Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13o16
(732 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 359 1e-99
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 359 1e-99
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 359 1e-99
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 359 1e-99
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 359 1e-99
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 359 1e-99
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 358 3e-99
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 358 3e-99
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 358 3e-99
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 352 2e-97
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 338 2e-93
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 172 2e-43
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 160 8e-40
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 121 6e-28
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 107 1e-23
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 99 2e-21
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 76 3e-14
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 76 3e-14
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 9e-06
AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical... 33 0.28
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 32 0.48
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 32 0.48
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.64
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.64
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.64
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 31 0.64
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 31 0.64
AF039044-7|AAG24125.1| 125|Caenorhabditis elegans Hypothetical ... 31 0.84
AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical ... 31 0.84
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 30 1.5
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 30 1.5
AF026202-2|AAB71242.2| 501|Caenorhabditis elegans Hypothetical ... 29 2.6
Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 28 5.9
L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical pr... 28 7.8
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 359 bits (882), Expect = 1e-99
Identities = 169/174 (97%), Positives = 173/174 (99%)
Frame = -2
Query: 731 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 552
TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEAL
Sbjct: 203 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAL 262
Query: 551 FQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 372
FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALA
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 371 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 210
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 359 bits (882), Expect = 1e-99
Identities = 169/174 (97%), Positives = 173/174 (99%)
Frame = -2
Query: 731 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 552
TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEAL
Sbjct: 203 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAL 262
Query: 551 FQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 372
FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALA
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 371 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 210
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 359 bits (882), Expect = 1e-99
Identities = 169/174 (97%), Positives = 173/174 (99%)
Frame = -2
Query: 731 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 552
TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEAL
Sbjct: 203 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAL 262
Query: 551 FQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 372
FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALA
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 371 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 210
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 359 bits (882), Expect = 1e-99
Identities = 169/174 (97%), Positives = 173/174 (99%)
Frame = -2
Query: 731 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 552
TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEAL
Sbjct: 159 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAL 218
Query: 551 FQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 372
FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALA
Sbjct: 219 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 278
Query: 371 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 210
