BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13o19
(382 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X82641-1|CAA57963.1| 643|Drosophila melanogaster alpha 1,2 mann... 34 0.071
AE014298-1434|AAF46571.3| 643|Drosophila melanogaster CG32684-P... 34 0.071
AE014134-2809|AAF53588.1| 1441|Drosophila melanogaster CG15134-P... 31 0.66
AY122110-1|AAM52622.1| 590|Drosophila melanogaster GH12419p pro... 29 1.5
AE014298-3087|AAZ52506.1| 590|Drosophila melanogaster CG11566-P... 29 1.5
AY075464-1|AAL68277.1| 504|Drosophila melanogaster RE18409p pro... 28 3.5
AE014134-2231|AAN10821.1| 487|Drosophila melanogaster CG6167-PB... 28 3.5
AE014134-2230|AAF53213.2| 504|Drosophila melanogaster CG6167-PA... 28 3.5
Z50152-2|CAA90514.1| 3358|Drosophila melanogaster trithorax prot... 27 6.2
Z50152-1|CAA90513.1| 3726|Drosophila melanogaster trithorax prot... 27 6.2
Z31725-2|CAA83515.1| 3358|Drosophila melanogaster predicted trit... 27 6.2
Z31725-1|CAA83516.1| 3726|Drosophila melanogaster predicted trit... 27 6.2
U42767-1|AAC47404.1| 880|Drosophila melanogaster KEK1 precursor... 27 6.2
M31617-1|AAA29025.1| 3759|Drosophila melanogaster protein ( D.me... 27 6.2
DQ138830-1|ABA86436.1| 864|Drosophila melanogaster CG12283 prot... 27 6.2
AY095093-1|AAM11421.1| 810|Drosophila melanogaster SD01674p pro... 27 6.2
AE014297-1828|AAX52951.1| 3358|Drosophila melanogaster CG8651-PE... 27 6.2
AE014297-1827|AAN13601.1| 3358|Drosophila melanogaster CG8651-PC... 27 6.2
AE014297-1826|AAN13600.1| 3358|Drosophila melanogaster CG8651-PB... 27 6.2
AE014297-1825|AAN13599.1| 3726|Drosophila melanogaster CG8651-PD... 27 6.2
AE014297-1824|AAF55041.2| 3726|Drosophila melanogaster CG8651-PA... 27 6.2
AE014134-2259|AAF53225.2| 811|Drosophila melanogaster CG12283-P... 27 6.2
DQ138932-1|ABA86538.1| 1387|Drosophila melanogaster CG12105 prot... 27 8.2
BT030433-1|ABO52853.1| 664|Drosophila melanogaster IP18260p pro... 27 8.2
AY051503-1|AAK92927.1| 2028|Drosophila melanogaster GH15471p pro... 27 8.2
AE014297-2147|ABI31172.1| 1923|Drosophila melanogaster CG31045-P... 27 8.2
AE014297-2146|ABI31171.1| 2160|Drosophila melanogaster CG31045-P... 27 8.2
AE014297-2145|AAN13695.2| 2194|Drosophila melanogaster CG31045-P... 27 8.2
AE014297-2143|AAF55271.3| 2148|Drosophila melanogaster CG31045-P... 27 8.2
AE014296-1693|AAF50239.2| 1937|Drosophila melanogaster CG3280-PA... 27 8.2
>X82641-1|CAA57963.1| 643|Drosophila melanogaster alpha 1,2
mannosidase protein.
Length = 643
Score = 33.9 bits (74), Expect = 0.071
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = -3
Query: 350 NIQFQSLINLLNLQATTIMSLNSNKIKADLIPDENDPKNVTLRLNSVPEECTDDD 186
NI ++I L A+ +S N N+IK +L N P+NV L+LN+ + DD+
Sbjct: 34 NINLSNIIRLNEKVASDSVSNNENQIK-ELNYVNNHPRNVYLKLNASSRDDEDDE 87
>AE014298-1434|AAF46571.3| 643|Drosophila melanogaster CG32684-PB,
isoform B protein.
Length = 643
Score = 33.9 bits (74), Expect = 0.071
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = -3
Query: 350 NIQFQSLINLLNLQATTIMSLNSNKIKADLIPDENDPKNVTLRLNSVPEECTDDD 186
NI ++I L A+ +S N N+IK +L N P+NV L+LN+ + DD+
Sbjct: 34 NINLSNIIRLNEKVASDSVSNNENQIK-ELNYVNNHPRNVYLKLNASSRDDEDDE 87
>AE014134-2809|AAF53588.1| 1441|Drosophila melanogaster CG15134-PA
protein.
