Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13o19
(382 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC129990-1|AAI29991.1| 695|Homo sapiens nuclear fragile X menta... 33 0.31
BC108307-1|AAI08308.1| 695|Homo sapiens nuclear fragile X menta... 33 0.31
AY232289-1|AAP69984.1| 695|Homo sapiens proliferation-inducing ... 33 0.31
AJ493465-1|CAD38278.1| 695|Homo sapiens FMRP interacting protei... 33 0.31
AB037742-1|BAA92559.1| 714|Homo sapiens KIAA1321 protein protein. 33 0.31
AK126104-1|BAC86442.1| 988|Homo sapiens protein ( Homo sapiens ... 30 2.2
BC113841-1|AAI13842.1| 678|Homo sapiens EPB41 protein protein. 30 2.9
BC024314-1|AAH24314.1| 814|Homo sapiens actin filament associat... 30 2.9
AL355302-1|CAI14968.1| 814|Homo sapiens actin filament associat... 30 2.9
AL133384-1|CAI40128.1| 814|Homo sapiens actin filament associat... 30 2.9
AK126089-1|BAC86432.1| 968|Homo sapiens protein ( Homo sapiens ... 29 3.8
BC069239-1|AAH69239.1| 1190|Homo sapiens KIAA1429 protein protein. 29 5.0
BC003701-1|AAH03701.2| 1198|Homo sapiens KIAA1429 protein protein. 29 5.0
AK097433-1|BAC05051.1| 691|Homo sapiens protein ( Homo sapiens ... 29 5.0
AK000668-1|BAA91316.1| 719|Homo sapiens protein ( Homo sapiens ... 29 5.0
AJ311392-1|CAC60255.1| 691|Homo sapiens putative nuclear protei... 29 5.0
AB037850-1|BAA92667.1| 1795|Homo sapiens KIAA1429 protein protein. 29 5.0
AY442317-1|AAR14297.1| 1379|Homo sapiens attractin-like protein ... 29 6.6
AL512304-1|CAH74015.2| 1379|Homo sapiens attractin-like 1 protein. 29 6.6
AL392087-1|CAI40794.2| 1379|Homo sapiens attractin-like 1 protein. 29 6.6
AL357059-1|CAH70625.2| 1379|Homo sapiens attractin-like 1 protein. 29 6.6
AL356100-1|CAI40417.2| 1379|Homo sapiens attractin-like 1 protein. 29 6.6
AL355530-1|CAI13483.2| 1379|Homo sapiens attractin-like 1 protein. 29 6.6
AK127277-1|BAC86914.1| 1233|Homo sapiens protein ( Homo sapiens ... 29 6.6
AB011106-1|BAA25460.2| 1028|Homo sapiens KIAA0534 protein protein. 29 6.6
BC130418-1|AAI30419.1| 1153|Homo sapiens ARID4B protein protein. 28 8.7
BC017800-1|AAH17800.1| 397|Homo sapiens Unknown (protein for IM... 28 8.7
AY220790-1|AAO63590.1| 1312|Homo sapiens SIN3A-associated protei... 28 8.7
AL391994-2|CAI13747.1| 1310|Homo sapiens AT rich interactive dom... 28 8.7
AL391994-1|CAI13746.1| 927|Homo sapiens AT rich interactive dom... 28 8.7
AL133418-5|CAI22961.1| 1310|Homo sapiens AT rich interactive dom... 28 8.7
AL133418-1|CAI22958.1| 927|Homo sapiens AT rich interactive dom... 28 8.7
AF227899-1|AAF36964.1| 873|Homo sapiens breast carcinoma-associ... 28 8.7
AB210032-1|BAE06114.1| 1325|Homo sapiens ARID4B variant protein ... 28 8.7
>BC129990-1|AAI29991.1| 695|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 2 protein.