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 279 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 359 bits (882), Expect = 1e-99
Identities = 169/174 (97%), Positives = 173/174 (99%)
Frame = -2
Query: 731 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 552
TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEAL
Sbjct: 189 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAL 248
Query: 551 FQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 372
FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALA
Sbjct: 249 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 308
Query: 371 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 210
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 309 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 359 bits (882), Expect = 1e-99
Identities = 169/174 (97%), Positives = 173/174 (99%)
Frame = -2
Query: 731 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 552
TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEAL
Sbjct: 203 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAL 262
Query: 551 FQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 372
FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALA
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 371 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 210
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 358 bits (880), Expect = 3e-99
Identities = 168/174 (96%), Positives = 173/174 (99%)
Frame = -2
Query: 731 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 552
TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+
Sbjct: 203 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAM 262
Query: 551 FQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 372
FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALA
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 371 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 210
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 358 bits (880), Expect = 3e-99
Identities = 168/174 (96%), Positives = 173/174 (99%)
Frame = -2
Query: 731 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 552
TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+
Sbjct: 203 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAM 262
Query: 551 FQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 372
FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALA
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 371 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 210
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 358 bits (880), Expect = 3e-99
Identities = 168/174 (96%), Positives = 173/174 (99%)
Frame = -2
Query: 731 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 552
TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+
Sbjct: 203 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAM 262
Query: 551 FQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 372
FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALA
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 371 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 210
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 352 bits (865), Expect = 2e-97
Identities = 167/174 (95%), Positives = 172/174 (98%)
Frame = -2
Query: 731 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 552
TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+
Sbjct: 203 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAM 262
Query: 551 FQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 372
FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALA
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 371 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 210
P TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 P-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 338 bits (832), Expect = 2e-93
Identities = 160/174 (91%), Positives = 165/174 (94%)
Frame = -2
Query: 731 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 552
TTAEREIVRDIKEKLCYVA DFE E+A AASSSSLEKSYELPDGQVITIGNERFRCPE L
Sbjct: 202 TTAEREIVRDIKEKLCYVAHDFESELAAAASSSSLEKSYELPDGQVITIGNERFRCPEVL 261
Query: 551 FQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 372
FQP+F+GME GIHETTY SIMKCDVDIRKDLYANTVLSGGT+M+PGIADRMQKEI LA
Sbjct: 262 FQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQKEIQHLA 321
Query: 371 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 210
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 322 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 172 bits (419), Expect = 2e-43
Identities = 83/171 (48%), Positives = 113/171 (66%)
Frame = -2