Length = 1441
Score = 30.7 bits (66), Expect = 0.66
Identities = 28/86 (32%), Positives = 43/86 (50%)
Frame = +1
Query: 85 IISDSIFKVSKGLMAFIKSSFCSGVVNGKSIEKLSSSVHSSGTLFRRNVTFLGSFSSGIK 264
I+ DSI K+ + F C GV+ + I K S++ SS F N++ +G+F S I+
Sbjct: 748 IMQDSI-KLLDAHLIFEPLLTCLGVMPQQMINKFSNADISSLENFGTNLSLIGTFDS-IR 805
Query: 265 SALILLELSDIMVVACKFNKLIKD*N 342
+++ E D A K KL K N
Sbjct: 806 VDIVVSEAGDKKNSAQKPAKLNKKSN 831
>AY122110-1|AAM52622.1| 590|Drosophila melanogaster GH12419p
protein.
Length = 590
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = -3
Query: 371 KMKINLCNIQFQSLINLLNLQATTIMSLNSNKIKADLIPDENDPKNVTLRLNSVPEE 201
K ++ CN+ +S LN + T S++S + A L+P DP +P+E
Sbjct: 168 KPAVSKCNLHSRSFAKSLN-ELCTDTSVSSTHVPAPLLPSAADPLPAPALFADLPQE 223
>AE014298-3087|AAZ52506.1| 590|Drosophila melanogaster CG11566-PA
protein.
Length = 590
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = -3
Query: 371 KMKINLCNIQFQSLINLLNLQATTIMSLNSNKIKADLIPDENDPKNVTLRLNSVPEE 201
K ++ CN+ +S LN + T S++S + A L+P DP +P+E
Sbjct: 168 KPAVSKCNLHSRSFAKSLN-ELCTDTSVSSTHVPAPLLPSAADPLPAPALFADLPQE 223
>AY075464-1|AAL68277.1| 504|Drosophila melanogaster RE18409p
protein.
Length = 504
Score = 28.3 bits (60), Expect = 3.5
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Frame = -3
Query: 350 NIQFQSLI-NLLNLQATTIMSLNSNKIKADLIPDENDPKNVTLRLNSV---PEECTDDDN 183
N Q +SL+ +L L + + L+S L P E D K + S P+E DD+
Sbjct: 333 NKQLRSLLESLAELHRSLVDRLDS---LPPLFPIEVDFKETDFQYKSSTLKPQELDDDEI 389
Query: 182 FSIDLPLTTPEQKDDFMNAI-KPFETLNIES 93
+ + P +TP Q D A+ +P +N+E+
Sbjct: 390 EANNHPHSTPSQVDCGFEAVEQPAAIINVEA 420
>AE014134-2231|AAN10821.1| 487|Drosophila melanogaster CG6167-PB,
isoform B protein.
Length = 487
Score = 28.3 bits (60), Expect = 3.5
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Frame = -3
Query: 350 NIQFQSLI-NLLNLQATTIMSLNSNKIKADLIPDENDPKNVTLRLNSV---PEECTDDDN 183
N Q +SL+ +L L + + L+S L P E D K + S P+E DD+
Sbjct: 316 NKQLRSLLESLAELHRSLVDRLDS---LPPLFPIEVDFKETDFQYKSSTLKPQELDDDEI 372
Query: 182 FSIDLPLTTPEQKDDFMNAI-KPFETLNIES 93
+ + P +TP Q D A+ +P +N+E+
Sbjct: 373 EANNHPHSTPSQVDCGFEAVEQPAAIINVEA 403
>AE014134-2230|AAF53213.2| 504|Drosophila melanogaster CG6167-PA,
isoform A protein.
Length = 504
Score = 28.3 bits (60), Expect = 3.5
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Frame = -3
Query: 350 NIQFQSLI-NLLNLQATTIMSLNSNKIKADLIPDENDPKNVTLRLNSV---PEECTDDDN 183
N Q +SL+ +L L + + L+S L P E D K + S P+E DD+
Sbjct: 333 NKQLRSLLESLAELHRSLVDRLDS---LPPLFPIEVDFKETDFQYKSSTLKPQELDDDEI 389
Query: 182 FSIDLPLTTPEQKDDFMNAI-KPFETLNIES 93
+ + P +TP Q D A+ +P +N+E+
Sbjct: 390 EANNHPHSTPSQVDCGFEAVEQPAAIINVEA 420
>Z50152-2|CAA90514.1| 3358|Drosophila melanogaster trithorax protein
trxI protein.
