Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13o16
(732 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 330 9e-91
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 328 2e-90
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 328 4e-90
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 327 6e-90
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 322 1e-88
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 322 1e-88
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 320 5e-88
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 318 4e-87
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 313 1e-85
12_02_1282 + 27528159-27529148,27529549-27529614 256 2e-68
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 125 4e-29
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 122 2e-28
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 106 2e-23
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 103 1e-22
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 103 2e-22
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 82 5e-16
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 82 5e-16
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 76 3e-14
11_06_0115 + 20288220-20288303,20289223-20289706,20290160-202903... 33 0.31
11_03_0057 + 9375083-9375088,9375904-9376031,9376107-9376166,937... 33 0.31
02_01_0567 - 4168164-4168250,4168672-4168828,4168951-4169090,417... 33 0.31
02_03_0121 + 15468894-15468906,15469008-15469193,15474157-154746... 32 0.54
02_02_0520 + 11152718-11153600,11153736-11153917,11154160-111542... 32 0.54
05_01_0311 + 2452230-2452232,2452401-2452809,2454136-2454263,245... 31 0.71
04_03_1017 + 21747044-21748051 31 0.71
07_01_1204 - 11469953-11470618 31 1.2
01_06_0628 + 30707353-30707548,30707846-30707958,30708090-307081... 30 1.6
09_06_0375 - 22653366-22657112,22657185-22658457,22658833-22659539 30 2.2
06_03_1248 + 28685911-28687719 29 2.9
08_02_0238 + 14665813-14668798,14669088-14669125 29 3.8
01_06_1118 - 34636919-34637031,34637032-34637082,34637250-346372... 29 3.8
06_03_0559 + 22148773-22149210,22149478-22149684,22150065-221504... 29 5.0
11_02_0059 - 7883980-7884141,7884423-7884467,7884629-7884715,788... 28 6.6
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 28 6.6
04_03_0830 - 20125827-20125913,20126262-20126357,20126974-201270... 28 6.6
03_02_0609 - 9823120-9823573,9823903-9824102,9824240-9824335,982... 28 6.6
07_03_0496 - 18758767-18760113 28 8.8
04_03_0624 - 18115559-18115725,18115993-18116872 28 8.8
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 330 bits (810), Expect = 9e-91
Identities = 154/174 (88%), Positives = 163/174 (93%)
Frame = -2
Query: 731 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 552
TTAEREIVRDIKEKL Y+ALD+EQE+ TA SSSS+EKSYELPDGQVITIG ERFRCPE L
Sbjct: 201 TTAEREIVRDIKEKLAYIALDYEQELETAKSSSSVEKSYELPDGQVITIGAERFRCPEVL 260
Query: 551 FQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 372
FQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADRM KEITALA
Sbjct: 261 FQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALA 320
Query: 371 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 210
PS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct: 321 PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 374
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 328 bits (807), Expect = 2e-90
