bits (78), Expect = 0.094
Identities = 18/79 (22%), Positives = 32/79 (40%)
Frame = -3
Query: 630 YEIYCGHCLGQPEGSATVYNKTLTYFEIYCGHCLGQPEGSATGRICEDMLRKLSLNNNFP 451
+ ++C C + V + CG CLGQ +C +L+ + +N + P
Sbjct: 15 FRVHCNKCFRHRKTDPAVPFHLTQCRHVICGPCLGQSSLEKNCPLCGQVLKAIQINRDMP 74
Query: 450 TVSNIILHFCVSFLMQTIY 394
T ++ +F Q IY
Sbjct: 75 T--SVANYFADPLRFQQIY 91
>AE014298-2842|AAF48955.1| 211|Drosophila melanogaster CG12200-PA
protein.
Length = 211
Score = 35.5 bits (78), Expect = 0.094
Identities = 18/79 (22%), Positives = 32/79 (40%)
Frame = -3
Query: 630 YEIYCGHCLGQPEGSATVYNKTLTYFEIYCGHCLGQPEGSATGRICEDMLRKLSLNNNFP 451
+ ++C C + V + CG CLGQ +C +L+ + +N + P
Sbjct: 2 FRVHCNKCFRHRKTDPAVPFHLTQCRHVICGPCLGQSSLEKNCPLCGQVLKAIQINRDMP 61
Query: 450 TVSNIILHFCVSFLMQTIY 394
T ++ +F Q IY
Sbjct: 62 T--SVANYFADPLRFQQIY 78
>AY075502-1|AAL68311.1| 431|Drosophila melanogaster RE52190p
protein.
Length = 431
Score = 31.1 bits (67), Expect = 2.0
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 105 PSRLSQAKESDALRQRASSPNAPLQQHLATRPPDITPSLTSLRPRLQCHHHL 260
P Q +E L+Q+ P QQH+ +PP + P +++ L+ + HL
Sbjct: 23 PGNPQQHQEQQHLQQQQQQPLTAPQQHMQQQPPPLPPPNANMK-SLKYYEHL 73
>AE014298-1412|AAF46555.2| 431|Drosophila melanogaster CG34104-PA,
isoform A protein.
Length = 431
Score = 31.1 bits (67), Expect = 2.0
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 105 PSRLSQAKESDALRQRASSPNAPLQQHLATRPPDITPSLTSLRPRLQCHHHL 260
P Q +E L+Q+ P QQH+ +PP + P +++ L+ + HL
Sbjct: 23 PGNPQQHQEQQHLQQQQQQPLTAPQQHMQQQPPPLPPPNANMK-SLKYYEHL 73
>AE014298-1411|ABI30973.1| 582|Drosophila melanogaster CG34104-PB,
isoform B protein.
Length = 582
Score = 31.1 bits (67), Expect = 2.0
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 105 PSRLSQAKESDALRQRASSPNAPLQQHLATRPPDITPSLTSLRPRLQCHHHL 260
P Q +E L+Q+ P QQH+ +PP + P +++ L+ + HL
Sbjct: 23 PGNPQQHQEQQHLQQQQQQPLTAPQQHMQQQPPPLPPPNANMK-SLKYYEHL 73
>BT023806-1|AAZ66313.1| 930|Drosophila melanogaster RE64894p
protein.
Length = 930
Score = 30.7 bits (66), Expect = 2.7
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = -3
Query: 387 GDENSSEEGIVA-GSSHHHDDIVPLDGPINAGEDAPPSGEAVL-EDDDDIGG 238
G NS +E I G ++H DD + DG N ED G+ V E+DDD+ G
Sbjct: 151 GVPNSKDEDIDGDGKANHEDDDLDGDGTPNH-EDEDLDGDGVPNEEDDDLDG 201
>BT001568-1|AAN71323.1| 952|Drosophila melanogaster RE20510p
protein.