Length = 3358
Score = 27.5 bits (58), Expect = 6.2
Identities = 22/81 (27%), Positives = 40/81 (49%)
Frame = -3
Query: 254 DENDPKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTE 75
DE+D VT R N PE+ + ++ +D E ++D N E + +S +TE
Sbjct: 170 DEDDEGGVTFRRNDSPEDQNNAEDDEMDDDDDDEEAEEDDQNEDDNDEAASEKS--AETE 227
Query: 74 QTDAPATSGDDNNNRKVVDAN 12
++ A A D + + V+D++
Sbjct: 228 KS-AGADERDPDEKQLVMDSH 247
>Z50152-1|CAA90513.1| 3726|Drosophila melanogaster trithorax protein
trxII protein.
Length = 3726
Score = 27.5 bits (58), Expect = 6.2
Identities = 22/81 (27%), Positives = 40/81 (49%)
Frame = -3
Query: 254 DENDPKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTE 75
DE+D VT R N PE+ + ++ +D E ++D N E + +S +TE
Sbjct: 538 DEDDEGGVTFRRNDSPEDQNNAEDDEMDDDDDDEEAEEDDQNEDDNDEAASEKS--AETE 595
Query: 74 QTDAPATSGDDNNNRKVVDAN 12
++ A A D + + V+D++
Sbjct: 596 KS-AGADERDPDEKQLVMDSH 615
>Z31725-2|CAA83515.1| 3358|Drosophila melanogaster predicted
trithorax protein protein.
Length = 3358
Score = 27.5 bits (58), Expect = 6.2
Identities = 22/81 (27%), Positives = 40/81 (49%)
Frame = -3
Query: 254 DENDPKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTE 75
DE+D VT R N PE+ + ++ +D E ++D N E + +S +TE
Sbjct: 170 DEDDEGGVTFRRNDSPEDQNNAEDDEMDDDDDDEEAEEDDQNEDDNDEAASEKS--AETE 227
Query: 74 QTDAPATSGDDNNNRKVVDAN 12
++ A A D + + V+D++
Sbjct: 228 KS-AGADERDPDEKQLVMDSH 247
>Z31725-1|CAA83516.1| 3726|Drosophila melanogaster predicted
trithorax protein protein.
Length = 3726
Score = 27.5 bits (58), Expect = 6.2
Identities = 22/81 (27%), Positives = 40/81 (49%)
Frame = -3
Query: 254 DENDPKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTE 75
DE+D VT R N PE+ + ++ +D E ++D N E + +S +TE
Sbjct: 538 DEDDEGGVTFRRNDSPEDQNNAEDDEMDDDDDDEEAEEDDQNEDDNDEAASEKS--AETE 595
Query: 74 QTDAPATSGDDNNNRKVVDAN 12
++ A A D + + V+D++
Sbjct: 596 KS-AGADERDPDEKQLVMDSH 615
>U42767-1|AAC47404.1| 880|Drosophila melanogaster KEK1 precursor
protein.
Length = 880
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = -3
Query: 371 KMKINLCNIQFQSLINLLNLQATTIMSLNSNKIKADLIP 255
K+ ++ C+IQ S LQ T++ LN NK+ ++L+P
Sbjct: 223 KLDLSHCDIQTISAQAFGGLQGLTLLRLNGNKL-SELLP 260
>M31617-1|AAA29025.1| 3759|Drosophila melanogaster protein (
D.melanogaster zinc-binding protein (trithorax) mRNA,
complete cds. ).
Length = 3759
Score = 27.5 bits (58), Expect = 6.2
Identities = 22/81 (27%), Positives = 40/81 (49%)
Frame = -3
Query: 254 DENDPKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTE 75
DE+D VT R N PE+ + ++ +D E ++D N E + +S +TE
Sbjct: 538 DEDDEGGVTFRRNDSPEDQNNAEDDEMDDDDDDEEAEEDDQNEDDNDEAASEKS--AETE 595
Query: 74 QTDAPATSGDDNNNRKVVDAN 12
++ A A D + + V+D++
Sbjct: 596 KS-AGADERDPDEKQLVMDSH 615
>DQ138830-1|ABA86436.1| 864|Drosophila melanogaster CG12283
protein.