Length = 695
Score = 33.1 bits (72), Expect = 0.31
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = -3
Query: 287 NSNKIKADLIPDEND--PKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPF 114
N + K+D IP N N N + D+D + TTP+++ N+ K
Sbjct: 175 NQSVDKSDTIPIPNGVVTNNSGYITNGYMGKGADNDGSGSESGYTTPKKRKARRNSAKGC 234
Query: 113 ETLNIESDIIKTEQTDAP 60
E LNI D I ++T P
Sbjct: 235 ENLNIVQDKIMQQETSVP 252
>BC108307-1|AAI08308.1| 695|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 2 protein.
Length = 695
Score = 33.1 bits (72), Expect = 0.31
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = -3
Query: 287 NSNKIKADLIPDEND--PKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPF 114
N + K+D IP N N N + D+D + TTP+++ N+ K
Sbjct: 175 NQSVDKSDTIPIPNGVVTNNSGYITNGYMGKGADNDGSGSESGYTTPKKRKARRNSAKGC 234
Query: 113 ETLNIESDIIKTEQTDAP 60
E LNI D I ++T P
Sbjct: 235 ENLNIVQDKIMQQETSVP 252
>AY232289-1|AAP69984.1| 695|Homo sapiens proliferation-inducing
gene 1 protein.
Length = 695
Score = 33.1 bits (72), Expect = 0.31
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = -3
Query: 287 NSNKIKADLIPDEND--PKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPF 114
N + K+D IP N N N + D+D + TTP+++ N+ K
Sbjct: 175 NQSVDKSDTIPIPNGVVTNNSGYITNGYMGKGADNDGSGSESGYTTPKKRKARRNSAKGC 234
Query: 113 ETLNIESDIIKTEQTDAP 60
E LNI D I ++T P
Sbjct: 235 ENLNIVQDKIMQQETSVP 252
>AJ493465-1|CAD38278.1| 695|Homo sapiens FMRP interacting protein,
82kD protein.
Length = 695
Score = 33.1 bits (72), Expect = 0.31
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = -3
Query: 287 NSNKIKADLIPDEND--PKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPF 114
N + K+D IP N N N + D+D + TTP+++ N+ K
Sbjct: 175 NQSVDKSDTIPIPNGVVTNNSGYITNGYMGKGADNDGSGSESGYTTPKKRKARRNSAKGC 234
Query: 113 ETLNIESDIIKTEQTDAP 60
E LNI D I ++T P
Sbjct: 235 ENLNIVQDKIMQQETSVP 252
>AB037742-1|BAA92559.1| 714|Homo sapiens KIAA1321 protein protein.
Length = 714
Score = 33.1 bits (72), Expect = 0.31
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = -3
Query: 287 NSNKIKADLIPDEND--PKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPF 114
N + K+D IP N N N + D+D + TTP+++ N+ K
Sbjct: 194 NQSVDKSDTIPIPNGVVTNNSGYITNGYMGKGADNDGSGSESGYTTPKKRKARRNSAKGC 253
Query: 113 ETLNIESDIIKTEQTDAP 60
E LNI D I ++T P
Sbjct: 254 ENLNIVQDKIMQQETSVP 271
>AK126104-1|BAC86442.1| 988|Homo sapiens protein ( Homo sapiens
cDNA FLJ44116 fis, clone TESTI4046884. ).
Length = 988
Score = 30.3 bits (65), Expect = 2.2
Identities = 25/102 (24%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Frame = -3
Query: 374 IKMKI-NLCNIQFQSLINLLNLQATTIMSLNSNKIKADLIPDENDPKNVTLRLNSVPEE- 201
+KM I NL +IQ Q L+N L + + S+K +++ I + + +N+ LR++S +
Sbjct: 304 VKMPIENLSSIQ-QKLLNKKRLPKLQPLKMFSDKSESNTINFKENIQNILLRVHSFHSQL 362
Query: 200 CTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTE 75
T N D+ + D+ ++ ++P ++ +I+ +E
Sbjct: 363 LTYAVNIISDMLAVIKNKLDNEISQMEPSSISILKENIVASE 404
>BC113841-1|AAI13842.1| 678|Homo sapiens EPB41 protein protein.