Length = 952
Score = 30.7 bits (66), Expect = 2.7
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = -3
Query: 387 GDENSSEEGIVA-GSSHHHDDIVPLDGPINAGEDAPPSGEAVL-EDDDDIGG 238
G NS +E I G ++H DD + DG N ED G+ V E+DDD+ G
Sbjct: 173 GVPNSKDEDIDGDGKANHEDDDLDGDGTPNH-EDEDLDGDGVPNEEDDDLDG 223
>AY128495-1|AAM75088.1| 930|Drosophila melanogaster RH42893p
protein.
Length = 930
Score = 30.7 bits (66), Expect = 2.7
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = -3
Query: 387 GDENSSEEGIVA-GSSHHHDDIVPLDGPINAGEDAPPSGEAVL-EDDDDIGG 238
G NS +E I G ++H DD + DG N ED G+ V E+DDD+ G
Sbjct: 151 GVPNSKDEDIDGDGKANHEDDDLDGDGTPNH-EDEDLDGDGVPNEEDDDLDG 201
>AE014297-1759|AAF54988.1| 930|Drosophila melanogaster CG9297-PA,
isoform A protein.
Length = 930
Score = 30.7 bits (66), Expect = 2.7
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = -3
Query: 387 GDENSSEEGIVA-GSSHHHDDIVPLDGPINAGEDAPPSGEAVL-EDDDDIGG 238
G NS +E I G ++H DD + DG N ED G+ V E+DDD+ G
Sbjct: 151 GVPNSKDEDIDGDGKANHEDDDLDGDGTPNH-EDEDLDGDGVPNEEDDDLDG 201
>AE014297-1758|AAN13592.1| 952|Drosophila melanogaster CG9297-PB,
isoform B protein.
Length = 952
Score = 30.7 bits (66), Expect = 2.7
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = -3
Query: 387 GDENSSEEGIVA-GSSHHHDDIVPLDGPINAGEDAPPSGEAVL-EDDDDIGG 238
G NS +E I G ++H DD + DG N ED G+ V E+DDD+ G
Sbjct: 173 GVPNSKDEDIDGDGKANHEDDDLDGDGTPNH-EDEDLDGDGVPNEEDDDLDG 223
>BT029068-1|ABJ17001.1| 219|Drosophila melanogaster IP08077p
protein.
Length = 219
Score = 29.1 bits (62), Expect = 8.1
Identities = 16/79 (20%), Positives = 30/79 (37%)
Frame = -3
Query: 630 YEIYCGHCLGQPEGSATVYNKTLTYFEIYCGHCLGQPEGSATGRICEDMLRKLSLNNNFP 451
+ I+C C + T+ + C CL + +C+ LR + ++ N P
Sbjct: 2 FRIHCNKCFRRRNVEPTLIFHMTQCQHVLCASCLSESSTDKKCPLCKRDLRAIPIDKNLP 61
Query: 450 TVSNIILHFCVSFLMQTIY 394
N+ +F Q +Y
Sbjct: 62 --PNVAQYFEDPLRFQQLY 78
>AE014297-4198|AAN14131.1| 219|Drosophila melanogaster CG31053-PA
protein.
Length = 219
Score = 29.1 bits (62), Expect = 8.1
Identities = 16/79 (20%), Positives = 30/79 (37%)
Frame = -3
Query: 630 YEIYCGHCLGQPEGSATVYNKTLTYFEIYCGHCLGQPEGSATGRICEDMLRKLSLNNNFP 451
+ I+C C + T+ + C CL + +C+ LR + ++ N P
Sbjct: 2 FRIHCNKCFRRRNVEPTLIFHMTQCQHVLCASCLSESSTDKKCPLCKRDLRAIPIDKNLP 61
Query: 450 TVSNIILHFCVSFLMQTIY 394
N+ +F Q +Y
Sbjct: 62 --PNVAQYFEDPLRFQQLY 78
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,823,983
Number of Sequences: 53049
Number of extensions: 818689
Number of successful extensions: 2787
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2779
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4106450400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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