Length = 864
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = -3
Query: 371 KMKINLCNIQFQSLINLLNLQATTIMSLNSNKIKADLIP 255
K+ ++ C+IQ S LQ T++ LN NK+ ++L+P
Sbjct: 215 KLDLSHCDIQTISAQAFGGLQGLTLLRLNGNKL-SELLP 252
>AY095093-1|AAM11421.1| 810|Drosophila melanogaster SD01674p
protein.
Length = 810
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = -3
Query: 371 KMKINLCNIQFQSLINLLNLQATTIMSLNSNKIKADLIP 255
K+ ++ C+IQ S LQ T++ LN NK+ ++L+P
Sbjct: 223 KLDLSHCDIQTISAQAFGGLQGLTLLRLNGNKL-SELLP 260
>AE014297-1828|AAX52951.1| 3358|Drosophila melanogaster CG8651-PE,
isoform E protein.
Length = 3358
Score = 27.5 bits (58), Expect = 6.2
Identities = 22/81 (27%), Positives = 41/81 (50%)
Frame = -3
Query: 254 DENDPKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTE 75
DE+D VT R N PE+ + ++ +D E ++D N E ++ +S +TE
Sbjct: 170 DEDDEGGVTFRRNDSPEDQNNAEDDEMDDDDDDEEAEEDDENEDDNDEAVSEKS--AETE 227
Query: 74 QTDAPATSGDDNNNRKVVDAN 12
++ A A D + + V+D++
Sbjct: 228 KS-AGADERDPDEKQLVMDSH 247
>AE014297-1827|AAN13601.1| 3358|Drosophila melanogaster CG8651-PC,
isoform C protein.
Length = 3358
Score = 27.5 bits (58), Expect = 6.2
Identities = 22/81 (27%), Positives = 41/81 (50%)
Frame = -3
Query: 254 DENDPKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTE 75
DE+D VT R N PE+ + ++ +D E ++D N E ++ +S +TE
Sbjct: 170 DEDDEGGVTFRRNDSPEDQNNAEDDEMDDDDDDEEAEEDDENEDDNDEAVSEKS--AETE 227
Query: 74 QTDAPATSGDDNNNRKVVDAN 12
++ A A D + + V+D++
Sbjct: 228 KS-AGADERDPDEKQLVMDSH 247
>AE014297-1826|AAN13600.1| 3358|Drosophila melanogaster CG8651-PB,
isoform B protein.
Length = 3358
Score = 27.5 bits (58), Expect = 6.2
Identities = 22/81 (27%), Positives = 41/81 (50%)
Frame = -3
Query: 254 DENDPKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTE 75
DE+D VT R N PE+ + ++ +D E ++D N E ++ +S +TE
Sbjct: 170 DEDDEGGVTFRRNDSPEDQNNAEDDEMDDDDDDEEAEEDDENEDDNDEAVSEKS--AETE 227
Query: 74 QTDAPATSGDDNNNRKVVDAN 12
++ A A D + + V+D++
Sbjct: 228 KS-AGADERDPDEKQLVMDSH 247
>AE014297-1825|AAN13599.1| 3726|Drosophila melanogaster CG8651-PD,
isoform D protein.
Length = 3726
Score = 27.5 bits (58), Expect = 6.2
Identities = 22/81 (27%), Positives = 41/81 (50%)
Frame = -3
Query: 254 DENDPKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTE 75
DE+D VT R N PE+ + ++ +D E ++D N E ++ +S +TE
Sbjct: 538 DEDDEGGVTFRRNDSPEDQNNAEDDEMDDDDDDEEAEEDDENEDDNDEAVSEKS--AETE 595
Query: 74 QTDAPATSGDDNNNRKVVDAN 12
++ A A D + + V+D++
Sbjct: 596 KS-AGADERDPDEKQLVMDSH 615
>AE014297-1824|AAF55041.2| 3726|Drosophila melanogaster CG8651-PA,
isoform A protein.