Identities = 152/174 (87%), Positives = 164/174 (94%)
Frame = -2
Query: 731 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 552
TTAEREIVRD+KEKL Y+ALD++QEM TA +SSS+EKSYELPDGQVITIG ERFRCPE L
Sbjct: 204 TTAEREIVRDMKEKLSYIALDYDQEMETAKTSSSVEKSYELPDGQVITIGAERFRCPEVL 263
Query: 551 FQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 372
FQPSF+GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADRM KEITALA
Sbjct: 264 FQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALA 323
Query: 371 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 210
PS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct: 324 PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 328 bits (805), Expect = 4e-90
Identities = 151/174 (86%), Positives = 164/174 (94%)
Frame = -2
Query: 731 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 552
T+AEREIVRDIKEKL YVALD+EQE+ TA +SSS+EKSYELPDGQVITIG+ERFRCPE L
Sbjct: 204 TSAEREIVRDIKEKLAYVALDYEQELETAKNSSSIEKSYELPDGQVITIGSERFRCPEVL 263
Query: 551 FQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 372
FQPS +GME+ GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADRM KEITALA
Sbjct: 264 FQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIADRMSKEITALA 323
Query: 371 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 210
PS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP+IVHRKCF
Sbjct: 324 PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKDEYDESGPAIVHRKCF 377
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 327 bits (803), Expect = 6e-90
Identities = 152/174 (87%), Positives = 163/174 (93%)
Frame = -2
Query: 731 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 552
T+AEREIVRDIKEKL YVALD+EQE+ TA +SSS+EKSYELPDGQVITIG ERFRCPE L
Sbjct: 204 TSAEREIVRDIKEKLAYVALDYEQELETAKNSSSVEKSYELPDGQVITIGAERFRCPEVL 263
Query: 551 FQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 372
FQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADRM KEITALA
Sbjct: 264 FQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALA 323
Query: 371 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 210
PS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP+IVHRKCF
Sbjct: 324 PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKDEYDESGPAIVHRKCF 377
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 322 bits (792), Expect = 1e-88
Identities = 149/174 (85%), Positives = 163/174 (93%)
Frame = -2
Query: 731 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 552
T+AEREIVRDIKEKL YVALD+EQE+ TA SSSS+EKSYELPDGQVITIG ERFRCPE +
Sbjct: 204 TSAEREIVRDIKEKLAYVALDYEQELETAKSSSSVEKSYELPDGQVITIGAERFRCPEVM 263
Query: 551 FQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 372
FQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM KEITALA
Sbjct: 264 FQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALA 323
Query: 371 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 210
PS+MKIK++APPERKYSVWIGGSILASLSTFQQMWIS+ EY+ESGP+IVHRKCF
Sbjct: 324 PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISRAEYEESGPAIVHRKCF 377
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 322 bits (792), Expect = 1e-88
Identities = 150/174 (86%), Positives = 159/174 (91%)
Frame = -2
Query: 731 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 552
TTAEREIVRDIKEKL YVALD+EQE+ TA SSSS+EKSYELPDGQVITIG ERFRCPE L
Sbjct: 203 TTAEREIVRDIKEKLAYVALDYEQELDTARSSSSIEKSYELPDGQVITIGAERFRCPEVL 262