Length = 678
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = -3
Query: 185 NFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTEQTDAPATSGD 45
NF +P P + D ++ PF TLNI I E TD SGD
Sbjct: 548 NFMESVPEPRPSEWDKRLSTHSPFRTLNINGQIPTGEGTD--DNSGD 592
>BC024314-1|AAH24314.1| 814|Homo sapiens actin filament associated
protein 1-like 2 protein.
Length = 814
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = -3
Query: 224 RLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTEQTDA--PATS 51
+L + EEC +++ +DL L+ E KD+ A TL D E A PA++
Sbjct: 715 KLKEIDEECRGEESRRVDLELSIMEVKDNLKKAEAGPVTLGTTVDTTHLENPKAVTPASA 774
Query: 50 GD 45
D
Sbjct: 775 PD 776
>AL355302-1|CAI14968.1| 814|Homo sapiens actin filament associated
protein 1-like 2 protein.
Length = 814
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = -3
Query: 224 RLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTEQTDA--PATS 51
+L + EEC +++ +DL L+ E KD+ A TL D E A PA++
Sbjct: 715 KLKEIDEECRGEESRRVDLELSIMEVKDNLKKAEAGPVTLGTTVDTTHLENPKAVTPASA 774
Query: 50 GD 45
D
Sbjct: 775 PD 776
>AL133384-1|CAI40128.1| 814|Homo sapiens actin filament associated
protein 1-like 2 protein.
Length = 814
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = -3
Query: 224 RLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTEQTDA--PATS 51
+L + EEC +++ +DL L+ E KD+ A TL D E A PA++
Sbjct: 715 KLKEIDEECRGEESRRVDLELSIMEVKDNLKKAEAGPVTLGTTVDTTHLENPKAVTPASA 774
Query: 50 GD 45
D
Sbjct: 775 PD 776
>AK126089-1|BAC86432.1| 968|Homo sapiens protein ( Homo sapiens
cDNA FLJ44101 fis, clone TESTI4043947. ).
Length = 968
Score = 29.5 bits (63), Expect = 3.8
Identities = 25/102 (24%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Frame = -3
Query: 374 IKMKI-NLCNIQFQSLINLLNLQATTIMSLNSNKIKADLIPDENDPKNVTLRLNSVPEE- 201
+KM I NL +IQ Q L+N L + + S+K +++ I + + +N+ LR++S +
Sbjct: 522 VKMPIENLSSIQ-QKLLNKKMLPKLQPLKMFSDKSESNTINFKENIQNILLRVHSFHSQL 580
Query: 200 CTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTE 75
T N D+ + D+ ++ ++P ++ +I+ +E
Sbjct: 581 LTYAVNIISDMLAVIKNKLDNEISQMEPSSISILKENIVASE 622
>BC069239-1|AAH69239.1| 1190|Homo sapiens KIAA1429 protein protein.
Length = 1190
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -3
Query: 332 LINLLNLQATTIMSLNSNKIKADLIPDENDPKNVTLRLNS-VPEECTDDDN 183
L+ + + MS+N+ ++K L E P+N+ L L V E DDDN
Sbjct: 797 LMEVEGAHTSRTMSINAAELKQLLQSKEESPENLFLELEKLVLEHSKDDDN 847
>BC003701-1|AAH03701.2| 1198|Homo sapiens KIAA1429 protein protein.
Length = 1198
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -3
Query: 332 LINLLNLQATTIMSLNSNKIKADLIPDENDPKNVTLRLNS-VPEECTDDDN 183
L+ + + MS+N+ ++K L E P+N+ L L V E DDDN
Sbjct: 805 LMEVEGAHTSRTMSINAAELKQLLQSKEESPENLFLELEKLVLEHSKDDDN 855
>AK097433-1|BAC05051.1| 691|Homo sapiens protein ( Homo sapiens
cDNA FLJ40114 fis, clone TESTI2008762. ).