Query: 722 EREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQP 543
E EIVR++KE CY+ALD T ++S++ SY LPD I I N FR PE LF+P
Sbjct: 209 EFEIVREMKENACYLALD-----PTKVENNSVKSSYALPDTTKIEISNSLFRAPEVLFKP 263
Query: 542 SFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPST 363
+G E G+ SIMKCDVD+R+ LY+N VLSGGTT++ G DR+ E+ +AP+
Sbjct: 264 DLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIAPAD 323
Query: 362 MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 210
KI+I A ER WIGGSI+ASL TF++MW+ K+EY++ G S +H++ F
Sbjct: 324 GKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 160 bits (389), Expect = 8e-40
Identities = 81/177 (45%), Positives = 110/177 (62%), Gaps = 13/177 (7%)
Frame = -2
Query: 728 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALF 549
+A+ E VR +KEKLCY+A D EQE A ++ L + Y LPDG+VI +G ERF PE LF
Sbjct: 207 SADFETVRQMKEKLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILF 266
Query: 548 QPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-- 375
QP + +E G+ E + I D+D R D Y + VLSGGTTMYPG+ R++KE+ L
Sbjct: 267 QPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQLYL 326
Query: 374 ---------APSTMKIKIIAPPERKYSVWIGGSILASL--STFQQMWISKQEYDESG 237
A KI+I APP RK+ V++GG++LA+L Q W+SK+EY+E G
Sbjct: 327 DRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 121 bits (291), Expect = 6e-28
Identities = 60/143 (41%), Positives = 81/143 (56%), Gaps = 8/143 (5%)
Frame = -2
Query: 617 YELPDGQVITIGNERFRCPEALFQPSFLGMEANG-----IHETTYNSIMKCDVDIRKDLY 453
Y P+G G ER + PE LF +L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 452 ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLST 282
+N ++GG ++ G +R+ + P T+K+++ A P ERKY WIGGSIL SL T
Sbjct: 353 SNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGT 412
Query: 281 FQQMWISKQEYDESGPSIVHRKC 213
FQQMW+SK EYDESG SIV +KC
Sbjct: 413 FQQMWVSKAEYDESGKSIVEKKC 435
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 107 bits (256), Expect = 1e-23
Identities = 53/160 (33%), Positives = 94/160 (58%), Gaps = 3/160 (1%)
Frame = -2
Query: 722 EREIVRDIKEKLCYVALDFEQEMATAASSS--SLEKSYELPDGQV-ITIGNERFRCPEAL 552
E+ I+R E+ YV D+++E + + SL+ P Q I N RF C E L
Sbjct: 380 EKLILRFALEQTTYVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSRFLCTEGL 439
Query: 551 FQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 372
F+P G++ G+H+ + +I++C +D R+ LY N L+GG ++ PGIA+++++E++ +
Sbjct: 440 FKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQELSTVV 499
Query: 371 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 252
P+T+ ++ P R + ++G I+AS STF+ IS Q+
Sbjct: 500 PNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 99 bits (238), Expect = 2e-21
Identities = 62/186 (33%), Positives = 97/186 (52%), Gaps = 23/186 (12%)
Frame = -2
Query: 716 EIVRDIKEKLCYVALDFEQEMATA-ASSSSLEKSYELPDGQV-----ITIGNERFRCPEA 555
E+ + IKEK CYV D +E ++ ++Y+ + + +G ERF PE
Sbjct: 229 EVAKMIKEKFCYVCPDVMKEFVKYDTDAAKWLRTYDGINSITKKPFNVDVGYERFLGPEI 288
Query: 554 LFQPSFLGME-ANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITA 378
F P F E I +T I +C +D+R+ LY N VLSGG+TM+ A ++Q+++
Sbjct: 289 FFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRDVKR 348
Query: 377 LA----------------PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYD 246
L+ P + +++I+ ++Y+VW GGS+LAS S F Q+ +K EY
Sbjct: 349 LSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYM 408
Query: 245 ESGPSI 228
E GPSI
Sbjct: 409 ERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 75.8 bits (178), Expect = 3e-14
Identities = 52/190 (27%), Positives = 96/190 (50%), Gaps = 25/190 (13%)
Frame = -2
Query: 722 EREIVRDIKEKLCYVALDFEQEMATAAS---SSSLEKSYELPD------GQV-------- 594
E ++ + KE LC+V+ +F++ M A + ++ K Y +PD G V
Sbjct: 198 ETYVINECKEDLCFVSQNFDESMKEARNRFQENTTMKRYIMPDFHSTFRGVVKDVKEPHD 257
Query: 593 -----ITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGG 429
I +G ERF PE LF PS + ++ G+ E SI +C +R L N ++ GG
Sbjct: 258 PQIPSIHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGG 317
Query: 428 TTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISK 258
++ +PG +R+++E+ ++ P+ + + + P+ W G L L+ + WI++
Sbjct: 318 SSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINR 373
Query: 257 QEYDESGPSI 228
+++DE G S+
Sbjct: 374 KDWDERGDSL 383
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 75.8 bits (178), Expect = 3e-14
Identities = 52/190 (27%), Positives = 96/190 (50%), Gaps = 25/190 (13%)
Frame = -2
Query: 722 EREIVRDIKEKLCYVALDFEQEMATAAS---SSSLEKSYELPD------GQV-------- 594
E ++ + KE LC+V+ +F++ M A + ++ K Y +PD G V
Sbjct: 198 ETYVINECKEDLCFVSQNFDESMKEARNRFQGNTTMKRYIMPDFHSTFRGVVKDVKEPHD 257
Query: 593 -----ITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGG 429