Query: 551 FQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 372
FQPSF+GMEA GIHE TYNSIMKCDVDIRKDLY N VLSGG+TM+PGI DRM KEITALA
Sbjct: 263 FQPSFIGMEAPGIHEATYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIGDRMSKEITALA 322
Query: 371 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 210
P +MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVH KCF
Sbjct: 323 PGSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPGIVHMKCF 376
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 320 bits (787), Expect = 5e-88
Identities = 152/177 (85%), Positives = 163/177 (92%), Gaps = 3/177 (1%)
Frame = -2
Query: 731 TTAEREIVRDIKEKLCYVALDFEQEM---ATAASSSSLEKSYELPDGQVITIGNERFRCP 561
TTAEREIVRDIKEKL YVALD+EQE+ A A +SSS+EKSYELPDGQVITIG ERFRCP
Sbjct: 204 TTAEREIVRDIKEKLAYVALDYEQELNAAAAAKNSSSVEKSYELPDGQVITIGAERFRCP 263
Query: 560 EALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 381
E LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM KEIT
Sbjct: 264 EVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIADRMSKEIT 323
Query: 380 ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 210
ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP+IVHRKCF
Sbjct: 324 ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPAIVHRKCF 380
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 318 bits (780), Expect = 4e-87
Identities = 146/174 (83%), Positives = 161/174 (92%)
Frame = -2
Query: 731 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 552
T+AEREIVRDIKEKL YVALD+EQE+ T+ SSSS+EKSYE+PDGQVITIG+ERFRCPE L
Sbjct: 203 TSAEREIVRDIKEKLAYVALDYEQELETSRSSSSVEKSYEMPDGQVITIGSERFRCPEVL 262
Query: 551 FQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 372
FQPS +GME+ GIHE TYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM KEIT+LA
Sbjct: 263 FQPSLVGMESPGIHEATYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIADRMSKEITSLA 322
Query: 371 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 210
PS+MK+K+IAPPERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVH KCF
Sbjct: 323 PSSMKVKVIAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPGIVHMKCF 376
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 313 bits (768), Expect = 1e-85
Identities = 153/188 (81%), Positives = 163/188 (86%), Gaps = 14/188 (7%)
Frame = -2
Query: 731 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 552
TTAEREIVRDIKEKL YVALD+EQE+ A SSSS+EKSYELPDGQVITIG ERFRCPE L
Sbjct: 204 TTAEREIVRDIKEKLAYVALDYEQELEAAKSSSSVEKSYELPDGQVITIGAERFRCPEVL 263
Query: 551 FQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 372
FQPSF+GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM KEITALA
Sbjct: 264 FQPSFIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALA 323
Query: 371 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQ--------------QMWISKQEYDESGP 234
PS+MKIK++APPERKYSVWIGGSILASLSTFQ QMWISK EYDESGP
Sbjct: 324 PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVNLTPTLYEVARMQMWISKGEYDESGP 383
Query: 233 SIVHRKCF 210
+IVHRKCF
Sbjct: 384 AIVHRKCF 391
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 256 bits (626), Expect = 2e-68
Identities = 130/174 (74%), Positives = 139/174 (79%)
Frame = -2
Query: 731 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 552
TTAEREIVRD+KEKL Y+ALDF+QEMATAA+ SS+EKSYELPDGQVITIG ERFRCPE L
Sbjct: 204 TTAEREIVRDVKEKLSYIALDFDQEMATAATGSSVEKSYELPDGQVITIGAERFRCPEVL 263