Length = 691
Score = 29.1 bits (62), Expect = 5.0
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = -3
Query: 257 PDENDPKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDI--I 84
PD+N + NS E DD++ D+P + D N+ + + +SD+
Sbjct: 159 PDDNSDDSEAPDDNSDDSEAPDDNSDDSDVPDDNSDDSSD-DNSDDSSDDNSDDSDVPDD 217
Query: 83 KTEQTDAPATSGDDNN 36
K++ +D P S DD++
Sbjct: 218 KSDDSDVPDDSSDDSD 233
>AK000668-1|BAA91316.1| 719|Homo sapiens protein ( Homo sapiens
cDNA FLJ20661 fis, clone KAIA871. ).
Length = 719
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -3
Query: 332 LINLLNLQATTIMSLNSNKIKADLIPDENDPKNVTLRLNS-VPEECTDDDN 183
L+ + + MS+N+ ++K L E P+N+ L L V E DDDN
Sbjct: 326 LMEVEGAHTSRTMSINAAELKQLLQSKEESPENLFLELEKLVLEHSKDDDN 376
>AJ311392-1|CAC60255.1| 691|Homo sapiens putative nuclear protein
protein.
Length = 691
Score = 29.1 bits (62), Expect = 5.0
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = -3
Query: 257 PDENDPKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDI--I 84
PD+N + NS E DD++ D+P + D N+ + + +SD+
Sbjct: 159 PDDNSDDSEAPDDNSDDSEAPDDNSDDSDVPDDNSDDSSD-DNSDDSSDDNSDDSDVPDD 217
Query: 83 KTEQTDAPATSGDDNN 36
K++ +D P S DD++
Sbjct: 218 KSDDSDVPDDSSDDSD 233
>AB037850-1|BAA92667.1| 1795|Homo sapiens KIAA1429 protein protein.
Length = 1795
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -3
Query: 332 LINLLNLQATTIMSLNSNKIKADLIPDENDPKNVTLRLNS-VPEECTDDDN 183
L+ + + MS+N+ ++K L E P+N+ L L V E DDDN
Sbjct: 1417 LMEVEGAHTSRTMSINAAELKQLLQSKEESPENLFLELEKLVLEHSKDDDN 1467
>AY442317-1|AAR14297.1| 1379|Homo sapiens attractin-like protein
protein.
Length = 1379
Score = 28.7 bits (61), Expect = 6.6
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +2
Query: 176 SRSCRRPCTLRARCSDVT 229
+R C++PC+LR CS+ T
Sbjct: 883 ARPCKKPCSLRTSCSNCT 900
>AL512304-1|CAH74015.2| 1379|Homo sapiens attractin-like 1 protein.
Length = 1379
Score = 28.7 bits (61), Expect = 6.6
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +2
Query: 176 SRSCRRPCTLRARCSDVT 229
+R C++PC+LR CS+ T
Sbjct: 883 ARPCKKPCSLRTSCSNCT 900
>AL392087-1|CAI40794.2| 1379|Homo sapiens attractin-like 1 protein.
Length = 1379
Score = 28.7 bits (61), Expect = 6.6
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +2
Query: 176 SRSCRRPCTLRARCSDVT 229
+R C++PC+LR CS+ T
Sbjct: 883 ARPCKKPCSLRTSCSNCT 900
>AL357059-1|CAH70625.2| 1379|Homo sapiens attractin-like 1 protein.
Length = 1379
Score = 28.7 bits (61), Expect = 6.6
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +2
Query: 176 SRSCRRPCTLRARCSDVT 229
+R C++PC+LR CS+ T
Sbjct: 883 ARPCKKPCSLRTSCSNCT 900
>AL356100-1|CAI40417.2| 1379|Homo sapiens attractin-like 1 protein.
Length = 1379
Score = 28.7 bits (61), Expect = 6.6
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +2
Query: 176 SRSCRRPCTLRARCSDVT 229
+R C++PC+LR CS+ T
Sbjct: 883 ARPCKKPCSLRTSCSNCT 900
>AL355530-1|CAI13483.2| 1379|Homo sapiens attractin-like 1 protein.