I +G ERF PE LF PS + ++ G+ E SI +C +R L N ++ GG
Sbjct: 258 PQIPSIHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGG 317
Query: 428 TTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISK 258
++ +PG +R+++E+ ++ P+ + + + P+ W G L L+ + WI++
Sbjct: 318 SSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINR 373
Query: 257 QEYDESGPSI 228
+++DE G S+
Sbjct: 374 KDWDERGDSL 383
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 47.6 bits (108), Expect = 9e-06
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Frame = -2
Query: 491 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK 327
+ KC +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257
Query: 326 ----YSVWIGGSILASL-STFQQMWISKQEY 249
+ W+G S+L SL T ++ ++ +E+
Sbjct: 258 NTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical
protein Y69A2AR.14 protein.
Length = 555
Score = 32.7 bits (71), Expect = 0.28
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Frame = -3
Query: 724 PSGKSFVTSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETK---DSVAQRL 554
P+ T+ S T+ STS+ + P P P+ T+ PT+ PS + + L
Sbjct: 234 PTCPKNATAVASVTTTASTSTTKTSPTKPPTPTSRPTSAPTIPPQPSANSTRAPDIGKTL 293
Query: 553 SSNPHSWVWKPTASTKPHTTP 491
S+ P P + +PH P
Sbjct: 294 STQP------PRRTPQPHPKP 308
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 31.9 bits (69), Expect = 0.48
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Frame = -3
Query: 724 PSGKSFVTSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSS- 548
P+ S+ + S + + + S P P +PS S T+ SSPS + S + SS
Sbjct: 1614 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSP 1673
Query: 547 --NPHSWVWKPTASTKPHTTPS*SAT 476
+P S + PT+ T T+P+ S T
Sbjct: 1674 RYSPTSPTYSPTSPTYSPTSPTYSPT 1699
Score = 28.7 bits (61), Expect = 4.5
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = -3
Query: 724 PSGKSFVTSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSS- 548
P S+ + S + + + S P P +PS S T+ +SPS + S + SS
Sbjct: 1607 PVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSP 1666
Query: 547 --NPHSWVWKPTASTKPHTTPS*SAT 476
+P S + PT+ T T+P+ S T
Sbjct: 1667 SYSPSSPRYSPTSPTYSPTSPTYSPT 1692
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 31.9 bits (69), Expect = 0.48
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Frame = -3
Query: 724 PSGKSFVTSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSS- 548
P+ S+ + S + + + S P P +PS S T+ SSPS + S + SS
Sbjct: 1621 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSP 1680
Query: 547 --NPHSWVWKPTASTKPHTTPS*SAT 476
+P S + PT+ T T+P+ S T
Sbjct: 1681 RYSPTSPTYSPTSPTYSPTSPTYSPT 1706
Score = 28.7 bits (61), Expect = 4.5
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = -3
Query: 724 PSGKSFVTSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSS- 548
P S+ + S + + + S P P +PS S T+ +SPS + S + SS
Sbjct: 1614 PVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSP 1673
Query: 547 --NPHSWVWKPTASTKPHTTPS*SAT 476
+P S + PT+ T T+P+ S T
Sbjct: 1674 SYSPSSPRYSPTSPTYSPTSPTYSPT 1699
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.64
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 315 PYGVLPLWRSNDLNLHCRWGESCD 386
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.64
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 315 PYGVLPLWRSNDLNLHCRWGESCD 386
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.64
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 315 PYGVLPLWRSNDLNLHCRWGESCD 386
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 31.5 bits (68), Expect = 0.64
Identities = 22/79 (27%), Positives = 35/79 (44%)
Frame = -3
Query: 712 SFVTSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPHSW 533
S VTS +T++ T++ A S S + T ++PS + + S+N S
Sbjct: 261 SIVTSTTVTSTTVPTTTVVTTVPTTTATSTSTSTASTTTTTPSTSTHTTTVTYSTNATSS 320
Query: 532 VWKPTASTKPHTTPS*SAT 476
PT S P P+ +AT
Sbjct: 321 TTSPTTSPTPEPEPTTTAT 339
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 31.5 bits (68), Expect = 0.64
Identities = 22/79 (27%), Positives = 35/79 (44%)
Frame = -3
Query: 712 SFVTSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPHSW 533
S VTS +T++ T++ A S S + T ++PS + + S+N S
Sbjct: 243 SIVTSTTVTSTTVPTTTVVTTVPTTTATSTSTSTASTTTTTPSTSTHTTTVTYSTNATSS 302
Query: 532 VWKPTASTKPHTTPS*SAT 476
PT S P P+ +AT
Sbjct: 303 TTSPTTSPTPEPEPTTTAT 321
>AF039044-7|AAG24125.1| 125|Caenorhabditis elegans Hypothetical
protein F48G7.9 protein.
Length = 125
Score = 31.1 bits (67), Expect = 0.84
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -3
Query: 703 TSRRSCATSLSTSSRRWPPLHPAAPS 626
+SRRS S+STS++ WP +APS
Sbjct: 80 SSRRSSLASVSTSTKNWPSKSSSAPS 105
>AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical
protein Y41D4B.18 protein.