Query: 551 FQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 372
FQPSF+GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADRM KEITALA
Sbjct: 264 FQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALA 323
Query: 371 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 210
PS+MKIK MWI+K EYDESGPSIVHRKCF
Sbjct: 324 PSSMKIK--------------------------MWIAKAEYDESGPSIVHRKCF 351
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 125 bits (301), Expect = 4e-29
Identities = 69/170 (40%), Positives = 101/170 (59%), Gaps = 14/170 (8%)
Frame = -2
Query: 719 REIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPS 540
R I DIKE +C V E+A A ++ SYELPDGQ I +G +RF+ P+ LF PS
Sbjct: 303 RAIASDIKESVCRVPDTAFDEVAYANVPTT---SYELPDGQTIEVGADRFKIPDILFNPS 359
Query: 539 FL-----------GMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQ 393
M G+ +S+ +CDVDIRK+L ++ +LSGG++ + +R++
Sbjct: 360 LSQTIPGVDGFADSMSVRGLPRMVIDSVNRCDVDIRKELLSSILLSGGSSSILQLKERLE 419
Query: 392 KEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQMWISKQE 252
KE+ + ++K++A ER++SVWIGGSILASL +FQQMW SK +
Sbjct: 420 KEVLEESSGNTRVKVLASGNSVERRFSVWIGGSILASLGSFQQMWFSKAD 469
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 122 bits (295), Expect = 2e-28
Identities = 68/159 (42%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Frame = -2
Query: 665 EQEMATAASSSSLE-KSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSI 489
E +MA A SS + + LPDGQVITI ER+ EALFQP LG+E GI S+
Sbjct: 241 EDQMAFEAIGSSCRPERHTLPDGQVITIEKERYIVGEALFQPHILGLEDYGIVHQLVTSV 300
Query: 488 MKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE------RK 327
+ + L NT+L GGT G DR Q+E L+ S + ++ PPE +
Sbjct: 301 SNVTPEYHRQLLENTMLCGGTASMTGFEDRFQREAN-LSASAICPSLVKPPEYMPENLAR 359
Query: 326 YSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 210
YS W+GG+ILA + Q ++K +YDE+GPSIVH+KCF
Sbjct: 360 YSAWLGGAILAKVVFPQNQHVTKGDYDETGPSIVHKKCF 398
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 106 bits (254), Expect = 2e-23
Identities = 66/187 (35%), Positives = 104/187 (55%), Gaps = 40/187 (21%)
Frame = -2
Query: 728 TAEREIVRDIKEKLCYVAL---------------DFEQEMATAASSSSLEKSYELPDGQV 594
+A+ E VR+IKEKLCY++L D+++E ++ L KSY LPDG+V
Sbjct: 204 SADFETVREIKEKLCYLSLLSHFIELKRENMYSYDYKREYQLGLETTILVKSYTLPDGRV 263
Query: 593 ITIGNERFRCPEALFQPS--------------FLGMEANGIHETTYNSIMKCDVDIRKDL 456
I +G ERF+ PEALF P + +E +G+ + + I + D+D R L
Sbjct: 264 IKVGTERFQAPEALFTPDQYQHNIDKTFVEQELIDVEGDGMADMAFRCIQEMDIDNRMTL 323
Query: 455 YANTVLSGGTTMYPGIADRMQKEI------TALAPS-----TMKIKIIAPPERKYSVWIG 309
Y + VLSGG+TMYPG+ R++KE+ L + ++++I PP RK+ V++G
Sbjct: 324 YQHIVLSGGSTMYPGLPSRLEKEMLDRYLDVVLKGNKDGLKKLRLRIEDPPRRKHMVYLG 383
Query: 308 GSILASL 288
G++LA +
Sbjct: 384 GAVLAGI 390
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 103 bits (248), Expect = 1e-22
Identities = 59/179 (32%), Positives = 90/179 (50%), Gaps = 6/179 (3%)
Frame = -2
Query: 728 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE------LPDGQVITIGNERFR 567
T ++ V+D+ E Y +L E SS S +E L + + + NERF
Sbjct: 251 TYKKGFVKDLDEACRYSSLPANGESVRKDSSDSDRSKFEDKKKPELSQNEFV-LTNERFL 309
Query: 566 CPEALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 387
PE LF P LGM G+ E +I C ++ L+ +L+GG+T++P +R++KE
Sbjct: 310 VPEMLFHPIDLGMNQAGLAECIVRAIQACHPHLQPVLFERIILTGGSTLFPRFTERLEKE 369
Query: 386 ITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 210