Length = 1379
Score = 28.7 bits (61), Expect = 6.6
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +2
Query: 176 SRSCRRPCTLRARCSDVT 229
+R C++PC+LR CS+ T
Sbjct: 883 ARPCKKPCSLRTSCSNCT 900
>AK127277-1|BAC86914.1| 1233|Homo sapiens protein ( Homo sapiens
cDNA FLJ45344 fis, clone BRHIP3010289, moderately
similar to Attractin precursor. ).
Length = 1233
Score = 28.7 bits (61), Expect = 6.6
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +2
Query: 176 SRSCRRPCTLRARCSDVT 229
+R C++PC+LR CS+ T
Sbjct: 737 ARPCKKPCSLRTSCSNCT 754
>AB011106-1|BAA25460.2| 1028|Homo sapiens KIAA0534 protein protein.
Length = 1028
Score = 28.7 bits (61), Expect = 6.6
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +2
Query: 176 SRSCRRPCTLRARCSDVT 229
+R C++PC+LR CS+ T
Sbjct: 532 ARPCKKPCSLRTSCSNCT 549
>BC130418-1|AAI30419.1| 1153|Homo sapiens ARID4B protein protein.
Length = 1153
Score = 28.3 bits (60), Expect = 8.7
Identities = 24/90 (26%), Positives = 36/90 (40%)
Frame = -3
Query: 272 KADLIPDENDPKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIES 93
K ++ P KN+ L S+P + +I P D + + E+LN
Sbjct: 462 KENIKPSLGSKKNL---LESIPTHSDQEKEVNIKKPEDNENLDDKDDDTTRVDESLN--- 515
Query: 92 DIIKTEQTDAPATSGDDNNNRKVVDANEDE 3
IK E + A SGD+ N + D E E
Sbjct: 516 --IKVEAEEEKAKSGDETNKEEDEDDEEAE 543
>BC017800-1|AAH17800.1| 397|Homo sapiens Unknown (protein for
IMAGE:4663973) protein.
Length = 397
Score = 28.3 bits (60), Expect = 8.7
Identities = 24/90 (26%), Positives = 36/90 (40%)
Frame = -3
Query: 272 KADLIPDENDPKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIES 93
K ++ P KN+ L S+P + +I P D + + E+LN
Sbjct: 204 KENIKPSLGSKKNL---LESIPTHSDQEKEVNIKKPEDNENLDDKDDDTTRVDESLN--- 257
Query: 92 DIIKTEQTDAPATSGDDNNNRKVVDANEDE 3
IK E + A SGD+ N + D E E
Sbjct: 258 --IKVEAEEEKAKSGDETNKEEDEDDEEAE 285
>AY220790-1|AAO63590.1| 1312|Homo sapiens SIN3A-associated protein
180 protein.
Length = 1312
Score = 28.3 bits (60), Expect = 8.7
Identities = 24/90 (26%), Positives = 36/90 (40%)
Frame = -3
Query: 272 KADLIPDENDPKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIES 93
K ++ P KN+ L S+P + +I P D + + E+LN
Sbjct: 462 KENIKPSLGSKKNL---LESIPTHSDQEKEVNIKKPEDNENLDDKDDDTTRVDESLN--- 515
Query: 92 DIIKTEQTDAPATSGDDNNNRKVVDANEDE 3
IK E + A SGD+ N + D E E
Sbjct: 516 --IKVEAEEEKAKSGDETNKEEDEDDEEAE 543
>AL391994-2|CAI13747.1| 1310|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1310
Score = 28.3 bits (60), Expect = 8.7
Identities = 24/90 (26%), Positives = 36/90 (40%)
Frame = -3
Query: 272 KADLIPDENDPKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIES 93
K ++ P KN+ L S+P + +I P D + + E+LN
Sbjct: 460 KENIKPSLGSKKNL---LESIPTHSDQEKEVNIKKPEDNENLDDKDDDTTRVDESLN--- 513
Query: 92 DIIKTEQTDAPATSGDDNNNRKVVDANEDE 3
IK E + A SGD+ N + D E E
Sbjct: 514 --IKVEAEEEKAKSGDETNKEEDEDDEEAE 541
>AL391994-1|CAI13746.1| 927|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 927