Length = 338
Score = 31.1 bits (67), Expect = 0.84
Identities = 23/83 (27%), Positives = 35/83 (42%)
Frame = -3
Query: 724 PSGKSFVTSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSN 545
P+ S + S S ST + P AP+ S TN PT +SP + V+ SS
Sbjct: 227 PTTTSTAYAAPSSTASTSTPAPTNLPTTTGAPTNSTTNPPTA-TSPKTSSQPVSSSTSST 285
Query: 544 PHSWVWKPTASTKPHTTPS*SAT 476
P +++P T +A+
Sbjct: 286 SSPAPTNPPTTSRPTTASQSTAS 308
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/71 (30%), Positives = 32/71 (45%)
Frame = -3
Query: 724 PSGKSFVTSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSN 545
PSG S +S +S + S P + AP S ++FP+ S+P + S SSN
Sbjct: 544 PSGSSDSSSSELPNSSTDSGSTSEPSMSSEAPGASSSDFPS--STPDSSVSSEEPNASSN 601
Query: 544 PHSWVWKPTAS 512
S P +S
Sbjct: 602 SVSTETSPGSS 612
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/71 (30%), Positives = 32/71 (45%)
Frame = -3
Query: 724 PSGKSFVTSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSN 545
PSG S +S +S + S P + AP S ++FP+ S+P + S SSN
Sbjct: 544 PSGSSDSSSSELPNSSTDSGSTSEPSMSSEAPGASSSDFPS--STPDSSVSSEEPNASSN 601
Query: 544 PHSWVWKPTAS 512
S P +S
Sbjct: 602 SVSTETSPGSS 612
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/71 (30%), Positives = 32/71 (45%)
Frame = -3
Query: 724 PSGKSFVTSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSN 545
PSG S +S +S + S P + AP S ++FP+ S+P + S SSN
Sbjct: 544 PSGSSDSSSSELPNSSTDSGSTSEPSMSSEAPGASSSDFPS--STPDSSVSSEEPNASSN 601
Query: 544 PHSWVWKPTAS 512
S P +S
Sbjct: 602 SVSTETSPGSS 612
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/71 (30%), Positives = 32/71 (45%)
Frame = -3
Query: 724 PSGKSFVTSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSN 545
PSG S +S +S + S P + AP S ++FP+ S+P + S SSN
Sbjct: 544 PSGSSDSSSSELPNSSTDSGSTSEPSMSSEAPGASSSDFPS--STPDSSVSSEEPNASSN 601
Query: 544 PHSWVWKPTAS 512
S P +S
Sbjct: 602 SVSTETSPGSS 612
>AF026202-2|AAB71242.2| 501|Caenorhabditis elegans Hypothetical
protein C10E2.2 protein.
Length = 501
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -3
Query: 661 RRWPPLHPAAPSRSLTNFPTVRSSPSE 581
R+ PLHPA P L N P SSP+E
Sbjct: 144 RQRDPLHPAHPLLPLRNMPYDSSSPTE 170
>Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical
protein K08E3.4 protein.
Length = 643
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = -3
Query: 667 SSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPHSWVWKPTA 515
S ++WPP+ +P R N T P E + ++ P V+KP A
Sbjct: 406 SPKKWPPVGTTSPPREPVNRLT---EPDEPSTYTPKPIAYEPEPMVYKPEA 453
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical protein
T01D3.7 protein.
Length = 2882
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = -3
Query: 622 SLTNFPTVRSSPSETKDSVAQRLSSNPHSWVWKPTASTKPHTTPS*SATW 473
S T+ T + SET + + +S P +W +++P T P ++TW
Sbjct: 2501 SETSTSTSSQTVSETDGTTSMFQTSEPSTWQTSNEPTSEPTTVPLETSTW 2550
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.3 bits (60), Expect = 5.9
Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Frame = -3
Query: 721 SGKSFVTSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSET-KDSVAQRLSSN 545
S S + + S STS APS S T + S+PS T SV+ SS
Sbjct: 466 SSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASST 525
Query: 544 PHSW-VWKPTASTKPHTTPS*SAT 476
S + + +TK TT S T
Sbjct: 526 QSSTSTQQSSTTTKSETTTSSDGT 549
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.3 bits (60), Expect = 5.9
Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Frame = -3
Query: 721 SGKSFVTSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSET-KDSVAQRLSSN 545
S S + + S STS APS S T + S+PS T SV+ SS
Sbjct: 466 SSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASST 525
Query: 544 PHSW-VWKPTASTKPHTTPS*SAT 476
S + + +TK TT S T
Sbjct: 526 QSSTSTQQSSTTTKSETTTSSDGT 549
>L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical protein
F44E2.4 protein.
Length = 1283
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -3
Query: 622 SLTNFPTVRSSPSETKDSVAQRLSSNPHSWVWKPTASTKPHTTP 491
+L N + SP TKDS + ++ S KP TK TTP
Sbjct: 1198 NLFNASCILESPEPTKDSTSIDVNEVEPSRDQKPVVVTKDETTP 1241
>Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical
protein K02B12.5 protein.
Length = 1204
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = -3
Query: 712 SFVTSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPS 584
S +TS+R + S+SS P + +P RS++ TVRS+PS
Sbjct: 761 SLITSKRVQRQN-SSSSLTSNPRNSISPRRSISPTTTVRSAPS 802
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,339,885
Number of Sequences: 27780
Number of extensions: 384637
Number of successful extensions: 1363
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1343
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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