+ L P ++KIIA + W GGS+LA F+ M I+K EY+E G R+ F
Sbjct: 370 LRPLVPDDYQVKIIAQEDPILGAWRGGSLLAHRPDFESMCITKSEYEEMGSMRCRRRFF 428
Score = 34.7 bits (76), Expect = 0.077
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -2
Query: 722 EREIVRDIKEKLCYVALDFEQEMATAASSSS---LEKSYELPDG 600
E ++ D KEKLC+V+LD ++ A SS+ SY LPDG
Sbjct: 206 ETLLIDDAKEKLCFVSLDVPGDLRLARLSSNDNPFRCSYILPDG 249
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 103 bits (246), Expect = 2e-22
Identities = 61/173 (35%), Positives = 96/173 (55%), Gaps = 10/173 (5%)
Frame = -2
Query: 710 VRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLG 531
VR IKEKLCYVA D+E E + S E+ T+ ERF+ E LFQP G
Sbjct: 315 VRTIKEKLCYVAADYEAE-----KRKDTQASCEVDGEGWFTLSEERFKTAEILFQPQIGG 369
Query: 530 MEANGIHETTYNSIMKC---DVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTM 360
+ A G+H+ + C +V + Y VLSGG++ PG+++R++KE+ L P+ +
Sbjct: 370 VRAMGLHKAVSLCMDHCYNSEVFGDDNWYKTVVLSGGSSCLPGLSERLEKELRELLPAHI 429
Query: 359 K--IKIIAPPERKYSVWIGGSILASLSTFQQMW-ISKQEYDE----SGPSIVH 222
I++I PP S W G +++++STF + W I K+++ + +GPS V+
Sbjct: 430 SEGIRVIPPPFGTDSAWFGAKMISNVSTFTEAWCIKKKQFRQKTRRNGPSFVN 482
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 81.8 bits (193), Expect = 5e-16
Identities = 54/186 (29%), Positives = 86/186 (46%), Gaps = 23/186 (12%)
Frame = -2
Query: 716 EIVRDIKEKLCYVALDFEQEMATAASS--------SSLEKSYELPDGQVITIGNERFRCP 561
+I R +KE CY + D +E S+++ +P I IG ERF P
Sbjct: 246 DIARRVKEMYCYTSSDIVKEFKKHDKKPDKYIKHWSAIKPKTGVP--YTIDIGYERFLGP 303
Query: 560 EALFQPSFLGME-ANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 384
E F P + + + E + + +D R+DLY N VLSGG+TM+ R+Q +I
Sbjct: 304 EIFFHPEIYSADFSTPLPELIDSCVQSAPIDTRRDLYKNIVLSGGSTMFKDFHKRLQNDI 363
Query: 383 TALAP--------------STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYD 246
+ +++ ++A P + Y+ W GGS+ AS F + +K+EY+
Sbjct: 364 KKIVDERVAATNARHHVEVKPVEVNVVAHPIQSYAAWFGGSVAASNPEFYESCHTKEEYE 423
Query: 245 ESGPSI 228
E G SI
Sbjct: 424 EHGASI 429
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 81.8 bits (193), Expect = 5e-16
Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 2/128 (1%)
Frame = -2
Query: 593 ITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKC--DVDIRKDLYANTVLSGGTTM 420
I+IG ERFRCPE LFQP +G++ GI E S+ + D +++ L + +++GG ++
Sbjct: 575 ISIGIERFRCPEILFQPGMIGIDQAGIDEMVSISLRRLMEDEAVKERLCQSILVTGGCSL 634
Query: 419 YPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDES 240
PG+ R++ I P +K++ + W G + A+ S F + S +Y E
Sbjct: 635 IPGMIPRLESGIRQFRPYLSPLKLVRAADPLIDAWRGAAAFAASSKFGRHTFSLADYREH 694
Query: 239 GPSIVHRK 216
G ++ HRK
Sbjct: 695 GENLFHRK 702
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 76.2 bits (179), Expect = 3e-14
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 23/186 (12%)
Frame = -2
Query: 716 EIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY----ELPDGQVIT--IGNERFRCPEA 555
++ R +KE CY D +E + + + G T IG ERF PE
Sbjct: 277 DVARRVKEMYCYTCSDIVKEFNKHDREPNKYIKHWSGIKPKTGAKYTCDIGYERFLGPEI 336
Query: 554 LFQPSFLGME-ANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITA 378
F P + +H I +D R+ LY N VLSGG+TM+ R+Q+++
Sbjct: 337 FFHPEIYNNDFTTPLHVVIDKCIQSSPIDTRRALYKNIVLSGGSTMFKDFHRRLQRDLKK 396
Query: 377 LAPS----------------TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYD 246
+ + +++ +++ P ++Y+VW GGS+LAS + F + +K EY+