Length = 3726
Score = 27.5 bits (58), Expect = 6.2
Identities = 22/81 (27%), Positives = 41/81 (50%)
Frame = -3
Query: 254 DENDPKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTE 75
DE+D VT R N PE+ + ++ +D E ++D N E ++ +S +TE
Sbjct: 538 DEDDEGGVTFRRNDSPEDQNNAEDDEMDDDDDDEEAEEDDENEDDNDEAVSEKS--AETE 595
Query: 74 QTDAPATSGDDNNNRKVVDAN 12
++ A A D + + V+D++
Sbjct: 596 KS-AGADERDPDEKQLVMDSH 615
>AE014134-2259|AAF53225.2| 811|Drosophila melanogaster CG12283-PA
protein.
Length = 811
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = -3
Query: 371 KMKINLCNIQFQSLINLLNLQATTIMSLNSNKIKADLIP 255
K+ ++ C+IQ S LQ T++ LN NK+ ++L+P
Sbjct: 223 KLDLSHCDIQTISAQAFGGLQGLTLLRLNGNKL-SELLP 260
>DQ138932-1|ABA86538.1| 1387|Drosophila melanogaster CG12105
protein.
Length = 1387
Score = 27.1 bits (57), Expect = 8.2
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -3
Query: 92 DIIKTEQTDAPATSGDDNNNRKVVDANEDE 3
++ EQ D P DDNNN + E
Sbjct: 411 EVYPAEQLDQPTEQADDNNNTSATEQQPSE 440
>BT030433-1|ABO52853.1| 664|Drosophila melanogaster IP18260p
protein.
Length = 664
Score = 27.1 bits (57), Expect = 8.2
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -3
Query: 143 DDFMNAIKPFETLNIESDIIK 81
+DFM ++ FETLNI++ ++
Sbjct: 559 NDFMRTVQAFETLNIDAKAVR 579
>AY051503-1|AAK92927.1| 2028|Drosophila melanogaster GH15471p
protein.
Length = 2028
Score = 27.1 bits (57), Expect = 8.2
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -3
Query: 143 DDFMNAIKPFETLNIESDIIK 81
+DFM ++ FETLNI++ ++
Sbjct: 676 NDFMRTVQAFETLNIDAKAVR 696
>AE014297-2147|ABI31172.1| 1923|Drosophila melanogaster CG31045-PF,
isoform F protein.
Length = 1923
Score = 27.1 bits (57), Expect = 8.2
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -3
Query: 143 DDFMNAIKPFETLNIESDIIK 81
+DFM ++ FETLNI++ ++
Sbjct: 559 NDFMRTVQAFETLNIDAKAVR 579
>AE014297-2146|ABI31171.1| 2160|Drosophila melanogaster CG31045-PG,
isoform G protein.
Length = 2160
Score = 27.1 bits (57), Expect = 8.2
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -3
Query: 143 DDFMNAIKPFETLNIESDIIK 81
+DFM ++ FETLNI++ ++
Sbjct: 796 NDFMRTVQAFETLNIDAKAVR 816
>AE014297-2145|AAN13695.2| 2194|Drosophila melanogaster CG31045-PB,
isoform B protein.
Length = 2194
Score = 27.1 bits (57), Expect = 8.2
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -3
Query: 143 DDFMNAIKPFETLNIESDIIK 81
+DFM ++ FETLNI++ ++
Sbjct: 796 NDFMRTVQAFETLNIDAKAVR 816
>AE014297-2143|AAF55271.3| 2148|Drosophila melanogaster CG31045-PA,
isoform A protein.
Length = 2148
Score = 27.1 bits (57), Expect = 8.2
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -3
Query: 143 DDFMNAIKPFETLNIESDIIK 81
+DFM ++ FETLNI++ ++
Sbjct: 796 NDFMRTVQAFETLNIDAKAVR 816
>AE014296-1693|AAF50239.2| 1937|Drosophila melanogaster CG3280-PA
protein.
Length = 1937
Score = 27.1 bits (57), Expect = 8.2
Identities = 11/50 (22%), Positives = 27/50 (54%)
Frame = -3
Query: 371 KMKINLCNIQFQSLINLLNLQATTIMSLNSNKIKADLIPDENDPKNVTLR 222
++++ L I +++NL +L + I +NS + ++ EN+ + L+
Sbjct: 496 QLRLQLARIMILNMLNLYSLMFSFIYKINSKEKPLQMLKLENETNTMELK 545
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,173,367
Number of Sequences: 53049
Number of extensions: 289546
Number of successful extensions: 1190
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1190
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1024276155
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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