Score = 28.3 bits (60), Expect = 8.7
Identities = 24/90 (26%), Positives = 36/90 (40%)
Frame = -3
Query: 272 KADLIPDENDPKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIES 93
K ++ P KN+ L S+P + +I P D + + E+LN
Sbjct: 267 KENIKPSLGSKKNL---LESIPTHSDQEKEVNIKKPEDNENLDDKDDDTTRVDESLN--- 320
Query: 92 DIIKTEQTDAPATSGDDNNNRKVVDANEDE 3
IK E + A SGD+ N + D E E
Sbjct: 321 --IKVEAEEEKAKSGDETNKEEDEDDEEAE 348
>AL133418-5|CAI22961.1| 1310|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1310
Score = 28.3 bits (60), Expect = 8.7
Identities = 24/90 (26%), Positives = 36/90 (40%)
Frame = -3
Query: 272 KADLIPDENDPKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIES 93
K ++ P KN+ L S+P + +I P D + + E+LN
Sbjct: 460 KENIKPSLGSKKNL---LESIPTHSDQEKEVNIKKPEDNENLDDKDDDTTRVDESLN--- 513
Query: 92 DIIKTEQTDAPATSGDDNNNRKVVDANEDE 3
IK E + A SGD+ N + D E E
Sbjct: 514 --IKVEAEEEKAKSGDETNKEEDEDDEEAE 541
>AL133418-1|CAI22958.1| 927|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 927
Score = 28.3 bits (60), Expect = 8.7
Identities = 24/90 (26%), Positives = 36/90 (40%)
Frame = -3
Query: 272 KADLIPDENDPKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIES 93
K ++ P KN+ L S+P + +I P D + + E+LN
Sbjct: 267 KENIKPSLGSKKNL---LESIPTHSDQEKEVNIKKPEDNENLDDKDDDTTRVDESLN--- 320
Query: 92 DIIKTEQTDAPATSGDDNNNRKVVDANEDE 3
IK E + A SGD+ N + D E E
Sbjct: 321 --IKVEAEEEKAKSGDETNKEEDEDDEEAE 348
>AF227899-1|AAF36964.1| 873|Homo sapiens breast
carcinoma-associated antigen isoform I protein.
Length = 873
Score = 28.3 bits (60), Expect = 8.7
Identities = 24/90 (26%), Positives = 36/90 (40%)
Frame = -3
Query: 272 KADLIPDENDPKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIES 93
K ++ P KN+ L S+P + +I P D + + E+LN
Sbjct: 23 KENIKPSLGSKKNL---LESIPTHSDQEKEVNIKKPEDNENLDDKDDDTTRVDESLN--- 76
Query: 92 DIIKTEQTDAPATSGDDNNNRKVVDANEDE 3
IK E + A SGD+ N + D E E
Sbjct: 77 --IKVEAEEEKAKSGDETNKEEDEDDEEAE 104
>AB210032-1|BAE06114.1| 1325|Homo sapiens ARID4B variant protein
protein.
Length = 1325
Score = 28.3 bits (60), Expect = 8.7
Identities = 24/90 (26%), Positives = 36/90 (40%)
Frame = -3
Query: 272 KADLIPDENDPKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIES 93
K ++ P KN+ L S+P + +I P D + + E+LN
Sbjct: 475 KENIKPSLGSKKNL---LESIPTHSDQEKEVNIKKPEDNENLDDKDDDTTRVDESLN--- 528
Query: 92 DIIKTEQTDAPATSGDDNNNRKVVDANEDE 3
IK E + A SGD+ N + D E E
Sbjct: 529 --IKVEAEEEKAKSGDETNKEEDEDDEEAE 556
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,938,821
Number of Sequences: 237096
Number of extensions: 861902
Number of successful extensions: 10382
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 10256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10382
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2526356360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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