Sbjct: 397 IVDARVLASNARLGGDAKAQPIEVNVVSHPIQRYAVWFGGSVLASTAEFYEACHTKAEYE 456
Query: 245 ESGPSI 228
E G SI
Sbjct: 457 EYGASI 462
>11_06_0115 +
20288220-20288303,20289223-20289706,20290160-20290393,
20291811-20292770,20292931-20293404,20293406-20294664
Length = 1164
Score = 32.7 bits (71), Expect = 0.31
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +3
Query: 156 PPS*GSAVGHHNLKSQRLEALPVYNGGTRLVVLLFRDPHLLEGREGGEDRSTDPYGVLPL 335
PP A HH + S + +P G V + R+ L + D ++D G+L
Sbjct: 273 PPGPSPASNHHFVPSNPCDTVPKLGSGATTVACVPRERDALLAFK--RDITSDHLGLLTS 330
Query: 336 WRSNDLNLHCRW-GESCDFL 392
WR +D + + RW G +C L
Sbjct: 331 WRQDDHDCY-RWRGITCSNL 349
>11_03_0057 +
9375083-9375088,9375904-9376031,9376107-9376166,
9376832-9376892,9377434-9377583,9377667-9377822,
9377905-9378116,9378572-9378673,9378785-9378924,
9379781-9379932
Length = 388
Score = 32.7 bits (71), Expect = 0.31
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = -2
Query: 515 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 336
I E Y I++ ++ ++ T +G MYP D +K+ L K APP
Sbjct: 226 IRELIYRDILEYHPNMLREYLEGTESAG--FMYPSAVDHFKKQFAYLEEHYAKGSTAAPP 283
Query: 335 ERKYSVWIGGSILAS 291
ER+++ S+L S
Sbjct: 284 ERQHNSLPRPSVLYS 298
>02_01_0567 -
4168164-4168250,4168672-4168828,4168951-4169090,
4170318-4170456,4170562-4170830,4170914-4171000,
4171259-4171327,4171427-4171455,4171544-4171950,
4172906-4172977,4173150-4173221,4173299-4173370,
4173454-4173519,4173717-4173785,4173866-4173995,
4174846-4174975
Length = 664
Score = 32.7 bits (71), Expect = 0.31
Identities = 23/61 (37%), Positives = 30/61 (49%)
Frame = -3
Query: 718 GKSFVTSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPH 539
G F TS A+ ST + P P++PS S T P+ SSPS + R SS+P
Sbjct: 207 GNPFNTSIAPSASPSSTPTGSTPTQTPSSPSSSGT--PSPSSSPSNSSGGSTARDSSSPS 264
Query: 538 S 536
S
Sbjct: 265 S 265
>02_03_0121 +
15468894-15468906,15469008-15469193,15474157-15474650,
15475090-15475521,15475597-15475821,15476065-15476346,
15476432-15476704,15477680-15477805,15481010-15481288,
15481313-15481588,15481670-15482113,15482200-15482397,
15482574-15482732,15482832-15483085,15483164-15483316,
15483395-15483683,15483769-15483807,15483913-15483951
Length = 1386
Score = 31.9 bits (69), Expect = 0.54
Identities = 20/69 (28%), Positives = 32/69 (46%)
Frame = -3
Query: 703 TSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPHSWVWK 524
T + +T +T+S PPL P PS + ++ + S A + P + +
Sbjct: 115 TEPTAASTEHATASPAQPPLTPVTPSTE-PGAAAIEAAAA-ANSSFADSSLAEPEAAATE 172
Query: 523 PTASTKPHT 497
PTAST+P T
Sbjct: 173 PTASTEPRT 181
>02_02_0520 +
11152718-11153600,11153736-11153917,11154160-11154249,
11154343-11154627,11154776-11154994,11155112-11155339
Length = 628
Score = 31.9 bits (69), Expect = 0.54
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = -2
Query: 665 EQEMATAASSSSLEKSY-ELPDGQ-VITIGNERFRCPEAL 552
E E++ A +K Y +L G+ V+++GNE+FRCP L
Sbjct: 7 ESELSDADIDDYADKCYMDLKSGKPVVSLGNEKFRCPFCL 46
>05_01_0311 +
2452230-2452232,2452401-2452809,2454136-2454263,
2455287-2455436,2455526-2455681,2455775-2455986,
2456306-2456407,2456517-2456653,2456769-2457055
Length = 527
Score = 31.5 bits (68), Expect = 0.71
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = -2
Query: 515 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 336
I E Y I++ + ++ T +G MYP D +K+ L K APP
Sbjct: 321 IRELIYREILEYHPKMLREFLEGTESTG--FMYPSAVDHFKKQFAYLEEHYAKGSTAAPP 378
Query: 335 ERKYS 321
ER+++
Sbjct: 379 ERQHN 383
>04_03_1017 + 21747044-21748051
Length = 335
Score = 31.5 bits (68), Expect = 0.71
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Frame = -3
Query: 730 PPPSGKSFVTS---RRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQ 560
PPPS S RR+ + + S PP A+P S + P +SP T +S +
Sbjct: 57 PPPSPDYTPASPPHRRAASPDYTPES---PPRRAASPDYSPASPPRRAASPDYTPESPPR 113
Query: 559 RLSSNPHSWVWKPTASTKPHTTPS 488
R +S +S P + P TP+
Sbjct: 114 RAASPDYSPESPPRRAASPDYTPA 137
Score = 31.5 bits (68), Expect = 0.71
Identities = 21/70 (30%), Positives = 33/70 (47%)
Frame = -3
Query: 697 RRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPHSWVWKPT 518
RR+ + S S+ PP A+P S + P +SP T S +R +S ++ + P
Sbjct: 200 RRAASPDYSPST---PPRRAASPDYSPSTPPRRAASPDYTPMSPPRRAASPDYTQMTPPR 256
Query: 517 ASTKPHTTPS 488
+ P TPS
Sbjct: 257 RAASPDYTPS 266
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = -3
Query: 700 SRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPHSWVWKP 521
SRR+ A+S + P A+P S + P +SP + + +R +S +S P
Sbjct: 168 SRRAAASSPDYTPESPPRRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYSPSTPP 227
Query: 520 TASTKPHTTP 491
+ P TP
Sbjct: 228 RRAASPDYTP 237
>07_01_1204 - 11469953-11470618
Length = 221
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +3
Query: 177 VGHHNLKSQRLEALPVYNGGTRLVVLLFRDPHLLEGREGGE 299
VGH L++QRL A + GGTRL + L P + GR G E
Sbjct: 179 VGHGGLRAQRLGAQSIGQGGTRLGLAL---PAGIAGRGGLE 216
>01_06_0628 +
30707353-30707548,30707846-30707958,30708090-30708197,
30708305-30708543,30708774-30708861,30708942-30709075,
30709285-30709498,30709671-30709759,30710194-30710262,
30710560-30710683
Length = 457
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 564 ATESFVSDGD-DLTVGKFVRLLEGAAGCSGGHLLLEVESDVAQLLL 698
A E F + D D++VG L AAGC GG ++ + V Q+LL
Sbjct: 262 APELFGCENDIDISVGT----LSKAAGCQGGFIVCRISETVGQILL 303
>09_06_0375 - 22653366-22657112,22657185-22658457,22658833-22659539
Length = 1908
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/49 (24%), Positives = 20/49 (40%)
Frame = -3
Query: 658 RWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPHSWVWKPTAS 512
RWPP +R L + + +A R++ +W W P+ S
Sbjct: 232 RWPPRGGVRHNRMLEKIASKEPQTTAELFQLADRVARKEEAWTWNPSGS 280
>06_03_1248 + 28685911-28687719
Length = 602
Score = 29.5 bits (63), Expect = 2.9
Identities = 28/84 (33%), Positives = 36/84 (42%)
Frame = -3
Query: 730 PPPSGKSFVTSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLS 551
PP S +S T+RRS T+ S+S + P S SL S S + S + LS
Sbjct: 22 PPSSPRSSDTTRRSSFTAASSSDKPVPSFLRPTVSSSL-------HSSSSSSPSSSSLLS 74
Query: 550 SNPHSWVWKPTASTKPHTTPS*SA 479
S+P S T PS SA
Sbjct: 75 SSPSSKGTGTTPRRSADKAPSASA 98
>08_02_0238 + 14665813-14668798,14669088-14669125
Length = 1007
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +3
Query: 306 STDPYGVLPLWRSNDLNLHCRW-GESC 383
S DP G L W+ ND CRW G +C
Sbjct: 62 SNDPGGFLGSWKQNDSIGFCRWPGVTC 88
>01_06_1118 -
34636919-34637031,34637032-34637082,34637250-34637287,
34637344-34637468,34637552-34637714,34638910-34639083,
34639161-34639426
Length = 309
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -3
Query: 697 RRSCATSLSTSSRRWPPLHPAAPSRSLT-NFPTVRSSPSETKDSVAQR 557
R CA ++++ R LHP+ S L+ +FPT S PS S +Q+
Sbjct: 31 RDLCALAIASRRLRRLSLHPSLWSALLSRDFPTQSSQPSSASSSSSQQ 78
>06_03_0559 +
22148773-22149210,22149478-22149684,22150065-22150471,
22150655-22151472,22151564-22151674,22151846-22152015
Length = 716
Score = 28.7 bits (61), Expect = 5.0
Identities = 25/68 (36%), Positives = 33/68 (48%)
Frame = -2
Query: 521 NGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIA 342
N +ET+ N + CD D+R VLSG +PG A M+ + A ST K +
Sbjct: 571 NRHNETSQNVLAVCDFDMR----FTFVLSG----WPGSAHDMR--VFKDAVSTYHHKFLH 620
Query: 341 PPERKYSV 318
PP KY V
Sbjct: 621 PPSGKYYV 628
>11_02_0059 -
7883980-7884141,7884423-7884467,7884629-7884715,
7885746-7885874,7885995-7886151,7886248-7886350,
7887050-7887103,7887334-7887451,7888549-7888700,
7890166-7891852
Length = 897
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +2
Query: 449 WRTSPYGCPRRTS*WSCMWFRGCRWLPYPRMRVGREPLGNGIF 577
W +SP G T C WLP PR G + LG+ IF
Sbjct: 233 WLSSPSGEVPGTCSTKCTNEASVNWLPSPREERGVDLLGDEIF 275
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 28.3 bits (60), Expect = 6.6
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = -3
Query: 724 PSGKSFVTSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSS- 548
P+ S+ + S + + + S P P +PS S T+ +SPS + S +S
Sbjct: 1594 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSP 1653
Query: 547 --NPHSWVWKPTASTKPHTTPS*SAT 476
+P S + PT+ + T+PS S T
Sbjct: 1654 AYSPTSPAYSPTSPSYSPTSPSYSPT 1679
Score = 27.9 bits (59), Expect = 8.8
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = -3
Query: 724 PSGKSFVTSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSS- 548
P+ S+ + + + + S P P +PS S T+ +SPS + S + +S
Sbjct: 1580 PTSPSYTPGSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1639
Query: 547 --NPHSWVWKPTASTKPHTTPS*SAT 476
+P S V+ PT+ T+P+ S T
Sbjct: 1640 SYSPTSPVYSPTSPAYSPTSPAYSPT 1665
>04_03_0830 -
20125827-20125913,20126262-20126357,20126974-20127053,
20127124-20127220,20127457-20127544,20128491-20128576,
20129358-20130530
Length = 568
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = -3
Query: 730 PPPSGKSFVTSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQR 557
PPP+ S T A S+SS PLHP+A + + P + + SVA R
Sbjct: 74 PPPASASSSTPTSHVAAESSSSSL---PLHPSAAAAARKVIPASAAGGLKRSKSVAPR 128
>03_02_0609 -
9823120-9823573,9823903-9824102,9824240-9824335,
9824454-9824567,9824711-9824774,9825206-9825312
Length = 344
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -3
Query: 724 PSGKSFVTSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVA 563
P G+ RRS + S S S RR + PAA + P R SP +D V+
Sbjct: 205 PRGRRDRDDRRSRSLSYSRSPRR--SISPAANGKERNPSPNGRRSPRSPQDRVS 256
>07_03_0496 - 18758767-18760113
Length = 448
Score = 27.9 bits (59), Expect = 8.8
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +3
Query: 510 VDAVGFHTQE*GLEESLWATESFVSDGDDLTVGKFVRLLEGAAGCSGGHLLLEVESDVAQ 689
+D VG Q E+ +W T + +GDD V LLE SG L++ E +A
Sbjct: 294 IDDVGHQWQYLTGEDLIWKTTKYELEGDDYAVNGSWHLLES----SGRLLMVRRECLIAA 349
Query: 690 LLLD 701
+ D
Sbjct: 350 FVKD 353
>04_03_0624 - 18115559-18115725,18115993-18116872
Length = 348
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -3
Query: 265 SRNRSTTSLVPPLYTGSASKR*DFKL*CPTAEPQEGGSNYAC 140
S+N ST+S Y G A R D+ + T E +NY+C
Sbjct: 213 SKNYSTSSAFNDYYGGQAPLRVDWAIGNKTCEEARHQANYSC 254
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,776,523
Number of Sequences: 37544
Number of extensions: 518243
Number of successful extensions: 1886
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1854
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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